RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 SMIM20Q8N5G0 67 aa11.66□□□□□ -0.54
SMCO4-203ENST00000526869 FAT3Q8TDW7 4589 aa11.65□□□□□ -0.54
SMCO4-203ENST00000526869 MMP24-AS1A0A0U1RRL7 71 aa11.64□□□□□ -0.55
SMCO4-203ENST00000526869 KRTAP29-1A8MX34 341 aaPredicted RBP11.63□□□□□ -0.55
SMCO4-203ENST00000526869 C8orf17Q9NRJ1 99 aa11.63□□□□□ -0.55
SMCO4-203ENST00000526869 IGHV6-1A0A0B4J1U7 121 aa11.62□□□□□ -0.55
SMCO4-203ENST00000526869 CASC2Q6XLA1 102 aa11.62□□□□□ -0.55
SMCO4-203ENST00000526869 C8orf87E5RJ46 101 aa11.61□□□□□ -0.55
SMCO4-203ENST00000526869 OXTP01178 125 aa11.61□□□□□ -0.55
SMCO4-203ENST00000526869 LRP1Q07954 4544 aaKnown RBP11.61□□□□□ -0.55
SMCO4-203ENST00000526869 TNXBP22105 4242 aa11.6□□□□□ -0.55
SMCO4-203ENST00000526869 WFDC13Q8IUB5 93 aa11.59□□□□□ -0.55
SMCO4-203ENST00000526869 SERP2Q8N6R1 65 aa11.59□□□□□ -0.55
SMCO4-203ENST00000526869 TRAV7A0A075B6U4 112 aa11.58□□□□□ -0.56
SMCO4-203ENST00000526869 hDV103S1A0JD37 113 aa11.57□□□□□ -0.56
SMCO4-203ENST00000526869 MT1HL1P0DM35 61 aa11.56□□□□□ -0.56
SMCO4-203ENST00000526869 FLG2Q5D862 2391 aaPredicted RBP11.56□□□□□ -0.56
SMCO4-203ENST00000526869 OCR1Q9BZK8 76 aa11.55□□□□□ -0.56
SMCO4-203ENST00000526869 TMEM254Q8TBM7 123 aa11.54□□□□□ -0.56
SMCO4-203ENST00000526869 KRTAP4-5Q9BYR2 181 aa11.54□□□□□ -0.56
SMCO4-203ENST00000526869 COX7CP15954 63 aa11.53□□□□□ -0.56
SMCO4-203ENST00000526869 UQCRQO14949 82 aa11.5□□□□□ -0.57
SMCO4-203ENST00000526869 LINC00313P59037 77 aa11.5□□□□□ -0.57
SMCO4-203ENST00000526869 NOTCH2NLQ7Z3S9 236 aa11.5□□□□□ -0.57
SMCO4-203ENST00000526869 MRPL34Q9BQ48 92 aaKnown RBP11.49□□□□□ -0.57
SMCO4-203ENST00000526869 MYCBP2O75592 4640 aa11.49□□□□□ -0.57
SMCO4-203ENST00000526869 FP248Q71RG6 208 aaPredicted RBP11.43□□□□□ -0.58
SMCO4-203ENST00000526869 TP53AIP1Q9HCN2 124 aa11.42□□□□□ -0.58
SMCO4-203ENST00000526869 CCDC179H3BU77 68 aa11.41□□□□□ -0.58
SMCO4-203ENST00000526869 KRTAP16-1A8MUX0 517 aa11.4□□□□□ -0.58
SMCO4-203ENST00000526869 RETNLBQ9BQ08 111 aa11.4□□□□□ -0.58
SMCO4-203ENST00000526869 C5orf47Q569G3 176 aa11.37□□□□□ -0.59
SMCO4-203ENST00000526869 Q8N9P0 234 aaPredicted RBP11.37□□□□□ -0.59
SMCO4-203ENST00000526869 DMBT1Q9UGM3 2413 aaPredicted RBP11.35□□□□□ -0.59
SMCO4-203ENST00000526869 NDUFS5O43920 106 aa11.34□□□□□ -0.59
SMCO4-203ENST00000526869 C20orf197Q8N268 126 aa11.32□□□□□ -0.6
SMCO4-203ENST00000526869 ABCA13Q86UQ4 5058 aa11.32□□□□□ -0.6
SMCO4-203ENST00000526869 KLKP1Q107X0 134 aa11.3□□□□□ -0.6
SMCO4-203ENST00000526869 TRAV22A0A0B4J277 110 aa11.28□□□□□ -0.6
SMCO4-203ENST00000526869 H3BPC8 53 aa11.28□□□□□ -0.6
SMCO4-203ENST00000526869 MP68P56378 58 aa11.28□□□□□ -0.6
SMCO4-203ENST00000526869 UBR4Q5T4S7 5183 aa11.28□□□□□ -0.6
SMCO4-203ENST00000526869 A0A0U1RQV1 116 aa11.27□□□□□ -0.61
SMCO4-203ENST00000526869 H0Y9P7 68 aa11.27□□□□□ -0.61
SMCO4-203ENST00000526869 IGLV7-46A0A075B6I9 117 aa11.25□□□□□ -0.61
SMCO4-203ENST00000526869 C9orf92A6NGG3 77 aa11.23□□□□□ -0.61
SMCO4-203ENST00000526869 J3QL48 77 aa11.23□□□□□ -0.61
SMCO4-203ENST00000526869 C20orf166-AS1Q96NR2 134 aa11.22□□□□□ -0.61
SMCO4-203ENST00000526869 A8MUU9 505 aa11.21□□□□□ -0.61
SMCO4-203ENST00000526869 KRTAP13-3Q3SY46 172 aa11.21□□□□□ -0.61
SMCO4-203ENST00000526869 ZCCHC13Q8WW36 166 aaKnown RBP11.21□□□□□ -0.61
SMCO4-203ENST00000526869 SNURFQ9Y675 71 aa11.2□□□□□ -0.62
SMCO4-203ENST00000526869 NDUFC1O43677 76 aa11.19□□□□□ -0.62
SMCO4-203ENST00000526869 LINC00208Q96KT6 92 aa11.17□□□□□ -0.62
SMCO4-203ENST00000526869 CYSTM1Q9H1C7 97 aa11.17□□□□□ -0.62
SMCO4-203ENST00000526869 Q5W150 140 aa11.16□□□□□ -0.62
SMCO4-203ENST00000526869 PRR4Q16378 134 aa11.15□□□□□ -0.62
SMCO4-203ENST00000526869 Q75L30 129 aa11.14□□□□□ -0.63
SMCO4-203ENST00000526869 C1orf64Q8NEQ6 169 aa11.14□□□□□ -0.63
SMCO4-203ENST00000526869 LOC101927531A0A1B0GV80 90 aa11.11□□□□□ -0.63
SMCO4-203ENST00000526869 H7BZZ5 65 aa11.1□□□□□ -0.63
SMCO4-203ENST00000526869 TPRXLQ17RH7 258 aa11.1□□□□□ -0.63
SMCO4-203ENST00000526869 TMEM258P61165 79 aa11.06□□□□□ -0.64
SMCO4-203ENST00000526869 XP32Q5T750 250 aa11.05□□□□□ -0.64
SMCO4-203ENST00000526869 HERC1Q15751 4861 aa11.02□□□□□ -0.64
SMCO4-203ENST00000526869 IGKV2-30P06310 120 aa11.02□□□□□ -0.65
SMCO4-203ENST00000526869 RPL37P61927 97 aaKnown RBP11.02□□□□□ -0.65
SMCO4-203ENST00000526869 CYP4F30PQ9H0H9 118 aa11□□□□□ -0.65
SMCO4-203ENST00000526869 ATP5EP56381 51 aaPredicted RBP10.96□□□□□ -0.65
SMCO4-203ENST00000526869 ATP11AUNQ6ZP68 121 aa10.94□□□□□ -0.66
SMCO4-203ENST00000526869 FAM236DA0A1B0GTK5 79 aa10.93□□□□□ -0.66
SMCO4-203ENST00000526869 FAM236CP0DP71 79 aa10.93□□□□□ -0.66
SMCO4-203ENST00000526869 SPANXA2-OT1Q8N9U9 137 aa10.93□□□□□ -0.66
SMCO4-203ENST00000526869 C7orf65Q6ZTY9 151 aa10.92□□□□□ -0.66
SMCO4-203ENST00000526869 PCOTHQ58A44 107 aa10.91□□□□□ -0.66
SMCO4-203ENST00000526869 IGKV2D-30A0A075B6S6 120 aa10.9□□□□□ -0.66
SMCO4-203ENST00000526869 HRES1P13985 223 aa10.8□□□□□ -0.68
SMCO4-203ENST00000526869 SPINK7P58062 85 aa10.8□□□□□ -0.68
SMCO4-203ENST00000526869 SEC61BP60468 96 aaKnown RBP10.72□□□□□ -0.69
SMCO4-203ENST00000526869 SERP1Q9Y6X1 66 aa10.72□□□□□ -0.69
SMCO4-203ENST00000526869 LPAP08519 4548 aa10.72□□□□□ -0.69
SMCO4-203ENST00000526869 LRP2P98164 4655 aa10.71□□□□□ -0.69
SMCO4-203ENST00000526869 RPS28P62857 69 aaKnown RBP10.7□□□□□ -0.7
SMCO4-203ENST00000526869 DMAC1Q96GE9 116 aa10.68□□□□□ -0.7
SMCO4-203ENST00000526869 HMCN2Q8NDA2 5059 aa10.62□□□□□ -0.71
SMCO4-203ENST00000526869 A8MUN3 132 aa10.62□□□□□ -0.71
SMCO4-203ENST00000526869 C4orf26Q17RF5 130 aa10.61□□□□□ -0.71
SMCO4-203ENST00000526869 ACYP2P14621 99 aa10.6□□□□□ -0.71
SMCO4-203ENST00000526869 MUC17Q685J3 4493 aa10.56□□□□□ -0.72
SMCO4-203ENST00000526869 COX6B2Q6YFQ2 88 aa10.56□□□□□ -0.72
SMCO4-203ENST00000526869 COA5Q86WW8 74 aa10.55□□□□□ -0.72
SMCO4-203ENST00000526869 MPLKIPQ8TAP9 179 aa10.49□□□□□ -0.73
SMCO4-203ENST00000526869 KRTAP3-1Q9BYR8 98 aa10.49□□□□□ -0.73
SMCO4-203ENST00000526869 SMIM26A0A096LP01 95 aa10.43□□□□□ -0.74
SMCO4-203ENST00000526869 RBM12B-AS1Q9P1G2 102 aa10.42□□□□□ -0.74
SMCO4-203ENST00000526869 CHKB-CPT1BH3BT56 60 aa10.4□□□□□ -0.74
SMCO4-203ENST00000526869 KRTAP4-1Q9BYQ7 146 aa10.4□□□□□ -0.74
SMCO4-203ENST00000526869 H1FX-AS1Q4G0G2 97 aa10.31□□□□□ -0.76
SMCO4-203ENST00000526869 SPTSSBQ8NFR3 76 aa10.27□□□□□ -0.77
SMCO4-203ENST00000526869 V9GYY9 64 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms