RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362		C9JAW5	83 aa		6.06	□□□□□ -1.44
PSMC3-205	ENST00000528362	LOR	P23490	312 aa	Predicted RBP	6.06	□□□□□ -1.44
PSMC3-205	ENST00000528362	KRTAP10-6	P60371	365 aa	Predicted RBP	6.06	□□□□□ -1.44
PSMC3-205	ENST00000528362	COL5A1-AS1	Q5SY13	56 aa		6.06	□□□□□ -1.44
PSMC3-205	ENST00000528362	IGHV6-1	A0A0B4J1U7	121 aa		6.05	□□□□□ -1.44
PSMC3-205	ENST00000528362	C9orf118	A6NHY6	69 aa		6.04	□□□□□ -1.44
PSMC3-205	ENST00000528362		M0R2T5	61 aa		6.04	□□□□□ -1.44
PSMC3-205	ENST00000528362	TAX1BP3	O14907	124 aa		6.04	□□□□□ -1.44
PSMC3-205	ENST00000528362		A0A1B0GVX0	72 aa		6.03	□□□□□ -1.44
PSMC3-205	ENST00000528362		Q6ZQT0	140 aa		6.03	□□□□□ -1.44
PSMC3-205	ENST00000528362	LOC110117498	A0A087WWA1	95 aa		6.02	□□□□□ -1.45
PSMC3-205	ENST00000528362	JMJD7-PLA2G4B	H0Y9G9	81 aa		6.02	□□□□□ -1.45
PSMC3-205	ENST00000528362	C21orf62-AS1	Q17RA5	79 aa		6.02	□□□□□ -1.45
PSMC3-205	ENST00000528362		A0A1W2PPM0	123 aa		6.01	□□□□□ -1.45
PSMC3-205	ENST00000528362	C8orf87	E5RJ46	101 aa		6.01	□□□□□ -1.45
PSMC3-205	ENST00000528362	TRBV20-1	A0A075B6N2	111 aa		6	□□□□□ -1.45
PSMC3-205	ENST00000528362		J3KT08	172 aa		6	□□□□□ -1.45
PSMC3-205	ENST00000528362	C14orf132	Q9NPU4	83 aa		6	□□□□□ -1.45
PSMC3-205	ENST00000528362	PDE6G	P18545	87 aa		5.98	□□□□□ -1.45
PSMC3-205	ENST00000528362		A0A1B0GW54	56 aa		5.97	□□□□□ -1.45
PSMC3-205	ENST00000528362	SPCS1	Q9Y6A9	102 aa		5.97	□□□□□ -1.45
PSMC3-205	ENST00000528362		A8MWP4	228 aa		5.94	□□□□□ -1.46
PSMC3-205	ENST00000528362	HRES1	P13985	223 aa		5.94	□□□□□ -1.46
PSMC3-205	ENST00000528362	MTURN	Q8N3F0	131 aa		5.94	□□□□□ -1.46
PSMC3-205	ENST00000528362	IGKV3D-7	A0A0C4DH55	119 aa		5.93	□□□□□ -1.46
PSMC3-205	ENST00000528362		H3BT86	120 aa		5.93	□□□□□ -1.46
PSMC3-205	ENST00000528362	NDUFB1	O75438	58 aa		5.93	□□□□□ -1.46
PSMC3-205	ENST00000528362	MPLKIP	Q8TAP9	179 aa		5.93	□□□□□ -1.46
PSMC3-205	ENST00000528362		K7EP34	96 aa		5.92	□□□□□ -1.46
PSMC3-205	ENST00000528362		Q8N9P0	234 aa	Predicted RBP	5.92	□□□□□ -1.46
PSMC3-205	ENST00000528362	ZCCHC13	Q8WW36	166 aa	Known RBP	5.92	□□□□□ -1.46
PSMC3-205	ENST00000528362	C8orf17	Q9NRJ1	99 aa		5.92	□□□□□ -1.46
PSMC3-205	ENST00000528362	GTF2H5	Q6ZYL4	71 aa		5.91	□□□□□ -1.46
PSMC3-205	ENST00000528362	NREP	Q16612	68 aa		5.9	□□□□□ -1.46
PSMC3-205	ENST00000528362	FAM236D	A0A1B0GTK5	79 aa		5.89	□□□□□ -1.47
PSMC3-205	ENST00000528362	FAM236C	P0DP71	79 aa		5.89	□□□□□ -1.47
PSMC3-205	ENST00000528362	PRR15	Q8IV56	129 aa		5.89	□□□□□ -1.47
PSMC3-205	ENST00000528362	LCE2B	O14633	110 aa		5.88	□□□□□ -1.47
PSMC3-205	ENST00000528362	RBM12B-AS1	Q9P1G2	102 aa		5.88	□□□□□ -1.47
PSMC3-205	ENST00000528362		Q6ZVQ6	151 aa		5.87	□□□□□ -1.47
PSMC3-205	ENST00000528362	KRTAP9-8	Q9BYQ0	159 aa		5.87	□□□□□ -1.47
PSMC3-205	ENST00000528362	SPINK7	P58062	85 aa		5.86	□□□□□ -1.47
PSMC3-205	ENST00000528362	MMP24-AS1	A0A0U1RRL7	71 aa		5.85	□□□□□ -1.47
PSMC3-205	ENST00000528362		K7EQZ3	153 aa		5.84	□□□□□ -1.47
PSMC3-205	ENST00000528362	SMCP	P49901	116 aa	Predicted RBP	5.84	□□□□□ -1.47
PSMC3-205	ENST00000528362	TMEM254	Q8TBM7	123 aa		5.82	□□□□□ -1.48
PSMC3-205	ENST00000528362	MRPL34	Q9BQ48	92 aa	Known RBP	5.81	□□□□□ -1.48
PSMC3-205	ENST00000528362	PRO0461	Q9UI25	63 aa		5.81	□□□□□ -1.48
PSMC3-205	ENST00000528362		A0A1B0GV90	55 aa		5.8	□□□□□ -1.48
PSMC3-205	ENST00000528362	hDV103S1	A0JD37	113 aa		5.8	□□□□□ -1.48
PSMC3-205	ENST00000528362		F8W1H4	67 aa		5.8	□□□□□ -1.48
PSMC3-205	ENST00000528362	BPY2	O14599	106 aa		5.8	□□□□□ -1.48
PSMC3-205	ENST00000528362	MT2A	P02795	61 aa		5.79	□□□□□ -1.48
PSMC3-205	ENST00000528362	WFDC13	Q8IUB5	93 aa		5.78	□□□□□ -1.48
PSMC3-205	ENST00000528362		Q8N9L7	120 aa		5.76	□□□□□ -1.49
PSMC3-205	ENST00000528362	USH2A	O75445	5202 aa		5.75	□□□□□ -1.49
PSMC3-205	ENST00000528362	NDUFS5	O43920	106 aa		5.75	□□□□□ -1.49
PSMC3-205	ENST00000528362	MT1F	P04733	61 aa		5.75	□□□□□ -1.49
PSMC3-205	ENST00000528362	SSPO	A2VEC9	5147 aa		5.75	□□□□□ -1.49
PSMC3-205	ENST00000528362	ETDB	Q3ZM63	59 aa		5.74	□□□□□ -1.49
PSMC3-205	ENST00000528362	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.73	□□□□□ -1.49
PSMC3-205	ENST00000528362	LINC00846	Q9NV44	126 aa		5.73	□□□□□ -1.49
PSMC3-205	ENST00000528362	KRTAP9-7	A8MTY7	169 aa		5.72	□□□□□ -1.49
PSMC3-205	ENST00000528362		Q5W150	140 aa		5.71	□□□□□ -1.5
PSMC3-205	ENST00000528362	CASC2	Q6XLA1	102 aa		5.71	□□□□□ -1.5
PSMC3-205	ENST00000528362	UBL5	Q9BZL1	73 aa		5.7	□□□□□ -1.5
PSMC3-205	ENST00000528362	KRTAP10-10	P60014	251 aa		5.69	□□□□□ -1.5
PSMC3-205	ENST00000528362	IGKV2D-30	A0A075B6S6	120 aa		5.68	□□□□□ -1.5
PSMC3-205	ENST00000528362	HCG22	E2RYF7	251 aa		5.68	□□□□□ -1.5
PSMC3-205	ENST00000528362	IGKV2-30	P06310	120 aa		5.68	□□□□□ -1.5
PSMC3-205	ENST00000528362	KRTAP9-3	Q9BYQ3	159 aa		5.68	□□□□□ -1.5
PSMC3-205	ENST00000528362	C7orf65	Q6ZTY9	151 aa		5.67	□□□□□ -1.5
PSMC3-205	ENST00000528362	H1FX-AS1	Q4G0G2	97 aa		5.64	□□□□□ -1.51
PSMC3-205	ENST00000528362	CXCL6	P80162	114 aa		5.63	□□□□□ -1.51
PSMC3-205	ENST00000528362	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.62	□□□□□ -1.51
PSMC3-205	ENST00000528362	ACYP1	P07311	99 aa		5.6	□□□□□ -1.51
PSMC3-205	ENST00000528362	FAM240A	A0A1B0GVK7	77 aa		5.59	□□□□□ -1.51
PSMC3-205	ENST00000528362		J3QR89	54 aa		5.59	□□□□□ -1.51
PSMC3-205	ENST00000528362	C4orf26	Q17RF5	130 aa		5.59	□□□□□ -1.51
PSMC3-205	ENST00000528362	KRTAP19-1	Q8IUB9	90 aa		5.53	□□□□□ -1.52
PSMC3-205	ENST00000528362	TP53AIP1	Q9HCN2	124 aa		5.53	□□□□□ -1.52
PSMC3-205	ENST00000528362	ATP5EP2	Q5VTU8	51 aa		5.52	□□□□□ -1.53
PSMC3-205	ENST00000528362	KRTAP3-1	Q9BYR8	98 aa		5.52	□□□□□ -1.53
PSMC3-205	ENST00000528362	LOC100996750	A0A140TA64	210 aa		5.5	□□□□□ -1.53
PSMC3-205	ENST00000528362		K7ERU9	68 aa		5.5	□□□□□ -1.53
PSMC3-205	ENST00000528362	KRTAP4-6	Q9BYQ5	205 aa		5.5	□□□□□ -1.53
PSMC3-205	ENST00000528362	SYNE2	Q8WXH0	6885 aa	Known RBP	5.49	□□□□□ -1.53
PSMC3-205	ENST00000528362	MACF1	Q9UPN3	7388 aa	Known RBP	5.49	□□□□□ -1.53
PSMC3-205	ENST00000528362	LINC00643	Q86TS7	51 aa		5.48	□□□□□ -1.53
PSMC3-205	ENST00000528362	C1orf64	Q8NEQ6	169 aa		5.47	□□□□□ -1.53
PSMC3-205	ENST00000528362	HIST1H4A	P62805	103 aa	Known RBP	5.46	□□□□□ -1.54
PSMC3-205	ENST00000528362	C5orf47	Q569G3	176 aa		5.46	□□□□□ -1.54
PSMC3-205	ENST00000528362		S4R3F8	94 aa		5.45	□□□□□ -1.54
PSMC3-205	ENST00000528362	KRTAP19-6	Q3LI70	58 aa		5.44	□□□□□ -1.54
PSMC3-205	ENST00000528362	CYP4F30P	Q9H0H9	118 aa		5.44	□□□□□ -1.54
PSMC3-205	ENST00000528362	TRAV22	A0A0B4J277	110 aa		5.43	□□□□□ -1.54
PSMC3-205	ENST00000528362	LCA10	Q71F78	164 aa		5.43	□□□□□ -1.54
PSMC3-205	ENST00000528362	LOC101927531	A0A1B0GV80	90 aa		5.4	□□□□□ -1.54
PSMC3-205	ENST00000528362	CSAG1	Q6PB30	78 aa		5.4	□□□□□ -1.54
PSMC3-205	ENST00000528362		A0A087WVE0	104 aa		5.37	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 274.7 ms