RNA–Protein interactions for RNA: ENST00000529993.5

LRP5-206, Transcript of LDL receptor related protein 5, humanhuman

TSL 1 (best)

Gene LRP5, Length 5,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-206ENST00000529993 LINC01554Q52M75 96 aa8.84□□□□□ -0.99
LRP5-206ENST00000529993 Q6ZR54 194 aa8.84□□□□□ -0.99
LRP5-206ENST00000529993 LCA10Q71F78 164 aa8.84□□□□□ -0.99
LRP5-206ENST00000529993 A0A087X002 238 aa8.83□□□□□ -1
LRP5-206ENST00000529993 NOTCH2NLQ7Z3S9 236 aa8.83□□□□□ -1
LRP5-206ENST00000529993 SPINK7P58062 85 aa8.83□□□□□ -1
LRP5-206ENST00000529993 RBM12B-AS1Q9P1G2 102 aa8.81□□□□□ -1
LRP5-206ENST00000529993 CSMD1Q96PZ7 3565 aa8.81□□□□□ -1
LRP5-206ENST00000529993 Q6ZRN7 208 aaPredicted RBP8.8□□□□□ -1
LRP5-206ENST00000529993 CELSR1Q9NYQ6 3014 aa8.8□□□□□ -1
LRP5-206ENST00000529993 A0A1B0GU33 70 aa8.8□□□□□ -1
LRP5-206ENST00000529993 SMG1Q96Q15 3661 aaKnown RBP8.8□□□□□ -1
LRP5-206ENST00000529993 CRIPTQ9P021 101 aa8.79□□□□□ -1
LRP5-206ENST00000529993 Q6ZSA8 131 aa8.74□□□□□ -1.01
LRP5-206ENST00000529993 PRAC1Q96KF2 57 aa8.73□□□□□ -1.01
LRP5-206ENST00000529993 TENM3Q9P273 2699 aa8.72□□□□□ -1.01
LRP5-206ENST00000529993 DMAC1Q96GE9 116 aa8.68□□□□□ -1.02
LRP5-206ENST00000529993 LCE6AA0A183 80 aa8.66□□□□□ -1.02
LRP5-206ENST00000529993 KRTAP13-1Q8IUC0 172 aa8.66□□□□□ -1.02
LRP5-206ENST00000529993 SVEP1Q4LDE5 3571 aa8.65□□□□□ -1.03
LRP5-206ENST00000529993 TENM1Q9UKZ4 2725 aa8.64□□□□□ -1.03
LRP5-206ENST00000529993 Q5VSD8 79 aa8.63□□□□□ -1.03
LRP5-206ENST00000529993 CUBNO60494 3623 aa8.59□□□□□ -1.03
LRP5-206ENST00000529993 KRTAP13-2Q52LG2 175 aa8.58□□□□□ -1.04
LRP5-206ENST00000529993 S4R3F8 94 aa8.58□□□□□ -1.04
LRP5-206ENST00000529993 FBN1P35555 2871 aaKnown RBP8.55□□□□□ -1.04
LRP5-206ENST00000529993 CSAG1Q6PB30 78 aa8.54□□□□□ -1.04
LRP5-206ENST00000529993 PDZD2O15018 2839 aa8.54□□□□□ -1.04
LRP5-206ENST00000529993 VWFP04275 2813 aa8.54□□□□□ -1.04
LRP5-206ENST00000529993 PKD1L1Q8TDX9 2849 aa8.53□□□□□ -1.04
LRP5-206ENST00000529993 ASB16-AS1Q495Z4 193 aa8.51□□□□□ -1.05
LRP5-206ENST00000529993 A8MU10 97 aa8.48□□□□□ -1.05
LRP5-206ENST00000529993 SPATA8Q6RVD6 105 aa8.46□□□□□ -1.06
LRP5-206ENST00000529993 CAMK2N1Q7Z7J9 78 aa8.45□□□□□ -1.06
LRP5-206ENST00000529993 NBPF19A0A087WUL8 3843 aa8.44□□□□□ -1.06
LRP5-206ENST00000529993 OTOGQ6ZRI0 2925 aa8.43□□□□□ -1.06
LRP5-206ENST00000529993 H1FX-AS1Q4G0G2 97 aa8.43□□□□□ -1.06
LRP5-206ENST00000529993 TENM2Q9NT68 2774 aa8.41□□□□□ -1.06
LRP5-206ENST00000529993 RPL37P61927 97 aaKnown RBP8.39□□□□□ -1.07
LRP5-206ENST00000529993 R4GN34 69 aa8.39□□□□□ -1.07
LRP5-206ENST00000529993 SPENQ96T58 3664 aaKnown RBP8.38□□□□□ -1.07
LRP5-206ENST00000529993 TGP01266 2768 aa8.38□□□□□ -1.07
LRP5-206ENST00000529993 CSMD2Q7Z408 3487 aa8.38□□□□□ -1.07
LRP5-206ENST00000529993 ZFHX3Q15911 3703 aa8.36□□□□□ -1.07
LRP5-206ENST00000529993 M0R2T5 61 aa8.36□□□□□ -1.07
LRP5-206ENST00000529993 LUZP6Q538Z0 58 aa8.34□□□□□ -1.07
LRP5-206ENST00000529993 SEC61BP60468 96 aaKnown RBP8.33□□□□□ -1.08
LRP5-206ENST00000529993 RPS29P62273 56 aaKnown RBP8.32□□□□□ -1.08
LRP5-206ENST00000529993 ADM2Q7Z4H4 148 aa8.29□□□□□ -1.08
LRP5-206ENST00000529993 A6NN06 94 aa8.28□□□□□ -1.08
LRP5-206ENST00000529993 M0QZ58 72 aa8.28□□□□□ -1.08
LRP5-206ENST00000529993 ROMO1P60602 79 aa8.28□□□□□ -1.08
LRP5-206ENST00000529993 KRTAP1-4P0C5Y4 121 aa8.23□□□□□ -1.09
LRP5-206ENST00000529993 A8MUU9 505 aa8.14□□□□□ -1.11
LRP5-206ENST00000529993 BSNQ9UPA5 3926 aa8.12□□□□□ -1.11
LRP5-206ENST00000529993 C20orf166-AS1Q96NR2 134 aa8.11□□□□□ -1.11
LRP5-206ENST00000529993 H3BS24 57 aa8.11□□□□□ -1.11
LRP5-206ENST00000529993 SRRM2Q9UQ35 2752 aaKnown RBP8.06□□□□□ -1.12
LRP5-206ENST00000529993 TRRAPQ9Y4A5 3859 aa8.06□□□□□ -1.12
LRP5-206ENST00000529993 KRTAP21-3Q3LHN1 58 aa8.04□□□□□ -1.12
LRP5-206ENST00000529993 KRTAP25-1Q3LHN0 102 aa8.03□□□□□ -1.12
LRP5-206ENST00000529993 KRTAP16-1A8MUX0 517 aa8.02□□□□□ -1.13
LRP5-206ENST00000529993 FBN3Q75N90 2809 aa8□□□□□ -1.13
LRP5-206ENST00000529993 ANK3Q12955 4377 aaKnown RBP7.99□□□□□ -1.13
LRP5-206ENST00000529993 A0A0A0MQY5 61 aa7.97□□□□□ -1.13
LRP5-206ENST00000529993 XP32Q5T750 250 aa7.94□□□□□ -1.14
LRP5-206ENST00000529993 H0YAA0 97 aa7.87□□□□□ -1.15
LRP5-206ENST00000529993 KRTAP13-3Q3SY46 172 aa7.86□□□□□ -1.15
LRP5-206ENST00000529993 PLAC4Q8WY50 150 aa7.85□□□□□ -1.15
LRP5-206ENST00000529993 VPS13CQ709C8 3753 aa7.83□□□□□ -1.16
LRP5-206ENST00000529993 MEGF8Q7Z7M0 2845 aa7.79□□□□□ -1.16
LRP5-206ENST00000529993 COL7A1Q02388 2944 aa7.78□□□□□ -1.16
LRP5-206ENST00000529993 C10orf95Q9H7T3 257 aa7.76□□□□□ -1.17
LRP5-206ENST00000529993 P0C880 135 aa7.7□□□□□ -1.18
LRP5-206ENST00000529993 A0A1B0GVY2 172 aa7.69□□□□□ -1.18
LRP5-206ENST00000529993 NDUFAF8A1L188 74 aa7.69□□□□□ -1.18
LRP5-206ENST00000529993 TPRXLQ17RH7 258 aa7.66□□□□□ -1.18
LRP5-206ENST00000529993 KRTAP10-8P60410 259 aa7.64□□□□□ -1.19
LRP5-206ENST00000529993 ZNF469Q96JG9 3925 aaPredicted RBP7.59□□□□□ -1.19
LRP5-206ENST00000529993 TNP1P09430 55 aa7.58□□□□□ -1.2
LRP5-206ENST00000529993 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
LRP5-206ENST00000529993 CSMD3Q7Z407 3707 aa7.5□□□□□ -1.21
LRP5-206ENST00000529993 HUWE1Q7Z6Z7 4374 aaKnown RBP7.43□□□□□ -1.22
LRP5-206ENST00000529993 KRTAP12-2P59991 146 aa7.38□□□□□ -1.23
LRP5-206ENST00000529993 PP632Q6XCG6 107 aa7.35□□□□□ -1.23
LRP5-206ENST00000529993 KRTAP10-10P60014 251 aa7.33□□□□□ -1.24
LRP5-206ENST00000529993 AKAP9Q99996 3911 aa7.3□□□□□ -1.24
LRP5-206ENST00000529993 KRTAP13-4Q3LI77 160 aa7.26□□□□□ -1.25
LRP5-206ENST00000529993 KRTAP12-1P59990 96 aa7.26□□□□□ -1.25
LRP5-206ENST00000529993 KRTAP10-6P60371 365 aaPredicted RBP7.23□□□□□ -1.25
LRP5-206ENST00000529993 MT1HL1P0DM35 61 aa7.14□□□□□ -1.27
LRP5-206ENST00000529993 KRTAP10-4P60372 401 aaPredicted RBP7.13□□□□□ -1.27
LRP5-206ENST00000529993 DNAH9Q9NYC9 4486 aa7.12□□□□□ -1.27
LRP5-206ENST00000529993 KRTAP3-3Q9BYR6 98 aa7.06□□□□□ -1.28
LRP5-206ENST00000529993 PLECQ15149 4684 aaKnown RBP7.05□□□□□ -1.28
LRP5-206ENST00000529993 KRTAP3-2Q9BYR7 98 aa7.02□□□□□ -1.29
LRP5-206ENST00000529993 DNAH10Q8IVF4 4471 aa6.99□□□□□ -1.29
LRP5-206ENST00000529993 DNAH5Q8TE73 4624 aa6.99□□□□□ -1.29
LRP5-206ENST00000529993 KRTAP4-5Q9BYR2 181 aa6.99□□□□□ -1.29
LRP5-206ENST00000529993 DNAH11Q96DT5 4516 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms