RNA–Protein interactions for RNA: ENST00000526258.5

KDM2A-207, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 5,671 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-207ENST00000526258 KRTAP13-3Q3SY46 172 aa6.79□□□□□ -1.32
KDM2A-207ENST00000526258 MKI67P46013 3256 aaKnown RBP6.78□□□□□ -1.32
KDM2A-207ENST00000526258 BRCA2P51587 3418 aa6.75□□□□□ -1.33
KDM2A-207ENST00000526258 CELSR3Q9NYQ7 3312 aa6.73□□□□□ -1.33
KDM2A-207ENST00000526258 HIVEP1P15822 2718 aa6.71□□□□□ -1.34
KDM2A-207ENST00000526258 A0A1B0GVY2 172 aa6.68□□□□□ -1.34
KDM2A-207ENST00000526258 REV3LO60673 3130 aa6.67□□□□□ -1.34
KDM2A-207ENST00000526258 KRTAP12-2P59991 146 aa6.66□□□□□ -1.34
KDM2A-207ENST00000526258 XP32Q5T750 250 aa6.65□□□□□ -1.35
KDM2A-207ENST00000526258 COL12A1Q99715 3063 aa6.64□□□□□ -1.35
KDM2A-207ENST00000526258 KRTAP1-4P0C5Y4 121 aa6.63□□□□□ -1.35
KDM2A-207ENST00000526258 XIRP2A4UGR9 3374 aa6.63□□□□□ -1.35
KDM2A-207ENST00000526258 TGP01266 2768 aa6.63□□□□□ -1.35
KDM2A-207ENST00000526258 FRYLO94915 3013 aa6.62□□□□□ -1.35
KDM2A-207ENST00000526258 TACC2O95359 2948 aa6.62□□□□□ -1.35
KDM2A-207ENST00000526258 LAMA3Q16787 3333 aa6.62□□□□□ -1.35
KDM2A-207ENST00000526258 ADGRG4Q8IZF6 3080 aa6.61□□□□□ -1.35
KDM2A-207ENST00000526258 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
KDM2A-207ENST00000526258 ITPR2Q14571 2701 aa6.58□□□□□ -1.36
KDM2A-207ENST00000526258 CELSR2Q9HCU4 2923 aa6.56□□□□□ -1.36
KDM2A-207ENST00000526258 NIPBLQ6KC79 2804 aaeCLIP6.56□□□□□ -1.36
KDM2A-207ENST00000526258 ZZEF1O43149 2961 aa6.55□□□□□ -1.36
KDM2A-207ENST00000526258 KRTAP12-1P59990 96 aa6.54□□□□□ -1.36
KDM2A-207ENST00000526258 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
KDM2A-207ENST00000526258 ATMQ13315 3056 aa6.49□□□□□ -1.37
KDM2A-207ENST00000526258 BOD1L1Q8NFC6 3051 aa6.49□□□□□ -1.37
KDM2A-207ENST00000526258 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
KDM2A-207ENST00000526258 PRO2289Q9P1D8 64 aa6.47□□□□□ -1.37
KDM2A-207ENST00000526258 CDH23Q9H251 3354 aa6.46□□□□□ -1.38
KDM2A-207ENST00000526258 VCANP13611 3396 aa6.45□□□□□ -1.38
KDM2A-207ENST00000526258 DNAH14Q0VDD8 3507 aa6.44□□□□□ -1.38
KDM2A-207ENST00000526258 LAMA1P25391 3075 aa6.42□□□□□ -1.38
KDM2A-207ENST00000526258 CFAP47Q6ZTR5 3102 aa6.42□□□□□ -1.38
KDM2A-207ENST00000526258 INE1O15225 51 aa6.42□□□□□ -1.38
KDM2A-207ENST00000526258 DCHS2Q6V1P9 2916 aa6.41□□□□□ -1.38
KDM2A-207ENST00000526258 TENM3Q9P273 2699 aa6.4□□□□□ -1.39
KDM2A-207ENST00000526258 DMXL1Q9Y485 3027 aa6.4□□□□□ -1.39
KDM2A-207ENST00000526258 FLNCQ14315 2725 aa6.38□□□□□ -1.39
KDM2A-207ENST00000526258 COL6A3P12111 3177 aa6.37□□□□□ -1.39
KDM2A-207ENST00000526258 KRTAP3-1Q9BYR8 98 aa6.37□□□□□ -1.39
KDM2A-207ENST00000526258 CRYBG3Q68DQ2 2970 aa6.33□□□□□ -1.4
KDM2A-207ENST00000526258 NF1P21359 2839 aa6.31□□□□□ -1.4
KDM2A-207ENST00000526258 SZT2Q5T011 3432 aa6.31□□□□□ -1.4
KDM2A-207ENST00000526258 ZANQ9Y493 2812 aa6.31□□□□□ -1.4
KDM2A-207ENST00000526258 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
KDM2A-207ENST00000526258 TNRC18O15417 2968 aaPredicted RBP6.3□□□□□ -1.4
KDM2A-207ENST00000526258 USP34Q70CQ2 3546 aa6.3□□□□□ -1.4
KDM2A-207ENST00000526258 PDZD2O15018 2839 aa6.29□□□□□ -1.4
KDM2A-207ENST00000526258 TENM4Q6N022 2769 aa6.29□□□□□ -1.4
KDM2A-207ENST00000526258 FBN2P35556 2912 aa6.26□□□□□ -1.41
KDM2A-207ENST00000526258 TENM2Q9NT68 2774 aa6.23□□□□□ -1.41
KDM2A-207ENST00000526258 TENM1Q9UKZ4 2725 aa6.22□□□□□ -1.41
KDM2A-207ENST00000526258 SPEGQ15772 3267 aa6.22□□□□□ -1.41
KDM2A-207ENST00000526258 HRNRQ86YZ3 2850 aaPredicted RBP6.15□□□□□ -1.43
KDM2A-207ENST00000526258 SRRM2Q9UQ35 2752 aaKnown RBP6.15□□□□□ -1.43
KDM2A-207ENST00000526258 MYO15AQ9UKN7 3530 aa6.1□□□□□ -1.43
KDM2A-207ENST00000526258 CELSR1Q9NYQ6 3014 aa6.09□□□□□ -1.43
KDM2A-207ENST00000526258 EYSQ5T1H1 3165 aa6.09□□□□□ -1.43
KDM2A-207ENST00000526258 SPTBN5Q9NRC6 3674 aaKnown RBP6.07□□□□□ -1.44
KDM2A-207ENST00000526258 KRTAP21-3Q3LHN1 58 aa6.07□□□□□ -1.44
KDM2A-207ENST00000526258 KRTAP3-2Q9BYR7 98 aa6.04□□□□□ -1.44
KDM2A-207ENST00000526258 MXRA5Q9NR99 2828 aa6□□□□□ -1.45
KDM2A-207ENST00000526258 PKD1L1Q8TDX9 2849 aa5.97□□□□□ -1.45
KDM2A-207ENST00000526258 KRTAP3-3Q9BYR6 98 aa5.93□□□□□ -1.46
KDM2A-207ENST00000526258 LOC400499M0QZD8 3231 aa5.9□□□□□ -1.46
KDM2A-207ENST00000526258 WDFY3Q8IZQ1 3526 aa5.89□□□□□ -1.47
KDM2A-207ENST00000526258 VWFP04275 2813 aa5.85□□□□□ -1.47
KDM2A-207ENST00000526258 DCHS1Q96JQ0 3298 aa5.84□□□□□ -1.47
KDM2A-207ENST00000526258 CRCT1Q9UGL9 99 aa5.83□□□□□ -1.48
KDM2A-207ENST00000526258 ZFHX3Q15911 3703 aa5.83□□□□□ -1.48
KDM2A-207ENST00000526258 MEGF8Q7Z7M0 2845 aa5.8□□□□□ -1.48
KDM2A-207ENST00000526258 FBN3Q75N90 2809 aa5.77□□□□□ -1.49
KDM2A-207ENST00000526258 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
KDM2A-207ENST00000526258 DMDP11532 3685 aa5.75□□□□□ -1.49
KDM2A-207ENST00000526258 KRTAP10-12P60413 245 aa5.75□□□□□ -1.49
KDM2A-207ENST00000526258 CSMD1Q96PZ7 3565 aa5.73□□□□□ -1.49
KDM2A-207ENST00000526258 ZFHX4Q86UP3 3567 aa5.68□□□□□ -1.5
KDM2A-207ENST00000526258 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
KDM2A-207ENST00000526258 MUC3AQ02505 3323 aa5.67□□□□□ -1.5
KDM2A-207ENST00000526258 COL7A1Q02388 2944 aa5.66□□□□□ -1.5
KDM2A-207ENST00000526258 ASPMQ8IZT6 3477 aa5.63□□□□□ -1.51
KDM2A-207ENST00000526258 LCE3AQ5TA76 89 aa5.59□□□□□ -1.51
KDM2A-207ENST00000526258 LAMA5O15230 3695 aa5.56□□□□□ -1.52
KDM2A-207ENST00000526258 RELNP78509 3460 aa5.55□□□□□ -1.52
KDM2A-207ENST00000526258 KRTAP10-5P60370 271 aa5.54□□□□□ -1.52
KDM2A-207ENST00000526258 SMG1Q96Q15 3661 aaKnown RBP5.54□□□□□ -1.52
KDM2A-207ENST00000526258 FBN1P35555 2871 aaKnown RBP5.52□□□□□ -1.53
KDM2A-207ENST00000526258 LORP23490 312 aaPredicted RBP5.46□□□□□ -1.54
KDM2A-207ENST00000526258 OTOGQ6ZRI0 2925 aa5.45□□□□□ -1.54
KDM2A-207ENST00000526258 CUBNO60494 3623 aa5.45□□□□□ -1.54
KDM2A-207ENST00000526258 SPENQ96T58 3664 aaKnown RBP5.44□□□□□ -1.54
KDM2A-207ENST00000526258 SVEP1Q4LDE5 3571 aa5.37□□□□□ -1.55
KDM2A-207ENST00000526258 MT1HL1P0DM35 61 aa5.31□□□□□ -1.56
KDM2A-207ENST00000526258 KRTAP10-4P60372 401 aaPredicted RBP5.19□□□□□ -1.58
KDM2A-207ENST00000526258 BSNQ9UPA5 3926 aa5.18□□□□□ -1.58
KDM2A-207ENST00000526258 ALMS1Q8TCU4 4167 aa5.17□□□□□ -1.58
KDM2A-207ENST00000526258 KRTAP8-1Q8IUC2 63 aa5.11□□□□□ -1.59
KDM2A-207ENST00000526258 NBPF19A0A087WUL8 3843 aa5.08□□□□□ -1.6
KDM2A-207ENST00000526258 TRRAPQ9Y4A5 3859 aa5.08□□□□□ -1.6
KDM2A-207ENST00000526258 VPS13CQ709C8 3753 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms