RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 ITPR2Q14571 2701 aa7.13□□□□□ -1.27
FGFR1-227ENST00000526570 NSD1Q96L73 2696 aaPredicted RBP7.12□□□□□ -1.27
FGFR1-227ENST00000526570 ITPR1Q14643 2758 aa7.11□□□□□ -1.27
FGFR1-227ENST00000526570 C10orf95Q9H7T3 257 aa7.1□□□□□ -1.27
FGFR1-227ENST00000526570 WDFY3Q8IZQ1 3526 aa7.1□□□□□ -1.27
FGFR1-227ENST00000526570 NBEAQ8NFP9 2946 aa7.1□□□□□ -1.27
FGFR1-227ENST00000526570 LRBAP50851 2863 aa7.09□□□□□ -1.27
FGFR1-227ENST00000526570 STAB2Q8WWQ8 2551 aa7.09□□□□□ -1.27
FGFR1-227ENST00000526570 TACC2O95359 2948 aa7.08□□□□□ -1.28
FGFR1-227ENST00000526570 UTP20O75691 2785 aaKnown RBP7.08□□□□□ -1.28
FGFR1-227ENST00000526570 KRTAP21-3Q3LHN1 58 aa7.08□□□□□ -1.28
FGFR1-227ENST00000526570 DMXL1Q9Y485 3027 aa7.07□□□□□ -1.28
FGFR1-227ENST00000526570 ADGRG4Q8IZF6 3080 aa7.05□□□□□ -1.28
FGFR1-227ENST00000526570 KALRNO60229 2985 aa7.04□□□□□ -1.28
FGFR1-227ENST00000526570 HIVEP1P15822 2718 aa7.03□□□□□ -1.28
FGFR1-227ENST00000526570 P0C880 135 aa7.03□□□□□ -1.28
FGFR1-227ENST00000526570 M0R2T5 61 aa7.02□□□□□ -1.28
FGFR1-227ENST00000526570 Q6ZRN7 208 aaPredicted RBP7.01□□□□□ -1.29
FGFR1-227ENST00000526570 APCP25054 2843 aa6.98□□□□□ -1.29
FGFR1-227ENST00000526570 PP632Q6XCG6 107 aa6.96□□□□□ -1.3
FGFR1-227ENST00000526570 DMDP11532 3685 aa6.94□□□□□ -1.3
FGFR1-227ENST00000526570 KRTAP7-1Q8IUC3 87 aa6.93□□□□□ -1.3
FGFR1-227ENST00000526570 ASH1LQ9NR48 2969 aaKnown RBP6.92□□□□□ -1.3
FGFR1-227ENST00000526570 KMT2BQ9UMN6 2715 aaPredicted RBP6.91□□□□□ -1.3
FGFR1-227ENST00000526570 LOC400499M0QZD8 3231 aa6.91□□□□□ -1.3
FGFR1-227ENST00000526570 RPS29P62273 56 aaKnown RBP6.9□□□□□ -1.3
FGFR1-227ENST00000526570 ZZEF1O43149 2961 aa6.89□□□□□ -1.31
FGFR1-227ENST00000526570 CFAP47Q6ZTR5 3102 aa6.89□□□□□ -1.31
FGFR1-227ENST00000526570 H0YAA0 97 aa6.87□□□□□ -1.31
FGFR1-227ENST00000526570 CRYBG3Q68DQ2 2970 aa6.85□□□□□ -1.31
FGFR1-227ENST00000526570 ZFHX4Q86UP3 3567 aa6.85□□□□□ -1.31
FGFR1-227ENST00000526570 TNP1P09430 55 aa6.83□□□□□ -1.32
FGFR1-227ENST00000526570 HRNRQ86YZ3 2850 aaPredicted RBP6.82□□□□□ -1.32
FGFR1-227ENST00000526570 ASPMQ8IZT6 3477 aa6.82□□□□□ -1.32
FGFR1-227ENST00000526570 NIPBLQ6KC79 2804 aaeCLIP6.81□□□□□ -1.32
FGFR1-227ENST00000526570 CELSR2Q9HCU4 2923 aa6.81□□□□□ -1.32
FGFR1-227ENST00000526570 TENM4Q6N022 2769 aa6.8□□□□□ -1.32
FGFR1-227ENST00000526570 ZANQ9Y493 2812 aa6.76□□□□□ -1.33
FGFR1-227ENST00000526570 KRTAP13-2Q52LG2 175 aa6.76□□□□□ -1.33
FGFR1-227ENST00000526570 KRTAP13-1Q8IUC0 172 aa6.75□□□□□ -1.33
FGFR1-227ENST00000526570 KRTAP10-8P60410 259 aa6.73□□□□□ -1.33
FGFR1-227ENST00000526570 DCHS1Q96JQ0 3298 aa6.73□□□□□ -1.33
FGFR1-227ENST00000526570 SMG1Q96Q15 3661 aaKnown RBP6.72□□□□□ -1.33
FGFR1-227ENST00000526570 MUC3AQ02505 3323 aa6.72□□□□□ -1.33
FGFR1-227ENST00000526570 DCHS2Q6V1P9 2916 aa6.71□□□□□ -1.34
FGFR1-227ENST00000526570 LAMA5O15230 3695 aa6.7□□□□□ -1.34
FGFR1-227ENST00000526570 RELNP78509 3460 aa6.64□□□□□ -1.35
FGFR1-227ENST00000526570 CSMD1Q96PZ7 3565 aa6.64□□□□□ -1.35
FGFR1-227ENST00000526570 FBN2P35556 2912 aa6.6□□□□□ -1.35
FGFR1-227ENST00000526570 NF1P21359 2839 aa6.56□□□□□ -1.36
FGFR1-227ENST00000526570 SPENQ96T58 3664 aaKnown RBP6.55□□□□□ -1.36
FGFR1-227ENST00000526570 TENM3Q9P273 2699 aa6.5□□□□□ -1.37
FGFR1-227ENST00000526570 KRTAP1-4P0C5Y4 121 aa6.49□□□□□ -1.37
FGFR1-227ENST00000526570 TPRXLQ17RH7 258 aa6.49□□□□□ -1.37
FGFR1-227ENST00000526570 PDZD2O15018 2839 aa6.49□□□□□ -1.37
FGFR1-227ENST00000526570 NBPF19A0A087WUL8 3843 aa6.48□□□□□ -1.37
FGFR1-227ENST00000526570 SVEP1Q4LDE5 3571 aa6.48□□□□□ -1.37
FGFR1-227ENST00000526570 KRTAP13-3Q3SY46 172 aa6.47□□□□□ -1.37
FGFR1-227ENST00000526570 MXRA5Q9NR99 2828 aa6.46□□□□□ -1.38
FGFR1-227ENST00000526570 BSNQ9UPA5 3926 aa6.43□□□□□ -1.38
FGFR1-227ENST00000526570 TENM1Q9UKZ4 2725 aa6.41□□□□□ -1.38
FGFR1-227ENST00000526570 INE1O15225 51 aa6.4□□□□□ -1.38
FGFR1-227ENST00000526570 TENM2Q9NT68 2774 aa6.4□□□□□ -1.39
FGFR1-227ENST00000526570 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
FGFR1-227ENST00000526570 A0A1B0GVY2 172 aa6.38□□□□□ -1.39
FGFR1-227ENST00000526570 CELSR1Q9NYQ6 3014 aa6.37□□□□□ -1.39
FGFR1-227ENST00000526570 XP32Q5T750 250 aa6.37□□□□□ -1.39
FGFR1-227ENST00000526570 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
FGFR1-227ENST00000526570 ANK3Q12955 4377 aaKnown RBP6.35□□□□□ -1.39
FGFR1-227ENST00000526570 OTOGQ6ZRI0 2925 aa6.34□□□□□ -1.39
FGFR1-227ENST00000526570 KRTAP12-2P59991 146 aa6.3□□□□□ -1.4
FGFR1-227ENST00000526570 PKD1L1Q8TDX9 2849 aa6.28□□□□□ -1.4
FGFR1-227ENST00000526570 ZFHX3Q15911 3703 aa6.22□□□□□ -1.41
FGFR1-227ENST00000526570 KRTAP13-4Q3LI77 160 aa6.19□□□□□ -1.42
FGFR1-227ENST00000526570 FBN1P35555 2871 aaKnown RBP6.18□□□□□ -1.42
FGFR1-227ENST00000526570 VWFP04275 2813 aa6.15□□□□□ -1.42
FGFR1-227ENST00000526570 VPS13CQ709C8 3753 aa6.15□□□□□ -1.43
FGFR1-227ENST00000526570 KRTAP12-1P59990 96 aa6.15□□□□□ -1.43
FGFR1-227ENST00000526570 TGP01266 2768 aa6.14□□□□□ -1.43
FGFR1-227ENST00000526570 CSMD2Q7Z408 3487 aa6.11□□□□□ -1.43
FGFR1-227ENST00000526570 CUBNO60494 3623 aa6.11□□□□□ -1.43
FGFR1-227ENST00000526570 KRTAP10-10P60014 251 aa6.04□□□□□ -1.44
FGFR1-227ENST00000526570 KRTAP3-1Q9BYR8 98 aa6.03□□□□□ -1.44
FGFR1-227ENST00000526570 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
FGFR1-227ENST00000526570 TRRAPQ9Y4A5 3859 aa5.99□□□□□ -1.45
FGFR1-227ENST00000526570 SRRM2Q9UQ35 2752 aaKnown RBP5.98□□□□□ -1.45
FGFR1-227ENST00000526570 KRTAP10-6P60371 365 aaPredicted RBP5.95□□□□□ -1.46
FGFR1-227ENST00000526570 HUWE1Q7Z6Z7 4374 aaKnown RBP5.92□□□□□ -1.46
FGFR1-227ENST00000526570 AKAP9Q99996 3911 aa5.85□□□□□ -1.47
FGFR1-227ENST00000526570 FBN3Q75N90 2809 aa5.81□□□□□ -1.48
FGFR1-227ENST00000526570 ZNF469Q96JG9 3925 aaPredicted RBP5.81□□□□□ -1.48
FGFR1-227ENST00000526570 ALMS1Q8TCU4 4167 aa5.79□□□□□ -1.48
FGFR1-227ENST00000526570 MT1HL1P0DM35 61 aa5.77□□□□□ -1.49
FGFR1-227ENST00000526570 KRTAP4-5Q9BYR2 181 aa5.75□□□□□ -1.49
FGFR1-227ENST00000526570 KRTAP3-2Q9BYR7 98 aa5.73□□□□□ -1.49
FGFR1-227ENST00000526570 COL7A1Q02388 2944 aa5.7□□□□□ -1.5
FGFR1-227ENST00000526570 MEGF8Q7Z7M0 2845 aa5.69□□□□□ -1.5
FGFR1-227ENST00000526570 KRTAP10-4P60372 401 aaPredicted RBP5.68□□□□□ -1.5
FGFR1-227ENST00000526570 DNAH9Q9NYC9 4486 aa5.67□□□□□ -1.5
FGFR1-227ENST00000526570 KRTAP3-3Q9BYR6 98 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 456 ms