RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 SPTBN5Q9NRC6 3674 aaKnown RBP6.55□□□□□ -1.36
CSRP1-215ENST00000532313 PRO0628Q9UI54 55 aa6.54□□□□□ -1.36
CSRP1-215ENST00000532313 DCHS2Q6V1P9 2916 aa6.54□□□□□ -1.36
CSRP1-215ENST00000532313 A0A1B0GU33 70 aa6.53□□□□□ -1.36
CSRP1-215ENST00000532313 A0A0D9SG42 100 aa6.52□□□□□ -1.37
CSRP1-215ENST00000532313 KRTAP1-4P0C5Y4 121 aa6.51□□□□□ -1.37
CSRP1-215ENST00000532313 DMAC1Q96GE9 116 aa6.51□□□□□ -1.37
CSRP1-215ENST00000532313 LCA10Q71F78 164 aa6.5□□□□□ -1.37
CSRP1-215ENST00000532313 VCANP13611 3396 aa6.5□□□□□ -1.37
CSRP1-215ENST00000532313 H7BZZ5 65 aa6.49□□□□□ -1.37
CSRP1-215ENST00000532313 CDC42SE1Q9NRR8 79 aa6.49□□□□□ -1.37
CSRP1-215ENST00000532313 C20orf166-AS1Q96NR2 134 aa6.49□□□□□ -1.37
CSRP1-215ENST00000532313 TENM2Q9NT68 2774 aa6.48□□□□□ -1.37
CSRP1-215ENST00000532313 FBN2P35556 2912 aa6.47□□□□□ -1.37
CSRP1-215ENST00000532313 OTOGQ6ZRI0 2925 aa6.47□□□□□ -1.37
CSRP1-215ENST00000532313 A8MUU9 505 aa6.46□□□□□ -1.38
CSRP1-215ENST00000532313 TENM3Q9P273 2699 aa6.44□□□□□ -1.38
CSRP1-215ENST00000532313 M0QZ58 72 aa6.44□□□□□ -1.38
CSRP1-215ENST00000532313 CELSR3Q9NYQ7 3312 aa6.43□□□□□ -1.38
CSRP1-215ENST00000532313 TENM1Q9UKZ4 2725 aa6.42□□□□□ -1.38
CSRP1-215ENST00000532313 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
CSRP1-215ENST00000532313 XP32Q5T750 250 aa6.42□□□□□ -1.38
CSRP1-215ENST00000532313 NOTCH2NLQ7Z3S9 236 aa6.39□□□□□ -1.39
CSRP1-215ENST00000532313 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
CSRP1-215ENST00000532313 DNAH14Q0VDD8 3507 aa6.36□□□□□ -1.39
CSRP1-215ENST00000532313 CFAP47Q6ZTR5 3102 aa6.35□□□□□ -1.39
CSRP1-215ENST00000532313 KRTAP13-3Q3SY46 172 aa6.32□□□□□ -1.4
CSRP1-215ENST00000532313 LINC01558Q9Y6Z2 57 aa6.31□□□□□ -1.4
CSRP1-215ENST00000532313 Q1T7F1 81 aa6.26□□□□□ -1.41
CSRP1-215ENST00000532313 LOC400499M0QZD8 3231 aa6.24□□□□□ -1.41
CSRP1-215ENST00000532313 FBN3Q75N90 2809 aa6.23□□□□□ -1.41
CSRP1-215ENST00000532313 CELSR1Q9NYQ6 3014 aa6.21□□□□□ -1.41
CSRP1-215ENST00000532313 PKD1L1Q8TDX9 2849 aa6.17□□□□□ -1.42
CSRP1-215ENST00000532313 SPEGQ15772 3267 aa6.14□□□□□ -1.43
CSRP1-215ENST00000532313 KRTAP10-10P60014 251 aa6.14□□□□□ -1.43
CSRP1-215ENST00000532313 VWFP04275 2813 aa6.13□□□□□ -1.43
CSRP1-215ENST00000532313 FBN1P35555 2871 aaKnown RBP6.13□□□□□ -1.43
CSRP1-215ENST00000532313 DCHS1Q96JQ0 3298 aa6.12□□□□□ -1.43
CSRP1-215ENST00000532313 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
CSRP1-215ENST00000532313 LUZP6Q538Z0 58 aa6.08□□□□□ -1.44
CSRP1-215ENST00000532313 TGP01266 2768 aa6.07□□□□□ -1.44
CSRP1-215ENST00000532313 ANK3Q12955 4377 aaKnown RBP6.07□□□□□ -1.44
CSRP1-215ENST00000532313 NBPF19A0A087WUL8 3843 aa6.06□□□□□ -1.44
CSRP1-215ENST00000532313 MYO15AQ9UKN7 3530 aa6.06□□□□□ -1.44
CSRP1-215ENST00000532313 KTN1-AS1Q86SY8 53 aa6.06□□□□□ -1.44
CSRP1-215ENST00000532313 CYSTM1Q9H1C7 97 aa6.03□□□□□ -1.44
CSRP1-215ENST00000532313 KRTAP16-1A8MUX0 517 aa6.02□□□□□ -1.44
CSRP1-215ENST00000532313 ROMO1P60602 79 aa6.01□□□□□ -1.45
CSRP1-215ENST00000532313 RELNP78509 3460 aa5.98□□□□□ -1.45
CSRP1-215ENST00000532313 TNP1P09430 55 aa5.98□□□□□ -1.45
CSRP1-215ENST00000532313 SPATA8Q6RVD6 105 aa5.96□□□□□ -1.45
CSRP1-215ENST00000532313 ZFHX3Q15911 3703 aa5.96□□□□□ -1.46
CSRP1-215ENST00000532313 MT1HL1P0DM35 61 aa5.95□□□□□ -1.46
CSRP1-215ENST00000532313 Q5VV11 94 aa5.93□□□□□ -1.46
CSRP1-215ENST00000532313 H3BS24 57 aa5.92□□□□□ -1.46
CSRP1-215ENST00000532313 MUC3AQ02505 3323 aa5.87□□□□□ -1.47
CSRP1-215ENST00000532313 ALMS1Q8TCU4 4167 aa5.82□□□□□ -1.48
CSRP1-215ENST00000532313 KRTAP10-4P60372 401 aaPredicted RBP5.82□□□□□ -1.48
CSRP1-215ENST00000532313 KRTAP4-5Q9BYR2 181 aa5.81□□□□□ -1.48
CSRP1-215ENST00000532313 LAMA5O15230 3695 aa5.8□□□□□ -1.48
CSRP1-215ENST00000532313 PP632Q6XCG6 107 aa5.75□□□□□ -1.49
CSRP1-215ENST00000532313 H0YAA0 97 aa5.75□□□□□ -1.49
CSRP1-215ENST00000532313 WDFY3Q8IZQ1 3526 aa5.75□□□□□ -1.49
CSRP1-215ENST00000532313 A8MU10 97 aa5.72□□□□□ -1.49
CSRP1-215ENST00000532313 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
CSRP1-215ENST00000532313 SMG1Q96Q15 3661 aaKnown RBP5.68□□□□□ -1.5
CSRP1-215ENST00000532313 DMDP11532 3685 aa5.67□□□□□ -1.5
CSRP1-215ENST00000532313 MEGF8Q7Z7M0 2845 aa5.66□□□□□ -1.5
CSRP1-215ENST00000532313 ASPMQ8IZT6 3477 aa5.65□□□□□ -1.51
CSRP1-215ENST00000532313 SRRM2Q9UQ35 2752 aaKnown RBP5.62□□□□□ -1.51
CSRP1-215ENST00000532313 HUWE1Q7Z6Z7 4374 aaKnown RBP5.61□□□□□ -1.51
CSRP1-215ENST00000532313 COL7A1Q02388 2944 aa5.59□□□□□ -1.51
CSRP1-215ENST00000532313 A6NN06 94 aa5.59□□□□□ -1.52
CSRP1-215ENST00000532313 P0C880 135 aa5.58□□□□□ -1.52
CSRP1-215ENST00000532313 CSMD1Q96PZ7 3565 aa5.58□□□□□ -1.52
CSRP1-215ENST00000532313 TRRAPQ9Y4A5 3859 aa5.58□□□□□ -1.52
CSRP1-215ENST00000532313 ZFHX4Q86UP3 3567 aa5.57□□□□□ -1.52
CSRP1-215ENST00000532313 PRAC1Q96KF2 57 aa5.53□□□□□ -1.52
CSRP1-215ENST00000532313 CSMD2Q7Z408 3487 aa5.53□□□□□ -1.52
CSRP1-215ENST00000532313 BSNQ9UPA5 3926 aa5.53□□□□□ -1.52
CSRP1-215ENST00000532313 DNAH9Q9NYC9 4486 aa5.49□□□□□ -1.53
CSRP1-215ENST00000532313 A0A0A0MQY5 61 aa5.48□□□□□ -1.53
CSRP1-215ENST00000532313 DNAH1Q9P2D7 4330 aa5.48□□□□□ -1.53
CSRP1-215ENST00000532313 DNAH11Q96DT5 4516 aa5.45□□□□□ -1.54
CSRP1-215ENST00000532313 DNHD1Q96M86 4753 aa5.44□□□□□ -1.54
CSRP1-215ENST00000532313 AKAP9Q99996 3911 aa5.44□□□□□ -1.54
CSRP1-215ENST00000532313 SPENQ96T58 3664 aaKnown RBP5.43□□□□□ -1.54
CSRP1-215ENST00000532313 DNAH10Q8IVF4 4471 aa5.39□□□□□ -1.55
CSRP1-215ENST00000532313 KRTAP3-1Q9BYR8 98 aa5.39□□□□□ -1.55
CSRP1-215ENST00000532313 CUBNO60494 3623 aa5.34□□□□□ -1.56
CSRP1-215ENST00000532313 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
CSRP1-215ENST00000532313 KRTAP13-4Q3LI77 160 aa5.32□□□□□ -1.56
CSRP1-215ENST00000532313 DNAH5Q8TE73 4624 aa5.31□□□□□ -1.56
CSRP1-215ENST00000532313 SVEP1Q4LDE5 3571 aa5.29□□□□□ -1.56
CSRP1-215ENST00000532313 PLECQ15149 4684 aaKnown RBP5.27□□□□□ -1.57
CSRP1-215ENST00000532313 KRTAP12-1P59990 96 aa5.22□□□□□ -1.57
CSRP1-215ENST00000532313 ANK2Q01484 3957 aa5.2□□□□□ -1.58
CSRP1-215ENST00000532313 KRTAP12-2P59991 146 aa5.2□□□□□ -1.58
CSRP1-215ENST00000532313 VPS13DQ5THJ4 4388 aa5.19□□□□□ -1.58
CSRP1-215ENST00000532313 DYNC1H1Q14204 4646 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms