RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 SPART-AS1P0CW21 52 aa1.1□□□□□ -2.23
CTR9-204ENST00000529355 PRRC2CQ9Y520 2896 aaKnown RBP1.1□□□□□ -2.23
CTR9-204ENST00000529355 DSPP15924 2871 aaKnown RBP1.1□□□□□ -2.23
CTR9-204ENST00000529355 UTRNP46939 3433 aa1.09□□□□□ -2.23
CTR9-204ENST00000529355 SETD2Q9BYW2 2564 aaPredicted RBP1.09□□□□□ -2.23
CTR9-204ENST00000529355 SONP18583 2426 aaKnown RBP1.09□□□□□ -2.23
CTR9-204ENST00000529355 DMBT1Q9UGM3 2413 aaPredicted RBP1.09□□□□□ -2.24
CTR9-204ENST00000529355 HTTP42858 3142 aa1.09□□□□□ -2.24
CTR9-204ENST00000529355 CENPFP49454 3210 aa1.08□□□□□ -2.24
CTR9-204ENST00000529355 GPR98Q8WXG9 6306 aa1.08□□□□□ -2.24
CTR9-204ENST00000529355 CHD9Q3L8U1 2897 aa1.08□□□□□ -2.24
CTR9-204ENST00000529355 PCNTO95613 3336 aa1.08□□□□□ -2.24
CTR9-204ENST00000529355 CEP350Q5VT06 3117 aa1.08□□□□□ -2.24
CTR9-204ENST00000529355 ANKHD1Q8IWZ3 2542 aaKnown RBP1.08□□□□□ -2.24
CTR9-204ENST00000529355 TNRC18O15417 2968 aaPredicted RBP1.08□□□□□ -2.24
CTR9-204ENST00000529355 U3KQA8 63 aa1.08□□□□□ -2.24
CTR9-204ENST00000529355 HIVEP3Q5T1R4 2406 aa1.07□□□□□ -2.24
CTR9-204ENST00000529355 C5orf42Q9H799 3197 aa1.07□□□□□ -2.24
CTR9-204ENST00000529355 SRCAPQ6ZRS2 3230 aa1.07□□□□□ -2.24
CTR9-204ENST00000529355 RIF1Q5UIP0 2472 aaKnown RBP1.07□□□□□ -2.24
CTR9-204ENST00000529355 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
CTR9-204ENST00000529355 RPS29P62273 56 aaKnown RBP1.06□□□□□ -2.24
CTR9-204ENST00000529355 ITPR1Q14643 2758 aa1.06□□□□□ -2.24
CTR9-204ENST00000529355 LAMA2P24043 3122 aaKnown RBP1.06□□□□□ -2.24
CTR9-204ENST00000529355 DOPEY1Q5JWR5 2465 aa1.06□□□□□ -2.24
CTR9-204ENST00000529355 BRCA2P51587 3418 aa1.05□□□□□ -2.24
CTR9-204ENST00000529355 SPTAN1Q13813 2472 aaKnown RBP1.05□□□□□ -2.24
CTR9-204ENST00000529355 LRRK2Q5S007 2527 aa1.05□□□□□ -2.24
CTR9-204ENST00000529355 TNP1P09430 55 aa1.05□□□□□ -2.24
CTR9-204ENST00000529355 ASH1LQ9NR48 2969 aaKnown RBP1.05□□□□□ -2.24
CTR9-204ENST00000529355 CHD6Q8TD26 2715 aa1.04□□□□□ -2.24
CTR9-204ENST00000529355 SRRM2Q9UQ35 2752 aaKnown RBP1.04□□□□□ -2.24
CTR9-204ENST00000529355 HTN3P15516 51 aa1.04□□□□□ -2.24
CTR9-204ENST00000529355 COL6A3P12111 3177 aa1.04□□□□□ -2.24
CTR9-204ENST00000529355 OTOGQ6ZRI0 2925 aa1.03□□□□□ -2.24
CTR9-204ENST00000529355 SPTBN5Q9NRC6 3674 aaKnown RBP1.03□□□□□ -2.25
CTR9-204ENST00000529355 TLN1Q9Y490 2541 aaKnown RBP1.03□□□□□ -2.25
CTR9-204ENST00000529355 TRANK1O15050 2925 aa1.02□□□□□ -2.25
CTR9-204ENST00000529355 UNC80Q8N2C7 3258 aa1.02□□□□□ -2.25
CTR9-204ENST00000529355 USP34Q70CQ2 3546 aa1.02□□□□□ -2.25
CTR9-204ENST00000529355 C9orf92A6NGG3 77 aa1.02□□□□□ -2.25
CTR9-204ENST00000529355 ACANP16112 2415 aa1.02□□□□□ -2.25
CTR9-204ENST00000529355 MKI67P46013 3256 aaKnown RBP1.02□□□□□ -2.25
CTR9-204ENST00000529355 DEFB135Q30KP9 77 aa1.02□□□□□ -2.25
CTR9-204ENST00000529355 EYSQ5T1H1 3165 aa1.02□□□□□ -2.25
CTR9-204ENST00000529355 MAP1AP78559 2803 aaPredicted RBP1.02□□□□□ -2.25
CTR9-204ENST00000529355 PIEZO1Q92508 2521 aa1.01□□□□□ -2.25
CTR9-204ENST00000529355 TRIOO75962 3097 aa1.01□□□□□ -2.25
CTR9-204ENST00000529355 CELSR2Q9HCU4 2923 aa1.01□□□□□ -2.25
CTR9-204ENST00000529355 CENPEQ02224 2701 aa1.01□□□□□ -2.25
CTR9-204ENST00000529355 LAMA3Q16787 3333 aa1□□□□□ -2.25
CTR9-204ENST00000529355 VWFP04275 2813 aa1□□□□□ -2.25
CTR9-204ENST00000529355 DNAH14Q0VDD8 3507 aa1□□□□□ -2.25
CTR9-204ENST00000529355 SZT2Q5T011 3432 aa1□□□□□ -2.25
CTR9-204ENST00000529355 XIRP2A4UGR9 3374 aa1□□□□□ -2.25
CTR9-204ENST00000529355 LAMA1P25391 3075 aa1□□□□□ -2.25
CTR9-204ENST00000529355 MEGF8Q7Z7M0 2845 aa0.99□□□□□ -2.25
CTR9-204ENST00000529355 CFAP54Q96N23 3096 aa0.99□□□□□ -2.25
CTR9-204ENST00000529355 PRUNE2Q8WUY3 3088 aa0.99□□□□□ -2.25
CTR9-204ENST00000529355 FRYLO94915 3013 aa0.99□□□□□ -2.25
CTR9-204ENST00000529355 EPG5Q9HCE0 2579 aa0.99□□□□□ -2.25
CTR9-204ENST00000529355 ZNF292O60281 2723 aa0.98□□□□□ -2.25
CTR9-204ENST00000529355 HECTD1Q9ULT8 2610 aa0.98□□□□□ -2.25
CTR9-204ENST00000529355 SPEGQ15772 3267 aa0.98□□□□□ -2.25
CTR9-204ENST00000529355 TLN2Q9Y4G6 2542 aa0.98□□□□□ -2.25
CTR9-204ENST00000529355 VCANP13611 3396 aa0.98□□□□□ -2.25
CTR9-204ENST00000529355 CDH23Q9H251 3354 aa0.98□□□□□ -2.25
CTR9-204ENST00000529355 DMDP11532 3685 aa0.98□□□□□ -2.25
CTR9-204ENST00000529355 NBEAQ8NFP9 2946 aa0.98□□□□□ -2.25
CTR9-204ENST00000529355 CACNA1AO00555 2505 aa0.97□□□□□ -2.25
CTR9-204ENST00000529355 MYO15AQ9UKN7 3530 aa0.97□□□□□ -2.25
CTR9-204ENST00000529355 ZZEF1O43149 2961 aa0.97□□□□□ -2.25
CTR9-204ENST00000529355 DEFB4AO15263 64 aa0.97□□□□□ -2.25
CTR9-204ENST00000529355 UTP20O75691 2785 aaKnown RBP0.97□□□□□ -2.25
CTR9-204ENST00000529355 RANBP2P49792 3224 aaKnown RBP0.97□□□□□ -2.25
CTR9-204ENST00000529355 UBR4Q5T4S7 5183 aa0.97□□□□□ -2.25
CTR9-204ENST00000529355 SETXQ7Z333 2677 aaKnown RBP0.97□□□□□ -2.25
CTR9-204ENST00000529355 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
CTR9-204ENST00000529355 AKAP13Q12802 2813 aa0.97□□□□□ -2.25
CTR9-204ENST00000529355 USP9XQ93008 2570 aaPredicted RBP0.97□□□□□ -2.25
CTR9-204ENST00000529355 CHD8Q9HCK8 2581 aa0.97□□□□□ -2.25
CTR9-204ENST00000529355 KRTAP5-10Q6L8G5 202 aa0.96□□□□□ -2.26
CTR9-204ENST00000529355 WDFY3Q8IZQ1 3526 aa0.95□□□□□ -2.26
CTR9-204ENST00000529355 VPS13AQ96RL7 3174 aa0.95□□□□□ -2.26
CTR9-204ENST00000529355 POLQO75417 2590 aa0.95□□□□□ -2.26
CTR9-204ENST00000529355 SPENQ96T58 3664 aaKnown RBP0.95□□□□□ -2.26
CTR9-204ENST00000529355 CFAP46Q8IYW2 2715 aa0.95□□□□□ -2.26
CTR9-204ENST00000529355 PCLOQ9Y6V0 5065 aa0.95□□□□□ -2.26
CTR9-204ENST00000529355 USP24Q9UPU5 2620 aa0.95□□□□□ -2.26
CTR9-204ENST00000529355 DCHS2Q6V1P9 2916 aa0.95□□□□□ -2.26
CTR9-204ENST00000529355 NOTCH1P46531 2555 aa0.95□□□□□ -2.26
CTR9-204ENST00000529355 MTORP42345 2549 aa0.94□□□□□ -2.26
CTR9-204ENST00000529355 FRYQ5TBA9 3013 aa0.94□□□□□ -2.26
CTR9-204ENST00000529355 DMXL1Q9Y485 3027 aa0.94□□□□□ -2.26
CTR9-204ENST00000529355 FREM2Q5SZK8 3169 aa0.94□□□□□ -2.26
CTR9-204ENST00000529355 WDFY4Q6ZS81 3184 aa0.94□□□□□ -2.26
CTR9-204ENST00000529355 APCP25054 2843 aa0.94□□□□□ -2.26
CTR9-204ENST00000529355 ZFHX4Q86UP3 3567 aa0.94□□□□□ -2.26
CTR9-204ENST00000529355 USP9YO00507 2555 aaPredicted RBP0.94□□□□□ -2.26
CTR9-204ENST00000529355 M0R2T5 61 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms