RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 ATMQ13315 3056 aa7.54□□□□□ -1.2
LRRK1-202ENST00000525284 CHD6Q8TD26 2715 aa7.54□□□□□ -1.2
LRRK1-202ENST00000525284 TNRC18O15417 2968 aaPredicted RBP7.54□□□□□ -1.2
LRRK1-202ENST00000525284 RPS29P62273 56 aaKnown RBP7.54□□□□□ -1.2
LRRK1-202ENST00000525284 TACC2O95359 2948 aa7.53□□□□□ -1.2
LRRK1-202ENST00000525284 DCHS1Q96JQ0 3298 aa7.53□□□□□ -1.2
LRRK1-202ENST00000525284 DMXL1Q9Y485 3027 aa7.48□□□□□ -1.21
LRRK1-202ENST00000525284 DMDP11532 3685 aa7.48□□□□□ -1.21
LRRK1-202ENST00000525284 KRTAP13-2Q52LG2 175 aa7.47□□□□□ -1.21
LRRK1-202ENST00000525284 GCN1Q92616 2671 aaKnown RBP7.46□□□□□ -1.22
LRRK1-202ENST00000525284 TEX15Q9BXT5 2789 aa7.44□□□□□ -1.22
LRRK1-202ENST00000525284 NBEAL2Q6ZNJ1 2754 aa7.44□□□□□ -1.22
LRRK1-202ENST00000525284 Q6ZRN7 208 aaPredicted RBP7.44□□□□□ -1.22
LRRK1-202ENST00000525284 FLNBO75369 2602 aaKnown RBP7.43□□□□□ -1.22
LRRK1-202ENST00000525284 COL12A1Q99715 3063 aa7.41□□□□□ -1.22
LRRK1-202ENST00000525284 CSMD1Q96PZ7 3565 aa7.4□□□□□ -1.22
LRRK1-202ENST00000525284 HELZ2Q9BYK8 2649 aaKnown RBP7.38□□□□□ -1.23
LRRK1-202ENST00000525284 LAMA5O15230 3695 aa7.36□□□□□ -1.23
LRRK1-202ENST00000525284 H0YAA0 97 aa7.35□□□□□ -1.23
LRRK1-202ENST00000525284 KRTAP7-1Q8IUC3 87 aa7.35□□□□□ -1.23
LRRK1-202ENST00000525284 RELNP78509 3460 aa7.34□□□□□ -1.23
LRRK1-202ENST00000525284 IGSF10Q6WRI0 2623 aa7.34□□□□□ -1.23
LRRK1-202ENST00000525284 SMG1Q96Q15 3661 aaKnown RBP7.33□□□□□ -1.24
LRRK1-202ENST00000525284 KRTAP10-10P60014 251 aa7.29□□□□□ -1.24
LRRK1-202ENST00000525284 SETXQ7Z333 2677 aaKnown RBP7.28□□□□□ -1.24
LRRK1-202ENST00000525284 UNC79Q9P2D8 2635 aa7.28□□□□□ -1.24
LRRK1-202ENST00000525284 KRTAP13-1Q8IUC0 172 aa7.27□□□□□ -1.25
LRRK1-202ENST00000525284 HRNRQ86YZ3 2850 aaPredicted RBP7.27□□□□□ -1.25
LRRK1-202ENST00000525284 ITPR1Q14643 2758 aa7.26□□□□□ -1.25
LRRK1-202ENST00000525284 UTP20O75691 2785 aaKnown RBP7.26□□□□□ -1.25
LRRK1-202ENST00000525284 ASH1LQ9NR48 2969 aaKnown RBP7.26□□□□□ -1.25
LRRK1-202ENST00000525284 PRO2289Q9P1D8 64 aa7.22□□□□□ -1.25
LRRK1-202ENST00000525284 NOTCH1P46531 2555 aa7.2□□□□□ -1.26
LRRK1-202ENST00000525284 TEP1Q99973 2627 aaKnown RBP7.17□□□□□ -1.26
LRRK1-202ENST00000525284 FLNCQ14315 2725 aa7.16□□□□□ -1.26
LRRK1-202ENST00000525284 XP32Q5T750 250 aa7.14□□□□□ -1.27
LRRK1-202ENST00000525284 MUC3AQ02505 3323 aa7.14□□□□□ -1.27
LRRK1-202ENST00000525284 SVEP1Q4LDE5 3571 aa7.14□□□□□ -1.27
LRRK1-202ENST00000525284 CRYBG3Q68DQ2 2970 aa7.11□□□□□ -1.27
LRRK1-202ENST00000525284 UBR5O95071 2799 aaPredicted RBP7.1□□□□□ -1.27
LRRK1-202ENST00000525284 ZANQ9Y493 2812 aa7.08□□□□□ -1.28
LRRK1-202ENST00000525284 APCP25054 2843 aa7.07□□□□□ -1.28
LRRK1-202ENST00000525284 ITPR2Q14571 2701 aa7.07□□□□□ -1.28
LRRK1-202ENST00000525284 KRTAP12-2P59991 146 aa7.04□□□□□ -1.28
LRRK1-202ENST00000525284 HIVEP1P15822 2718 aa7.04□□□□□ -1.28
LRRK1-202ENST00000525284 COL6A5A8TX70 2615 aa7.03□□□□□ -1.28
LRRK1-202ENST00000525284 FBN2P35556 2912 aa7.02□□□□□ -1.29
LRRK1-202ENST00000525284 BAHCC1Q9P281 2608 aa7.01□□□□□ -1.29
LRRK1-202ENST00000525284 DCHS2Q6V1P9 2916 aa7□□□□□ -1.29
LRRK1-202ENST00000525284 CELSR2Q9HCU4 2923 aa6.98□□□□□ -1.29
LRRK1-202ENST00000525284 SPENQ96T58 3664 aaKnown RBP6.97□□□□□ -1.29
LRRK1-202ENST00000525284 NSD1Q96L73 2696 aaPredicted RBP6.95□□□□□ -1.3
LRRK1-202ENST00000525284 CELSR1Q9NYQ6 3014 aa6.93□□□□□ -1.3
LRRK1-202ENST00000525284 BSNQ9UPA5 3926 aa6.91□□□□□ -1.3
LRRK1-202ENST00000525284 NBPF19A0A087WUL8 3843 aa6.9□□□□□ -1.3
LRRK1-202ENST00000525284 KRTAP1-4P0C5Y4 121 aa6.9□□□□□ -1.3
LRRK1-202ENST00000525284 KMT2BQ9UMN6 2715 aaPredicted RBP6.89□□□□□ -1.31
LRRK1-202ENST00000525284 CUBNO60494 3623 aa6.87□□□□□ -1.31
LRRK1-202ENST00000525284 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
LRRK1-202ENST00000525284 CRCT1Q9UGL9 99 aa6.84□□□□□ -1.31
LRRK1-202ENST00000525284 NF1P21359 2839 aa6.84□□□□□ -1.31
LRRK1-202ENST00000525284 KRTAP13-4Q3LI77 160 aa6.83□□□□□ -1.32
LRRK1-202ENST00000525284 KRTAP15-1Q3LI76 137 aa6.83□□□□□ -1.32
LRRK1-202ENST00000525284 MXRA5Q9NR99 2828 aa6.78□□□□□ -1.32
LRRK1-202ENST00000525284 KRTAP13-3Q3SY46 172 aa6.74□□□□□ -1.33
LRRK1-202ENST00000525284 ZFHX3Q15911 3703 aa6.73□□□□□ -1.33
LRRK1-202ENST00000525284 KRTAP21-3Q3LHN1 58 aa6.73□□□□□ -1.33
LRRK1-202ENST00000525284 CSMD2Q7Z408 3487 aa6.72□□□□□ -1.33
LRRK1-202ENST00000525284 NIPBLQ6KC79 2804 aaeCLIP6.7□□□□□ -1.34
LRRK1-202ENST00000525284 KRTAP12-1P59990 96 aa6.69□□□□□ -1.34
LRRK1-202ENST00000525284 VPS13CQ709C8 3753 aa6.65□□□□□ -1.34
LRRK1-202ENST00000525284 INE1O15225 51 aa6.64□□□□□ -1.35
LRRK1-202ENST00000525284 ANK3Q12955 4377 aaKnown RBP6.61□□□□□ -1.35
LRRK1-202ENST00000525284 TENM3Q9P273 2699 aa6.52□□□□□ -1.37
LRRK1-202ENST00000525284 TENM4Q6N022 2769 aa6.51□□□□□ -1.37
LRRK1-202ENST00000525284 PDZD2O15018 2839 aa6.51□□□□□ -1.37
LRRK1-202ENST00000525284 TRRAPQ9Y4A5 3859 aa6.44□□□□□ -1.38
LRRK1-202ENST00000525284 TENM1Q9UKZ4 2725 aa6.42□□□□□ -1.38
LRRK1-202ENST00000525284 VWFP04275 2813 aa6.36□□□□□ -1.39
LRRK1-202ENST00000525284 TGP01266 2768 aa6.36□□□□□ -1.39
LRRK1-202ENST00000525284 KRTAP3-1Q9BYR8 98 aa6.33□□□□□ -1.4
LRRK1-202ENST00000525284 AKAP9Q99996 3911 aa6.33□□□□□ -1.4
LRRK1-202ENST00000525284 ZNF469Q96JG9 3925 aaPredicted RBP6.3□□□□□ -1.4
LRRK1-202ENST00000525284 FBN1P35555 2871 aaKnown RBP6.29□□□□□ -1.4
LRRK1-202ENST00000525284 TENM2Q9NT68 2774 aa6.29□□□□□ -1.4
LRRK1-202ENST00000525284 OTOGQ6ZRI0 2925 aa6.29□□□□□ -1.4
LRRK1-202ENST00000525284 PKD1L1Q8TDX9 2849 aa6.26□□□□□ -1.41
LRRK1-202ENST00000525284 KRTAP10-6P60371 365 aaPredicted RBP6.24□□□□□ -1.41
LRRK1-202ENST00000525284 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
LRRK1-202ENST00000525284 HUWE1Q7Z6Z7 4374 aaKnown RBP6.22□□□□□ -1.41
LRRK1-202ENST00000525284 CSMD3Q7Z407 3707 aa6.18□□□□□ -1.42
LRRK1-202ENST00000525284 KRTAP10-5P60370 271 aa6.14□□□□□ -1.43
LRRK1-202ENST00000525284 KRTAP12-3P60328 96 aa6.09□□□□□ -1.43
LRRK1-202ENST00000525284 SRRM2Q9UQ35 2752 aaKnown RBP6.03□□□□□ -1.44
LRRK1-202ENST00000525284 FBN3Q75N90 2809 aa6.02□□□□□ -1.45
LRRK1-202ENST00000525284 LCE3AQ5TA76 89 aa5.99□□□□□ -1.45
LRRK1-202ENST00000525284 LORP23490 312 aaPredicted RBP5.96□□□□□ -1.46
LRRK1-202ENST00000525284 MEGF8Q7Z7M0 2845 aa5.92□□□□□ -1.46
LRRK1-202ENST00000525284 KRTAP3-2Q9BYR7 98 aa5.92□□□□□ -1.46
LRRK1-202ENST00000525284 DNAH10Q8IVF4 4471 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms