RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 COL5A1-AS1Q5SY13 56 aa6.72□□□□□ -1.33
SF3B2-212ENST00000531589 VPS25Q9BRG1 176 aa6.71□□□□□ -1.34
SF3B2-212ENST00000531589 LINC00472Q9H8W2 130 aa6.7□□□□□ -1.34
SF3B2-212ENST00000531589 SPCS1Q9Y6A9 102 aa6.69□□□□□ -1.34
SF3B2-212ENST00000531589 KRTAP16-1A8MUX0 517 aa6.68□□□□□ -1.34
SF3B2-212ENST00000531589 RBM3P98179 157 aaKnown RBP6.68□□□□□ -1.34
SF3B2-212ENST00000531589 C21orf62-AS1Q17RA5 79 aa6.68□□□□□ -1.34
SF3B2-212ENST00000531589 DEFB116Q30KQ4 102 aa6.68□□□□□ -1.34
SF3B2-212ENST00000531589 DSCR8Q96T75 97 aa6.68□□□□□ -1.34
SF3B2-212ENST00000531589 IGHV6-1A0A0B4J1U7 121 aa6.67□□□□□ -1.34
SF3B2-212ENST00000531589 FAM236DA0A1B0GTK5 79 aa6.67□□□□□ -1.34
SF3B2-212ENST00000531589 FAM236CP0DP71 79 aa6.67□□□□□ -1.34
SF3B2-212ENST00000531589 C8orf87E5RJ46 101 aa6.65□□□□□ -1.34
SF3B2-212ENST00000531589 C14orf132Q9NPU4 83 aa6.65□□□□□ -1.34
SF3B2-212ENST00000531589 RBM12B-AS1Q9P1G2 102 aa6.65□□□□□ -1.34
SF3B2-212ENST00000531589 NOTCH2NLQ7Z3S9 236 aa6.64□□□□□ -1.35
SF3B2-212ENST00000531589 J3KT08 172 aa6.63□□□□□ -1.35
SF3B2-212ENST00000531589 SMCPP49901 116 aaPredicted RBP6.63□□□□□ -1.35
SF3B2-212ENST00000531589 A0A1B0GVX0 72 aa6.62□□□□□ -1.35
SF3B2-212ENST00000531589 H3BT86 120 aa6.61□□□□□ -1.35
SF3B2-212ENST00000531589 K7EP34 96 aa6.61□□□□□ -1.35
SF3B2-212ENST00000531589 Q6ZQT0 140 aa6.61□□□□□ -1.35
SF3B2-212ENST00000531589 JMJD7-PLA2G4BH0Y9G9 81 aa6.6□□□□□ -1.35
SF3B2-212ENST00000531589 KRTAP9-8Q9BYQ0 159 aa6.6□□□□□ -1.35
SF3B2-212ENST00000531589 NDUFB1O75438 58 aa6.59□□□□□ -1.35
SF3B2-212ENST00000531589 LOC110117498A0A087WWA1 95 aa6.58□□□□□ -1.36
SF3B2-212ENST00000531589 HRES1P13985 223 aa6.58□□□□□ -1.36
SF3B2-212ENST00000531589 MPLKIPQ8TAP9 179 aa6.58□□□□□ -1.36
SF3B2-212ENST00000531589 PRO0461Q9UI25 63 aa6.58□□□□□ -1.36
SF3B2-212ENST00000531589 A0A1B0GW54 56 aa6.57□□□□□ -1.36
SF3B2-212ENST00000531589 ZCCHC13Q8WW36 166 aaKnown RBP6.55□□□□□ -1.36
SF3B2-212ENST00000531589 PDE6GP18545 87 aa6.54□□□□□ -1.36
SF3B2-212ENST00000531589 GTF2H5Q6ZYL4 71 aa6.53□□□□□ -1.36
SF3B2-212ENST00000531589 SPINK7P58062 85 aa6.51□□□□□ -1.37
SF3B2-212ENST00000531589 Q8N9P0 234 aaPredicted RBP6.51□□□□□ -1.37
SF3B2-212ENST00000531589 A8MWP4 228 aa6.5□□□□□ -1.37
SF3B2-212ENST00000531589 MT2AP02795 61 aa6.5□□□□□ -1.37
SF3B2-212ENST00000531589 C8orf17Q9NRJ1 99 aa6.48□□□□□ -1.37
SF3B2-212ENST00000531589 A0A1B0GV90 55 aa6.47□□□□□ -1.37
SF3B2-212ENST00000531589 KRTAP10-10P60014 251 aa6.46□□□□□ -1.38
SF3B2-212ENST00000531589 NREPQ16612 68 aa6.46□□□□□ -1.38
SF3B2-212ENST00000531589 ETDBQ3ZM63 59 aa6.46□□□□□ -1.38
SF3B2-212ENST00000531589 USH2AO75445 5202 aa6.44□□□□□ -1.38
SF3B2-212ENST00000531589 IGKV3D-7A0A0C4DH55 119 aa6.44□□□□□ -1.38
SF3B2-212ENST00000531589 F8W1H4 67 aa6.44□□□□□ -1.38
SF3B2-212ENST00000531589 MT1FP04733 61 aa6.44□□□□□ -1.38
SF3B2-212ENST00000531589 Q6ZVQ6 151 aa6.44□□□□□ -1.38
SF3B2-212ENST00000531589 PRR15Q8IV56 129 aa6.43□□□□□ -1.38
SF3B2-212ENST00000531589 WFDC13Q8IUB5 93 aa6.42□□□□□ -1.38
SF3B2-212ENST00000531589 KRTAP9-3Q9BYQ3 159 aa6.4□□□□□ -1.38
SF3B2-212ENST00000531589 LINC00846Q9NV44 126 aa6.4□□□□□ -1.38
SF3B2-212ENST00000531589 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.39□□□□□ -1.39
SF3B2-212ENST00000531589 TMEM254Q8TBM7 123 aa6.39□□□□□ -1.39
SF3B2-212ENST00000531589 MRPL34Q9BQ48 92 aaKnown RBP6.39□□□□□ -1.39
SF3B2-212ENST00000531589 SSPOA2VEC9 5147 aa6.39□□□□□ -1.39
SF3B2-212ENST00000531589 K7EQZ3 153 aa6.38□□□□□ -1.39
SF3B2-212ENST00000531589 Q8N9L7 120 aa6.38□□□□□ -1.39
SF3B2-212ENST00000531589 BPY2O14599 106 aa6.37□□□□□ -1.39
SF3B2-212ENST00000531589 LCE2BO14633 110 aa6.37□□□□□ -1.39
SF3B2-212ENST00000531589 MMP24-AS1A0A0U1RRL7 71 aa6.35□□□□□ -1.39
SF3B2-212ENST00000531589 hDV103S1A0JD37 113 aa6.35□□□□□ -1.39
SF3B2-212ENST00000531589 KRTAP9-7A8MTY7 169 aa6.35□□□□□ -1.39
SF3B2-212ENST00000531589 NDUFS5O43920 106 aa6.35□□□□□ -1.39
SF3B2-212ENST00000531589 KRTAP19-1Q8IUB9 90 aa6.32□□□□□ -1.4
SF3B2-212ENST00000531589 UBL5Q9BZL1 73 aa6.32□□□□□ -1.4
SF3B2-212ENST00000531589 H1FX-AS1Q4G0G2 97 aa6.3□□□□□ -1.4
SF3B2-212ENST00000531589 IGKV2D-30A0A075B6S6 120 aa6.26□□□□□ -1.41
SF3B2-212ENST00000531589 IGKV2-30P06310 120 aa6.26□□□□□ -1.41
SF3B2-212ENST00000531589 C7orf65Q6ZTY9 151 aa6.26□□□□□ -1.41
SF3B2-212ENST00000531589 FCGBPQ9Y6R7 5405 aaPredicted RBP6.26□□□□□ -1.41
SF3B2-212ENST00000531589 CASC2Q6XLA1 102 aa6.24□□□□□ -1.41
SF3B2-212ENST00000531589 HCG22E2RYF7 251 aa6.21□□□□□ -1.42
SF3B2-212ENST00000531589 Q5W150 140 aa6.21□□□□□ -1.42
SF3B2-212ENST00000531589 CXCL6P80162 114 aa6.2□□□□□ -1.42
SF3B2-212ENST00000531589 KRTAP19-6Q3LI70 58 aa6.2□□□□□ -1.42
SF3B2-212ENST00000531589 ACYP1P07311 99 aa6.19□□□□□ -1.42
SF3B2-212ENST00000531589 FAM240AA0A1B0GVK7 77 aa6.18□□□□□ -1.42
SF3B2-212ENST00000531589 C4orf26Q17RF5 130 aa6.15□□□□□ -1.42
SF3B2-212ENST00000531589 HIST1H4AP62805 103 aaKnown RBP6.13□□□□□ -1.43
SF3B2-212ENST00000531589 A0A087WVE0 104 aa6.11□□□□□ -1.43
SF3B2-212ENST00000531589 LINC00643Q86TS7 51 aa6.1□□□□□ -1.43
SF3B2-212ENST00000531589 ATP5EP2Q5VTU8 51 aa6.09□□□□□ -1.43
SF3B2-212ENST00000531589 TP53AIP1Q9HCN2 124 aa6.08□□□□□ -1.44
SF3B2-212ENST00000531589 MACF1Q9UPN3 7388 aaKnown RBP6.07□□□□□ -1.44
SF3B2-212ENST00000531589 J3QR89 54 aa6.07□□□□□ -1.44
SF3B2-212ENST00000531589 FAM236AA0A1B0GUQ0 79 aa6.06□□□□□ -1.44
SF3B2-212ENST00000531589 FAM236BA0A1B0GV22 79 aa6.06□□□□□ -1.44
SF3B2-212ENST00000531589 C5orf47Q569G3 176 aa6.06□□□□□ -1.44
SF3B2-212ENST00000531589 S4R3F8 94 aa6.05□□□□□ -1.44
SF3B2-212ENST00000531589 CSAG1Q6PB30 78 aa6.04□□□□□ -1.44
SF3B2-212ENST00000531589 C1orf64Q8NEQ6 169 aa6.04□□□□□ -1.44
SF3B2-212ENST00000531589 SYNE2Q8WXH0 6885 aaKnown RBP6.02□□□□□ -1.45
SF3B2-212ENST00000531589 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
SF3B2-212ENST00000531589 LCA10Q71F78 164 aa5.98□□□□□ -1.45
SF3B2-212ENST00000531589 K7ERU9 68 aa5.97□□□□□ -1.45
SF3B2-212ENST00000531589 MT-ATP8P03928 68 aa5.97□□□□□ -1.45
SF3B2-212ENST00000531589 KRTAP6-3Q3LI67 103 aa5.97□□□□□ -1.45
SF3B2-212ENST00000531589 TRAV22A0A0B4J277 110 aa5.94□□□□□ -1.46
SF3B2-212ENST00000531589 Q5VV11 94 aa5.94□□□□□ -1.46
SF3B2-212ENST00000531589 H0Y9P7 68 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms