RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 PYY3Q5JQD4 70 aa4.53□□□□□ -1.69
COPB1-211ENST00000534234 TRACP01848 142 aa4.52□□□□□ -1.69
COPB1-211ENST00000534234 NOTCH2NLQ7Z3S9 236 aa4.52□□□□□ -1.69
COPB1-211ENST00000534234 LINC00472Q9H8W2 130 aa4.52□□□□□ -1.69
COPB1-211ENST00000534234 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
COPB1-211ENST00000534234 IGHV6-1A0A0B4J1U7 121 aa4.5□□□□□ -1.69
COPB1-211ENST00000534234 UBE2V1Q13404 147 aa4.5□□□□□ -1.69
COPB1-211ENST00000534234 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
COPB1-211ENST00000534234 FAM236DA0A1B0GTK5 79 aa4.48□□□□□ -1.69
COPB1-211ENST00000534234 SCGB1C2P0DMR2 95 aa4.48□□□□□ -1.69
COPB1-211ENST00000534234 FAM236CP0DP71 79 aa4.48□□□□□ -1.69
COPB1-211ENST00000534234 VPS25Q9BRG1 176 aa4.48□□□□□ -1.69
COPB1-211ENST00000534234 UQCR10Q9UDW1 63 aa4.48□□□□□ -1.69
COPB1-211ENST00000534234 RBM3P98179 157 aaKnown RBP4.48□□□□□ -1.69
COPB1-211ENST00000534234 DSCR8Q96T75 97 aa4.47□□□□□ -1.69
COPB1-211ENST00000534234 RBM12B-AS1Q9P1G2 102 aa4.47□□□□□ -1.69
COPB1-211ENST00000534234 HRES1P13985 223 aa4.46□□□□□ -1.7
COPB1-211ENST00000534234 MPLKIPQ8TAP9 179 aa4.46□□□□□ -1.7
COPB1-211ENST00000534234 A0A1B0GVX0 72 aa4.45□□□□□ -1.7
COPB1-211ENST00000534234 C8orf87E5RJ46 101 aa4.45□□□□□ -1.7
COPB1-211ENST00000534234 BAALC-AS2P0C853 105 aa4.45□□□□□ -1.7
COPB1-211ENST00000534234 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
COPB1-211ENST00000534234 C9orf118A6NHY6 69 aa4.44□□□□□ -1.7
COPB1-211ENST00000534234 C9JAW5 83 aa4.44□□□□□ -1.7
COPB1-211ENST00000534234 J3KT08 172 aa4.43□□□□□ -1.7
COPB1-211ENST00000534234 MT2AP02795 61 aa4.43□□□□□ -1.7
COPB1-211ENST00000534234 Q6ZQT0 140 aa4.42□□□□□ -1.7
COPB1-211ENST00000534234 ZCCHC13Q8WW36 166 aaKnown RBP4.41□□□□□ -1.7
COPB1-211ENST00000534234 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
COPB1-211ENST00000534234 NDUFB1O75438 58 aa4.4□□□□□ -1.7
COPB1-211ENST00000534234 MTURNQ8N3F0 131 aa4.4□□□□□ -1.7
COPB1-211ENST00000534234 SPINK7P58062 85 aa4.4□□□□□ -1.71
COPB1-211ENST00000534234 KRTAP9-7A8MTY7 169 aa4.39□□□□□ -1.71
COPB1-211ENST00000534234 MT1FP04733 61 aa4.39□□□□□ -1.71
COPB1-211ENST00000534234 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
COPB1-211ENST00000534234 JMJD7-PLA2G4BH0Y9G9 81 aa4.38□□□□□ -1.71
COPB1-211ENST00000534234 ATXN8Q156A1 80 aa4.38□□□□□ -1.71
COPB1-211ENST00000534234 Q8N9P0 234 aaPredicted RBP4.38□□□□□ -1.71
COPB1-211ENST00000534234 A0A1B0GW54 56 aa4.37□□□□□ -1.71
COPB1-211ENST00000534234 NAA38Q9BRA0 125 aaKnown RBP4.37□□□□□ -1.71
COPB1-211ENST00000534234 USH2AO75445 5202 aa4.37□□□□□ -1.71
COPB1-211ENST00000534234 A8MWP4 228 aa4.36□□□□□ -1.71
COPB1-211ENST00000534234 M0R143 59 aa4.36□□□□□ -1.71
COPB1-211ENST00000534234 LYRM7Q5U5X0 104 aa4.36□□□□□ -1.71
COPB1-211ENST00000534234 KRTAP9-3Q9BYQ3 159 aa4.36□□□□□ -1.71
COPB1-211ENST00000534234 C8orf17Q9NRJ1 99 aa4.36□□□□□ -1.71
COPB1-211ENST00000534234 LOC110117498A0A087WWA1 95 aa4.36□□□□□ -1.71
COPB1-211ENST00000534234 PDE6GP18545 87 aa4.36□□□□□ -1.71
COPB1-211ENST00000534234 IGKV3D-7A0A0C4DH55 119 aa4.35□□□□□ -1.71
COPB1-211ENST00000534234 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
COPB1-211ENST00000534234 C14orf132Q9NPU4 83 aa4.34□□□□□ -1.71
COPB1-211ENST00000534234 SSPOA2VEC9 5147 aa4.33□□□□□ -1.72
COPB1-211ENST00000534234 Q6ZVQ6 151 aa4.33□□□□□ -1.72
COPB1-211ENST00000534234 NREPQ16612 68 aa4.32□□□□□ -1.72
COPB1-211ENST00000534234 WFDC13Q8IUB5 93 aa4.32□□□□□ -1.72
COPB1-211ENST00000534234 PRR15Q8IV56 129 aa4.32□□□□□ -1.72
COPB1-211ENST00000534234 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
COPB1-211ENST00000534234 MMP24-AS1A0A0U1RRL7 71 aa4.28□□□□□ -1.72
COPB1-211ENST00000534234 TMEM254Q8TBM7 123 aa4.28□□□□□ -1.72
COPB1-211ENST00000534234 BATFQ16520 125 aa4.27□□□□□ -1.73
COPB1-211ENST00000534234 hDV103S1A0JD37 113 aa4.27□□□□□ -1.73
COPB1-211ENST00000534234 SMIM6P0DI80 62 aa4.27□□□□□ -1.73
COPB1-211ENST00000534234 FCGBPQ9Y6R7 5405 aaPredicted RBP4.26□□□□□ -1.73
COPB1-211ENST00000534234 K7EQZ3 153 aa4.26□□□□□ -1.73
COPB1-211ENST00000534234 NDUFS5O43920 106 aa4.26□□□□□ -1.73
COPB1-211ENST00000534234 H1FX-AS1Q4G0G2 97 aa4.25□□□□□ -1.73
COPB1-211ENST00000534234 TSTD3H0UI37 97 aa4.24□□□□□ -1.73
COPB1-211ENST00000534234 H3BT86 120 aa4.23□□□□□ -1.73
COPB1-211ENST00000534234 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
COPB1-211ENST00000534234 LINC00846Q9NV44 126 aa4.23□□□□□ -1.73
COPB1-211ENST00000534234 BPY2O14599 106 aa4.23□□□□□ -1.73
COPB1-211ENST00000534234 IGKV2D-30A0A075B6S6 120 aa4.22□□□□□ -1.73
COPB1-211ENST00000534234 IGKV2-30P06310 120 aa4.22□□□□□ -1.73
COPB1-211ENST00000534234 KRTAP19-6Q3LI70 58 aa4.22□□□□□ -1.73
COPB1-211ENST00000534234 Q5W150 140 aa4.22□□□□□ -1.73
COPB1-211ENST00000534234 A0A1W2PPM0 123 aa4.21□□□□□ -1.74
COPB1-211ENST00000534234 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
COPB1-211ENST00000534234 TAX1BP3O14907 124 aa4.2□□□□□ -1.74
COPB1-211ENST00000534234 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
COPB1-211ENST00000534234 C7orf65Q6ZTY9 151 aa4.19□□□□□ -1.74
COPB1-211ENST00000534234 KRTAP23-1A1A580 65 aa4.19□□□□□ -1.74
COPB1-211ENST00000534234 CASC2Q6XLA1 102 aa4.19□□□□□ -1.74
COPB1-211ENST00000534234 Q8N9L7 120 aa4.19□□□□□ -1.74
COPB1-211ENST00000534234 HCG22E2RYF7 251 aa4.17□□□□□ -1.74
COPB1-211ENST00000534234 C4orf26Q17RF5 130 aa4.16□□□□□ -1.74
COPB1-211ENST00000534234 SPCS1Q9Y6A9 102 aa4.15□□□□□ -1.74
COPB1-211ENST00000534234 CXCL6P80162 114 aa4.14□□□□□ -1.75
COPB1-211ENST00000534234 LOC105371267A0A1B0GV96 52 aa4.13□□□□□ -1.75
COPB1-211ENST00000534234 KRTAP3-1Q9BYR8 98 aa4.12□□□□□ -1.75
COPB1-211ENST00000534234 UBL5Q9BZL1 73 aa4.12□□□□□ -1.75
COPB1-211ENST00000534234 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
COPB1-211ENST00000534234 C5orf47Q569G3 176 aa4.1□□□□□ -1.75
COPB1-211ENST00000534234 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
COPB1-211ENST00000534234 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
COPB1-211ENST00000534234 PRO0461Q9UI25 63 aa4.08□□□□□ -1.76
COPB1-211ENST00000534234 FAM236AA0A1B0GUQ0 79 aa4.07□□□□□ -1.76
COPB1-211ENST00000534234 FAM236BA0A1B0GV22 79 aa4.07□□□□□ -1.76
COPB1-211ENST00000534234 COL5A1-AS1Q5SY13 56 aa4.07□□□□□ -1.76
COPB1-211ENST00000534234 C1orf64Q8NEQ6 169 aa4.07□□□□□ -1.76
COPB1-211ENST00000534234 KRTAP6-3Q3LI67 103 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms