RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 LAMTOR3Q9UHA4 124 aa6.93□□□□□ -1.3
TRAF3IP2-212ENST00000532708 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.92□□□□□ -1.3
TRAF3IP2-212ENST00000532708 Q6ZQT0 140 aa6.91□□□□□ -1.3
TRAF3IP2-212ENST00000532708 V9GYY9 64 aa6.91□□□□□ -1.3
TRAF3IP2-212ENST00000532708 SSBP3-AS1Q7Z2R9 100 aa6.91□□□□□ -1.3
TRAF3IP2-212ENST00000532708 F8WEM9 126 aa6.9□□□□□ -1.3
TRAF3IP2-212ENST00000532708 RBM3P98179 157 aaKnown RBP6.9□□□□□ -1.3
TRAF3IP2-212ENST00000532708 C1orf195Q5TG92 126 aa6.89□□□□□ -1.31
TRAF3IP2-212ENST00000532708 TRBV7-4A0A0J9YYF1 115 aa6.89□□□□□ -1.31
TRAF3IP2-212ENST00000532708 C4orf48Q5BLP8 95 aa6.89□□□□□ -1.31
TRAF3IP2-212ENST00000532708 Q6ZVQ6 151 aa6.88□□□□□ -1.31
TRAF3IP2-212ENST00000532708 A0A0G2JQZ4 141 aa6.87□□□□□ -1.31
TRAF3IP2-212ENST00000532708 SEC61GP60059 68 aa6.87□□□□□ -1.31
TRAF3IP2-212ENST00000532708 SPAG11AQ6PDA7 123 aa6.87□□□□□ -1.31
TRAF3IP2-212ENST00000532708 SNURFQ9Y675 71 aa6.85□□□□□ -1.31
TRAF3IP2-212ENST00000532708 HMCN2Q8NDA2 5059 aa6.85□□□□□ -1.31
TRAF3IP2-212ENST00000532708 BRK1Q8WUW1 75 aa6.84□□□□□ -1.31
TRAF3IP2-212ENST00000532708 SPINK1P00995 79 aa6.84□□□□□ -1.32
TRAF3IP2-212ENST00000532708 RETNLBQ9BQ08 111 aa6.84□□□□□ -1.32
TRAF3IP2-212ENST00000532708 TMEM254Q8TBM7 123 aa6.83□□□□□ -1.32
TRAF3IP2-212ENST00000532708 NREPQ16612 68 aa6.82□□□□□ -1.32
TRAF3IP2-212ENST00000532708 PRR4Q16378 134 aa6.81□□□□□ -1.32
TRAF3IP2-212ENST00000532708 PRR15Q8IV56 129 aa6.8□□□□□ -1.32
TRAF3IP2-212ENST00000532708 IGLV8-61A0A075B6I0 122 aa6.79□□□□□ -1.32
TRAF3IP2-212ENST00000532708 A0A0U1RQV1 116 aa6.79□□□□□ -1.32
TRAF3IP2-212ENST00000532708 IGFL1Q6UW32 110 aa6.79□□□□□ -1.32
TRAF3IP2-212ENST00000532708 BPY2O14599 106 aa6.78□□□□□ -1.32
TRAF3IP2-212ENST00000532708 RPS29P62273 56 aaKnown RBP6.77□□□□□ -1.33
TRAF3IP2-212ENST00000532708 CD164Q04900 197 aa6.77□□□□□ -1.33
TRAF3IP2-212ENST00000532708 LPAP08519 4548 aa6.76□□□□□ -1.33
TRAF3IP2-212ENST00000532708 OCR1Q9BZK8 76 aa6.76□□□□□ -1.33
TRAF3IP2-212ENST00000532708 LRP2P98164 4655 aa6.75□□□□□ -1.33
TRAF3IP2-212ENST00000532708 Q1T7F1 81 aa6.74□□□□□ -1.33
TRAF3IP2-212ENST00000532708 LIMD2Q9BT23 127 aa6.74□□□□□ -1.33
TRAF3IP2-212ENST00000532708 PMAIP1Q13794 54 aa6.73□□□□□ -1.33
TRAF3IP2-212ENST00000532708 IGLV7-46A0A075B6I9 117 aa6.72□□□□□ -1.33
TRAF3IP2-212ENST00000532708 A0A1B0GW54 56 aa6.71□□□□□ -1.33
TRAF3IP2-212ENST00000532708 MPLKIPQ8TAP9 179 aa6.71□□□□□ -1.33
TRAF3IP2-212ENST00000532708 hDV103S1A0JD37 113 aa6.71□□□□□ -1.34
TRAF3IP2-212ENST00000532708 IGKV4-1P06312 121 aa6.71□□□□□ -1.34
TRAF3IP2-212ENST00000532708 A0A1W2PNM2 257 aa6.68□□□□□ -1.34
TRAF3IP2-212ENST00000532708 CYP4F30PQ9H0H9 118 aa6.66□□□□□ -1.34
TRAF3IP2-212ENST00000532708 A0A087WSZ3 146 aa6.65□□□□□ -1.34
TRAF3IP2-212ENST00000532708 TPRXLQ17RH7 258 aa6.64□□□□□ -1.35
TRAF3IP2-212ENST00000532708 UBR4Q5T4S7 5183 aa6.64□□□□□ -1.35
TRAF3IP2-212ENST00000532708 ZCCHC13Q8WW36 166 aaKnown RBP6.64□□□□□ -1.35
TRAF3IP2-212ENST00000532708 KRTAP13-3Q3SY46 172 aa6.62□□□□□ -1.35
TRAF3IP2-212ENST00000532708 ASB16-AS1Q495Z4 193 aa6.62□□□□□ -1.35
TRAF3IP2-212ENST00000532708 C1orf64Q8NEQ6 169 aa6.61□□□□□ -1.35
TRAF3IP2-212ENST00000532708 NDUFB1O75438 58 aa6.6□□□□□ -1.35
TRAF3IP2-212ENST00000532708 C9orf92A6NGG3 77 aa6.58□□□□□ -1.36
TRAF3IP2-212ENST00000532708 TRAV22A0A0B4J277 110 aa6.58□□□□□ -1.36
TRAF3IP2-212ENST00000532708 Q8N9L7 120 aa6.57□□□□□ -1.36
TRAF3IP2-212ENST00000532708 Q96NJ1 140 aa6.57□□□□□ -1.36
TRAF3IP2-212ENST00000532708 DEFB116Q30KQ4 102 aa6.55□□□□□ -1.36
TRAF3IP2-212ENST00000532708 XP32Q5T750 250 aa6.53□□□□□ -1.36
TRAF3IP2-212ENST00000532708 LINC00472Q9H8W2 130 aa6.52□□□□□ -1.37
TRAF3IP2-212ENST00000532708 SPANXA2-OT1Q8N9U9 137 aa6.51□□□□□ -1.37
TRAF3IP2-212ENST00000532708 KTN1-AS1Q86SY8 53 aa6.51□□□□□ -1.37
TRAF3IP2-212ENST00000532708 H3BPC8 53 aa6.5□□□□□ -1.37
TRAF3IP2-212ENST00000532708 PSPHP1O15172 72 aa6.5□□□□□ -1.37
TRAF3IP2-212ENST00000532708 NDUFS5O43920 106 aa6.49□□□□□ -1.37
TRAF3IP2-212ENST00000532708 Q5VV11 94 aa6.49□□□□□ -1.37
TRAF3IP2-212ENST00000532708 RNF213Q63HN8 5207 aa6.49□□□□□ -1.37
TRAF3IP2-212ENST00000532708 ATP11AUNQ6ZP68 121 aa6.48□□□□□ -1.37
TRAF3IP2-212ENST00000532708 A8MUN3 132 aa6.47□□□□□ -1.37
TRAF3IP2-212ENST00000532708 HCG22E2RYF7 251 aa6.47□□□□□ -1.37
TRAF3IP2-212ENST00000532708 MP68P56378 58 aa6.47□□□□□ -1.37
TRAF3IP2-212ENST00000532708 DSCR10P59022 87 aa6.46□□□□□ -1.37
TRAF3IP2-212ENST00000532708 Q8N9P0 234 aaPredicted RBP6.44□□□□□ -1.38
TRAF3IP2-212ENST00000532708 MUC17Q685J3 4493 aa6.43□□□□□ -1.38
TRAF3IP2-212ENST00000532708 MUC2Q02817 5179 aa6.43□□□□□ -1.38
TRAF3IP2-212ENST00000532708 IGHV6-1A0A0B4J1U7 121 aa6.43□□□□□ -1.38
TRAF3IP2-212ENST00000532708 LOC101927531A0A1B0GV80 90 aa6.43□□□□□ -1.38
TRAF3IP2-212ENST00000532708 SEC61BP60468 96 aaKnown RBP6.43□□□□□ -1.38
TRAF3IP2-212ENST00000532708 Q75L30 129 aa6.43□□□□□ -1.38
TRAF3IP2-212ENST00000532708 NOTCH2NLQ7Z3S9 236 aa6.43□□□□□ -1.38
TRAF3IP2-212ENST00000532708 LINC00208Q96KT6 92 aa6.42□□□□□ -1.38
TRAF3IP2-212ENST00000532708 K7EQZ3 153 aa6.42□□□□□ -1.38
TRAF3IP2-212ENST00000532708 LINC00313P59037 77 aa6.42□□□□□ -1.38
TRAF3IP2-212ENST00000532708 CHKB-CPT1BH3BT56 60 aa6.41□□□□□ -1.38
TRAF3IP2-212ENST00000532708 A0A1B0GVX0 72 aa6.4□□□□□ -1.38
TRAF3IP2-212ENST00000532708 RPL37P61927 97 aaKnown RBP6.4□□□□□ -1.38
TRAF3IP2-212ENST00000532708 PCOTHQ58A44 107 aa6.4□□□□□ -1.38
TRAF3IP2-212ENST00000532708 RBM12B-AS1Q9P1G2 102 aa6.4□□□□□ -1.38
TRAF3IP2-212ENST00000532708 A6NN06 94 aa6.38□□□□□ -1.39
TRAF3IP2-212ENST00000532708 A8MWP4 228 aa6.38□□□□□ -1.39
TRAF3IP2-212ENST00000532708 KRTAP4-1Q9BYQ7 146 aa6.37□□□□□ -1.39
TRAF3IP2-212ENST00000532708 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
TRAF3IP2-212ENST00000532708 KRTAP16-1A8MUX0 517 aa6.37□□□□□ -1.39
TRAF3IP2-212ENST00000532708 PRR15LQ9BU68 103 aa6.37□□□□□ -1.39
TRAF3IP2-212ENST00000532708 C20orf166-AS1Q96NR2 134 aa6.35□□□□□ -1.39
TRAF3IP2-212ENST00000532708 C8orf87E5RJ46 101 aa6.35□□□□□ -1.39
TRAF3IP2-212ENST00000532708 A8MUU9 505 aa6.34□□□□□ -1.39
TRAF3IP2-212ENST00000532708 C7orf65Q6ZTY9 151 aa6.34□□□□□ -1.39
TRAF3IP2-212ENST00000532708 LCA10Q71F78 164 aa6.34□□□□□ -1.39
TRAF3IP2-212ENST00000532708 A6NED7 52 aa6.33□□□□□ -1.4
TRAF3IP2-212ENST00000532708 H0Y9P7 68 aa6.33□□□□□ -1.4
TRAF3IP2-212ENST00000532708 A8MU10 97 aa6.32□□□□□ -1.4
TRAF3IP2-212ENST00000532708 C8orf17Q9NRJ1 99 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms