RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 TMEM238LA0A1B0GVL6 79 aa9.01□□□□□ -0.97
SSSCA1-206ENST00000531405 A6NJY4 79 aa9.01□□□□□ -0.97
SSSCA1-206ENST00000531405 ORMDL1Q9P0S3 153 aa8.99□□□□□ -0.97
SSSCA1-206ENST00000531405 DNAL4O96015 105 aa8.98□□□□□ -0.97
SSSCA1-206ENST00000531405 CCKP06307 115 aa8.98□□□□□ -0.97
SSSCA1-206ENST00000531405 TRACP01848 142 aa8.97□□□□□ -0.97
SSSCA1-206ENST00000531405 A0A1B0GVX0 72 aa8.94□□□□□ -0.98
SSSCA1-206ENST00000531405 BATFQ16520 125 aa8.94□□□□□ -0.98
SSSCA1-206ENST00000531405 COL5A1-AS1Q5SY13 56 aa8.94□□□□□ -0.98
SSSCA1-206ENST00000531405 MTURNQ8N3F0 131 aa8.94□□□□□ -0.98
SSSCA1-206ENST00000531405 C8orf87E5RJ46 101 aa8.92□□□□□ -0.98
SSSCA1-206ENST00000531405 TMEM256-PLSCR3K7ERE1 68 aa8.92□□□□□ -0.98
SSSCA1-206ENST00000531405 ZCCHC13Q8WW36 166 aaKnown RBP8.92□□□□□ -0.98
SSSCA1-206ENST00000531405 H3BQ85 93 aa8.91□□□□□ -0.98
SSSCA1-206ENST00000531405 PSMB2P49721 201 aa8.91□□□□□ -0.98
SSSCA1-206ENST00000531405 SPINK7P58062 85 aa8.91□□□□□ -0.98
SSSCA1-206ENST00000531405 KRTAP19-6Q3LI70 58 aa8.91□□□□□ -0.98
SSSCA1-206ENST00000531405 VPS25Q9BRG1 176 aa8.91□□□□□ -0.98
SSSCA1-206ENST00000531405 K7ERJ3 54 aa8.9□□□□□ -0.98
SSSCA1-206ENST00000531405 TAX1BP3O14907 124 aa8.88□□□□□ -0.99
SSSCA1-206ENST00000531405 LINC00846Q9NV44 126 aa8.88□□□□□ -0.99
SSSCA1-206ENST00000531405 UBE2V1Q13404 147 aa8.86□□□□□ -0.99
SSSCA1-206ENST00000531405 C9orf118A6NHY6 69 aa8.85□□□□□ -0.99
SSSCA1-206ENST00000531405 COX6CP09669 75 aa8.83□□□□□ -1
SSSCA1-206ENST00000531405 A8MWP4 228 aa8.82□□□□□ -1
SSSCA1-206ENST00000531405 WFDC13Q8IUB5 93 aa8.82□□□□□ -1
SSSCA1-206ENST00000531405 RBM3P98179 157 aaKnown RBP8.8□□□□□ -1
SSSCA1-206ENST00000531405 Q8N9P0 234 aaPredicted RBP8.8□□□□□ -1
SSSCA1-206ENST00000531405 DSCR8Q96T75 97 aa8.79□□□□□ -1
SSSCA1-206ENST00000531405 A0A1W2PPM0 123 aa8.78□□□□□ -1
SSSCA1-206ENST00000531405 J3KT08 172 aa8.78□□□□□ -1
SSSCA1-206ENST00000531405 LYRM7Q5U5X0 104 aa8.75□□□□□ -1.01
SSSCA1-206ENST00000531405 Q6ZQT0 140 aa8.74□□□□□ -1.01
SSSCA1-206ENST00000531405 NAA38Q9BRA0 125 aaKnown RBP8.74□□□□□ -1.01
SSSCA1-206ENST00000531405 NDUFB1O75438 58 aa8.73□□□□□ -1.01
SSSCA1-206ENST00000531405 C8orf17Q9NRJ1 99 aa8.73□□□□□ -1.01
SSSCA1-206ENST00000531405 C9JAW5 83 aa8.72□□□□□ -1.01
SSSCA1-206ENST00000531405 SCGB1C2P0DMR2 95 aa8.71□□□□□ -1.02
SSSCA1-206ENST00000531405 A0A1B0GV90 55 aa8.69□□□□□ -1.02
SSSCA1-206ENST00000531405 BAALC-AS2P0C853 105 aa8.69□□□□□ -1.02
SSSCA1-206ENST00000531405 C21orf62-AS1Q17RA5 79 aa8.69□□□□□ -1.02
SSSCA1-206ENST00000531405 KRTAP6-3Q3LI67 103 aa8.69□□□□□ -1.02
SSSCA1-206ENST00000531405 SPCS1Q9Y6A9 102 aa8.68□□□□□ -1.02
SSSCA1-206ENST00000531405 IGKV3D-7A0A0C4DH55 119 aa8.67□□□□□ -1.02
SSSCA1-206ENST00000531405 K7EP34 96 aa8.67□□□□□ -1.02
SSSCA1-206ENST00000531405 GTF2H5Q6ZYL4 71 aa8.66□□□□□ -1.02
SSSCA1-206ENST00000531405 Q6ZVQ6 151 aa8.65□□□□□ -1.02
SSSCA1-206ENST00000531405 ATXN8Q156A1 80 aa8.64□□□□□ -1.03
SSSCA1-206ENST00000531405 H1FX-AS1Q4G0G2 97 aa8.62□□□□□ -1.03
SSSCA1-206ENST00000531405 PRR15Q8IV56 129 aa8.58□□□□□ -1.04
SSSCA1-206ENST00000531405 LOC110117498A0A087WWA1 95 aa8.57□□□□□ -1.04
SSSCA1-206ENST00000531405 PRO0461Q9UI25 63 aa8.57□□□□□ -1.04
SSSCA1-206ENST00000531405 MMP24-AS1A0A0U1RRL7 71 aa8.56□□□□□ -1.04
SSSCA1-206ENST00000531405 F8W1H4 67 aa8.55□□□□□ -1.04
SSSCA1-206ENST00000531405 JMJD7-PLA2G4BH0Y9G9 81 aa8.55□□□□□ -1.04
SSSCA1-206ENST00000531405 MRPL34Q9BQ48 92 aaKnown RBP8.55□□□□□ -1.04
SSSCA1-206ENST00000531405 A0A1B0GW54 56 aa8.54□□□□□ -1.04
SSSCA1-206ENST00000531405 TMEM254Q8TBM7 123 aa8.54□□□□□ -1.04
SSSCA1-206ENST00000531405 H3BT86 120 aa8.53□□□□□ -1.04
SSSCA1-206ENST00000531405 C14orf132Q9NPU4 83 aa8.53□□□□□ -1.04
SSSCA1-206ENST00000531405 NEBP20929 6669 aa8.53□□□□□ -1.04
SSSCA1-206ENST00000531405 NDUFS5O43920 106 aa8.51□□□□□ -1.05
SSSCA1-206ENST00000531405 SMCPP49901 116 aaPredicted RBP8.51□□□□□ -1.05
SSSCA1-206ENST00000531405 NREPQ16612 68 aa8.5□□□□□ -1.05
SSSCA1-206ENST00000531405 IGKV2D-30A0A075B6S6 120 aa8.49□□□□□ -1.05
SSSCA1-206ENST00000531405 IGKV2-30P06310 120 aa8.49□□□□□ -1.05
SSSCA1-206ENST00000531405 PDE6GP18545 87 aa8.49□□□□□ -1.05
SSSCA1-206ENST00000531405 hDV103S1A0JD37 113 aa8.48□□□□□ -1.05
SSSCA1-206ENST00000531405 K7EQZ3 153 aa8.47□□□□□ -1.05
SSSCA1-206ENST00000531405 Q5W150 140 aa8.44□□□□□ -1.06
SSSCA1-206ENST00000531405 MUC12Q9UKN1 5478 aa8.44□□□□□ -1.06
SSSCA1-206ENST00000531405 C7orf65Q6ZTY9 151 aa8.43□□□□□ -1.06
SSSCA1-206ENST00000531405 C4orf26Q17RF5 130 aa8.39□□□□□ -1.07
SSSCA1-206ENST00000531405 A6NN06 94 aa8.38□□□□□ -1.07
SSSCA1-206ENST00000531405 ETDBQ3ZM63 59 aa8.38□□□□□ -1.07
SSSCA1-206ENST00000531405 MT1BP07438 61 aa8.36□□□□□ -1.07
SSSCA1-206ENST00000531405 C5orf47Q569G3 176 aa8.36□□□□□ -1.07
SSSCA1-206ENST00000531405 FAM236AA0A1B0GUQ0 79 aa8.35□□□□□ -1.07
SSSCA1-206ENST00000531405 FAM236BA0A1B0GV22 79 aa8.35□□□□□ -1.07
SSSCA1-206ENST00000531405 BPY2O14599 106 aa8.32□□□□□ -1.08
SSSCA1-206ENST00000531405 Q5VV11 94 aa8.31□□□□□ -1.08
SSSCA1-206ENST00000531405 Q8N9L7 120 aa8.31□□□□□ -1.08
SSSCA1-206ENST00000531405 HCG22E2RYF7 251 aa8.3□□□□□ -1.08
SSSCA1-206ENST00000531405 CASC2Q6XLA1 102 aa8.29□□□□□ -1.08
SSSCA1-206ENST00000531405 KRTAP19-8Q3LI54 63 aa8.26□□□□□ -1.09
SSSCA1-206ENST00000531405 KRTAP3-1Q9BYR8 98 aa8.26□□□□□ -1.09
SSSCA1-206ENST00000531405 SPRR2GQ9BYE4 73 aa8.25□□□□□ -1.09
SSSCA1-206ENST00000531405 S4R3F8 94 aa8.25□□□□□ -1.09
SSSCA1-206ENST00000531405 FAM240AA0A1B0GVK7 77 aa8.23□□□□□ -1.09
SSSCA1-206ENST00000531405 J3QR89 54 aa8.23□□□□□ -1.09
SSSCA1-206ENST00000531405 KRTAP20-1Q3LI63 56 aa8.23□□□□□ -1.09
SSSCA1-206ENST00000531405 KRTAP10-5P60370 271 aa8.22□□□□□ -1.09
SSSCA1-206ENST00000531405 K7ERU9 68 aa8.21□□□□□ -1.1
SSSCA1-206ENST00000531405 CXCL6P80162 114 aa8.21□□□□□ -1.1
SSSCA1-206ENST00000531405 ACYP1P07311 99 aa8.2□□□□□ -1.1
SSSCA1-206ENST00000531405 CSAG1Q6PB30 78 aa8.2□□□□□ -1.1
SSSCA1-206ENST00000531405 LCA10Q71F78 164 aa8.2□□□□□ -1.1
SSSCA1-206ENST00000531405 MDN1Q9NU22 5596 aa8.18□□□□□ -1.1
SSSCA1-206ENST00000531405 KMT2DO14686 5537 aa8.16□□□□□ -1.1
SSSCA1-206ENST00000531405 C1orf64Q8NEQ6 169 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms