RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 VCANP13611 3396 aa4.05□□□□□ -1.76
CTNND1-216ENST00000527467 APCP25054 2843 aa4.04□□□□□ -1.76
CTNND1-216ENST00000527467 ITPR1Q14643 2758 aa4.04□□□□□ -1.76
CTNND1-216ENST00000527467 Q6ZRN7 208 aaPredicted RBP4.03□□□□□ -1.76
CTNND1-216ENST00000527467 WDFY4Q6ZS81 3184 aa4.03□□□□□ -1.76
CTNND1-216ENST00000527467 DNAH14Q0VDD8 3507 aa4.03□□□□□ -1.76
CTNND1-216ENST00000527467 A0A1B0GVY2 172 aa4.02□□□□□ -1.77
CTNND1-216ENST00000527467 MAP1AP78559 2803 aaPredicted RBP4.02□□□□□ -1.77
CTNND1-216ENST00000527467 KRTAP10-8P60410 259 aa4.01□□□□□ -1.77
CTNND1-216ENST00000527467 MGAQ8IWI9 3026 aa4□□□□□ -1.77
CTNND1-216ENST00000527467 LAMA1P25391 3075 aa4□□□□□ -1.77
CTNND1-216ENST00000527467 DCHS1Q96JQ0 3298 aa4□□□□□ -1.77
CTNND1-216ENST00000527467 FBN3Q75N90 2809 aa4□□□□□ -1.77
CTNND1-216ENST00000527467 VPS13AQ96RL7 3174 aa4□□□□□ -1.77
CTNND1-216ENST00000527467 WDFY3Q8IZQ1 3526 aa3.99□□□□□ -1.77
CTNND1-216ENST00000527467 CFAP54Q96N23 3096 aa3.99□□□□□ -1.77
CTNND1-216ENST00000527467 ZFHX4Q86UP3 3567 aa3.98□□□□□ -1.77
CTNND1-216ENST00000527467 FRYLO94915 3013 aa3.94□□□□□ -1.78
CTNND1-216ENST00000527467 UTP20O75691 2785 aaKnown RBP3.92□□□□□ -1.78
CTNND1-216ENST00000527467 FRYQ5TBA9 3013 aa3.9□□□□□ -1.78
CTNND1-216ENST00000527467 H0YAA0 97 aa3.9□□□□□ -1.79
CTNND1-216ENST00000527467 SPENQ96T58 3664 aaKnown RBP3.89□□□□□ -1.79
CTNND1-216ENST00000527467 SPEGQ15772 3267 aa3.88□□□□□ -1.79
CTNND1-216ENST00000527467 DMXL2Q8TDJ6 3036 aa3.87□□□□□ -1.79
CTNND1-216ENST00000527467 FBN2P35556 2912 aa3.86□□□□□ -1.79
CTNND1-216ENST00000527467 AKAP9Q99996 3911 aa3.86□□□□□ -1.79
CTNND1-216ENST00000527467 TPRXLQ17RH7 258 aa3.86□□□□□ -1.79
CTNND1-216ENST00000527467 PRO2289Q9P1D8 64 aa3.85□□□□□ -1.79
CTNND1-216ENST00000527467 ASPMQ8IZT6 3477 aa3.85□□□□□ -1.79
CTNND1-216ENST00000527467 KRTAP13-2Q52LG2 175 aa3.83□□□□□ -1.8
CTNND1-216ENST00000527467 FREM2Q5SZK8 3169 aa3.83□□□□□ -1.8
CTNND1-216ENST00000527467 NBEAQ8NFP9 2946 aa3.83□□□□□ -1.8
CTNND1-216ENST00000527467 CELSR3Q9NYQ7 3312 aa3.81□□□□□ -1.8
CTNND1-216ENST00000527467 ATMQ13315 3056 aa3.81□□□□□ -1.8
CTNND1-216ENST00000527467 PDZD2O15018 2839 aa3.81□□□□□ -1.8
CTNND1-216ENST00000527467 ANK3Q12955 4377 aaKnown RBP3.8□□□□□ -1.8
CTNND1-216ENST00000527467 LAMA5O15230 3695 aa3.8□□□□□ -1.8
CTNND1-216ENST00000527467 KRTAP13-1Q8IUC0 172 aa3.79□□□□□ -1.8
CTNND1-216ENST00000527467 ZZEF1O43149 2961 aa3.78□□□□□ -1.8
CTNND1-216ENST00000527467 KALRNO60229 2985 aa3.78□□□□□ -1.8
CTNND1-216ENST00000527467 MXRA5Q9NR99 2828 aa3.77□□□□□ -1.81
CTNND1-216ENST00000527467 KRTAP17-1Q9BYP8 105 aa3.77□□□□□ -1.81
CTNND1-216ENST00000527467 NBPF19A0A087WUL8 3843 aa3.77□□□□□ -1.81
CTNND1-216ENST00000527467 CFAP47Q6ZTR5 3102 aa3.77□□□□□ -1.81
CTNND1-216ENST00000527467 LOC400499M0QZD8 3231 aa3.76□□□□□ -1.81
CTNND1-216ENST00000527467 INE1O15225 51 aa3.76□□□□□ -1.81
CTNND1-216ENST00000527467 COL12A1Q99715 3063 aa3.76□□□□□ -1.81
CTNND1-216ENST00000527467 KRTAP7-1Q8IUC3 87 aa3.75□□□□□ -1.81
CTNND1-216ENST00000527467 CRYBG3Q68DQ2 2970 aa3.75□□□□□ -1.81
CTNND1-216ENST00000527467 OTOGQ6ZRI0 2925 aa3.74□□□□□ -1.81
CTNND1-216ENST00000527467 NIPBLQ6KC79 2804 aaeCLIP3.74□□□□□ -1.811e-6■□□□□ 9
CTNND1-216ENST00000527467 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
CTNND1-216ENST00000527467 HRNRQ86YZ3 2850 aaPredicted RBP3.73□□□□□ -1.81
CTNND1-216ENST00000527467 BOD1L1Q8NFC6 3051 aa3.72□□□□□ -1.81
CTNND1-216ENST00000527467 TENM2Q9NT68 2774 aa3.72□□□□□ -1.81
CTNND1-216ENST00000527467 ADGRG4Q8IZF6 3080 aa3.72□□□□□ -1.81
CTNND1-216ENST00000527467 KRTAP10-10P60014 251 aa3.72□□□□□ -1.81
CTNND1-216ENST00000527467 SMG1Q96Q15 3661 aaKnown RBP3.71□□□□□ -1.81
CTNND1-216ENST00000527467 LRBAP50851 2863 aa3.71□□□□□ -1.81
CTNND1-216ENST00000527467 ANK2Q01484 3957 aa3.7□□□□□ -1.82
CTNND1-216ENST00000527467 XP32Q5T750 250 aa3.68□□□□□ -1.82
CTNND1-216ENST00000527467 KRTAP13-4Q3LI77 160 aa3.67□□□□□ -1.82
CTNND1-216ENST00000527467 TENM3Q9P273 2699 aa3.63□□□□□ -1.83
CTNND1-216ENST00000527467 TACC2O95359 2948 aa3.63□□□□□ -1.83
CTNND1-216ENST00000527467 CELSR2Q9HCU4 2923 aa3.62□□□□□ -1.83
CTNND1-216ENST00000527467 NF1P21359 2839 aa3.62□□□□□ -1.83
CTNND1-216ENST00000527467 KRTAP15-1Q3LI76 137 aa3.62□□□□□ -1.83
CTNND1-216ENST00000527467 CMYA5Q8N3K9 4069 aa3.62□□□□□ -1.83
CTNND1-216ENST00000527467 RELNP78509 3460 aa3.62□□□□□ -1.83
CTNND1-216ENST00000527467 DNAH3Q8TD57 4116 aa3.61□□□□□ -1.83
CTNND1-216ENST00000527467 KRTAP1-4P0C5Y4 121 aa3.61□□□□□ -1.83
CTNND1-216ENST00000527467 ZNF469Q96JG9 3925 aaPredicted RBP3.6□□□□□ -1.83
CTNND1-216ENST00000527467 KRTAP13-3Q3SY46 172 aa3.6□□□□□ -1.83
CTNND1-216ENST00000527467 NBEAL2Q6ZNJ1 2754 aa3.59□□□□□ -1.83
CTNND1-216ENST00000527467 TENM1Q9UKZ4 2725 aa3.57□□□□□ -1.84
CTNND1-216ENST00000527467 ALMS1Q8TCU4 4167 aa3.57□□□□□ -1.84
CTNND1-216ENST00000527467 VPS13CQ709C8 3753 aa3.56□□□□□ -1.84
CTNND1-216ENST00000527467 PKD1L1Q8TDX9 2849 aa3.55□□□□□ -1.84
CTNND1-216ENST00000527467 DCHS2Q6V1P9 2916 aa3.55□□□□□ -1.84
CTNND1-216ENST00000527467 KRTAP4-5Q9BYR2 181 aa3.54□□□□□ -1.84
CTNND1-216ENST00000527467 KRTAP12-1P59990 96 aa3.54□□□□□ -1.84
CTNND1-216ENST00000527467 CSMD2Q7Z408 3487 aa3.53□□□□□ -1.84
CTNND1-216ENST00000527467 CSMD1Q96PZ7 3565 aa3.51□□□□□ -1.85
CTNND1-216ENST00000527467 ZANQ9Y493 2812 aa3.5□□□□□ -1.85
CTNND1-216ENST00000527467 FBN1P35555 2871 aaKnown RBP3.5□□□□□ -1.85
CTNND1-216ENST00000527467 MT1HL1P0DM35 61 aa3.49□□□□□ -1.85
CTNND1-216ENST00000527467 DNAH6Q9C0G6 4158 aa3.47□□□□□ -1.85
CTNND1-216ENST00000527467 SVEP1Q4LDE5 3571 aa3.47□□□□□ -1.85
CTNND1-216ENST00000527467 DYNC2H1Q8NCM8 4307 aaKnown RBP3.46□□□□□ -1.86
CTNND1-216ENST00000527467 CUBNO60494 3623 aa3.46□□□□□ -1.86
CTNND1-216ENST00000527467 KRTAP23-1A1A580 65 aa3.45□□□□□ -1.86
CTNND1-216ENST00000527467 TGP01266 2768 aa3.45□□□□□ -1.86
CTNND1-216ENST00000527467 ZFHX3Q15911 3703 aa3.43□□□□□ -1.86
CTNND1-216ENST00000527467 DNAH9Q9NYC9 4486 aa3.41□□□□□ -1.86
CTNND1-216ENST00000527467 HUWE1Q7Z6Z7 4374 aaKnown RBP3.41□□□□□ -1.86
CTNND1-216ENST00000527467 VWFP04275 2813 aa3.41□□□□□ -1.86
CTNND1-216ENST00000527467 DNAH7Q8WXX0 4024 aa3.41□□□□□ -1.86
CTNND1-216ENST00000527467 KRTAP3-3Q9BYR6 98 aa3.39□□□□□ -1.87
CTNND1-216ENST00000527467 KRTAP3-2Q9BYR7 98 aa3.39□□□□□ -1.87
CTNND1-216ENST00000527467 CELSR1Q9NYQ6 3014 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms