RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 C20orf197Q8N268 126 aa5.77□□□□□ -1.49
VPS13B-212ENST00000524330 DYNC1H1Q14204 4646 aaKnown RBP5.76□□□□□ -1.49
VPS13B-212ENST00000524330 H3BPC8 53 aa5.76□□□□□ -1.49
VPS13B-212ENST00000524330 C1orf195Q5TG92 126 aa5.76□□□□□ -1.49
VPS13B-212ENST00000524330 SRRM2Q9UQ35 2752 aaKnown RBP5.75□□□□□ -1.49
VPS13B-212ENST00000524330 KLKP1Q107X0 134 aa5.75□□□□□ -1.49
VPS13B-212ENST00000524330 MRPL34Q9BQ48 92 aaKnown RBP5.75□□□□□ -1.49
VPS13B-212ENST00000524330 LRP1BQ9NZR2 4599 aa5.75□□□□□ -1.49
VPS13B-212ENST00000524330 NDUFS5O43920 106 aa5.74□□□□□ -1.49
VPS13B-212ENST00000524330 LINC00313P59037 77 aa5.74□□□□□ -1.49
VPS13B-212ENST00000524330 TMEM258P61165 79 aa5.73□□□□□ -1.49
VPS13B-212ENST00000524330 Q8N1X5 172 aa5.71□□□□□ -1.5
VPS13B-212ENST00000524330 H0Y9P7 68 aa5.7□□□□□ -1.5
VPS13B-212ENST00000524330 TRAV22A0A0B4J277 110 aa5.69□□□□□ -1.5
VPS13B-212ENST00000524330 A0A0U1RQV1 116 aa5.69□□□□□ -1.5
VPS13B-212ENST00000524330 ATP5EP56381 51 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-212ENST00000524330 SNURFQ9Y675 71 aa5.69□□□□□ -1.5
VPS13B-212ENST00000524330 VPS13BQ7Z7G8 4022 aa5.68□□□□□ -1.5
VPS13B-212ENST00000524330 KMT2CQ8NEZ4 4911 aaKnown RBP5.67□□□□□ -1.5
VPS13B-212ENST00000524330 PKHD1P08F94 4074 aa5.67□□□□□ -1.5
VPS13B-212ENST00000524330 LINC00208Q96KT6 92 aa5.66□□□□□ -1.5
VPS13B-212ENST00000524330 APOBP04114 4563 aaKnown RBP5.66□□□□□ -1.5
VPS13B-212ENST00000524330 FAM236DA0A1B0GTK5 79 aa5.64□□□□□ -1.51
VPS13B-212ENST00000524330 FAM236CP0DP71 79 aa5.64□□□□□ -1.51
VPS13B-212ENST00000524330 KRTAP10-8P60410 259 aa5.64□□□□□ -1.51
VPS13B-212ENST00000524330 C1orf64Q8NEQ6 169 aa5.64□□□□□ -1.51
VPS13B-212ENST00000524330 H7BZZ5 65 aa5.63□□□□□ -1.51
VPS13B-212ENST00000524330 OXTP01178 125 aa5.63□□□□□ -1.51
VPS13B-212ENST00000524330 Q8N9P0 234 aaPredicted RBP5.63□□□□□ -1.51
VPS13B-212ENST00000524330 FP248Q71RG6 208 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-212ENST00000524330 NOTCH2NLQ7Z3S9 236 aa5.62□□□□□ -1.51
VPS13B-212ENST00000524330 LOC101927531A0A1B0GV80 90 aa5.61□□□□□ -1.51
VPS13B-212ENST00000524330 ZCCHC13Q8WW36 166 aaKnown RBP5.61□□□□□ -1.51
VPS13B-212ENST00000524330 CYSTM1Q9H1C7 97 aa5.58□□□□□ -1.52
VPS13B-212ENST00000524330 PKHD1L1Q86WI1 4243 aa5.58□□□□□ -1.52
VPS13B-212ENST00000524330 KRTAP16-1A8MUX0 517 aa5.57□□□□□ -1.52
VPS13B-212ENST00000524330 SPANXA2-OT1Q8N9U9 137 aa5.57□□□□□ -1.52
VPS13B-212ENST00000524330 RPS28P62857 69 aaKnown RBP5.56□□□□□ -1.52
VPS13B-212ENST00000524330 RYR3Q15413 4870 aa5.55□□□□□ -1.52
VPS13B-212ENST00000524330 SERP1Q9Y6X1 66 aa5.55□□□□□ -1.52
VPS13B-212ENST00000524330 RYR1P21817 5038 aa5.54□□□□□ -1.52
VPS13B-212ENST00000524330 RETNLBQ9BQ08 111 aa5.53□□□□□ -1.52
VPS13B-212ENST00000524330 C9orf92A6NGG3 77 aa5.52□□□□□ -1.53
VPS13B-212ENST00000524330 C20orf166-AS1Q96NR2 134 aa5.52□□□□□ -1.53
VPS13B-212ENST00000524330 FAT1Q14517 4588 aa5.52□□□□□ -1.53
VPS13B-212ENST00000524330 IGLV7-46A0A075B6I9 117 aa5.51□□□□□ -1.53
VPS13B-212ENST00000524330 Q5W150 140 aa5.51□□□□□ -1.53
VPS13B-212ENST00000524330 CYP4F30PQ9H0H9 118 aa5.51□□□□□ -1.53
VPS13B-212ENST00000524330 A8MUU9 505 aa5.5□□□□□ -1.53
VPS13B-212ENST00000524330 PCOTHQ58A44 107 aa5.5□□□□□ -1.53
VPS13B-212ENST00000524330 HSPG2P98160 4391 aa5.49□□□□□ -1.53
VPS13B-212ENST00000524330 IGKV2-30P06310 120 aa5.49□□□□□ -1.53
VPS13B-212ENST00000524330 KRTAP13-3Q3SY46 172 aa5.49□□□□□ -1.53
VPS13B-212ENST00000524330 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
VPS13B-212ENST00000524330 C7orf65Q6ZTY9 151 aa5.48□□□□□ -1.53
VPS13B-212ENST00000524330 Q75L30 129 aa5.48□□□□□ -1.53
VPS13B-212ENST00000524330 J3QL48 77 aa5.47□□□□□ -1.53
VPS13B-212ENST00000524330 PRR4Q16378 134 aa5.46□□□□□ -1.54
VPS13B-212ENST00000524330 ATP11AUNQ6ZP68 121 aa5.46□□□□□ -1.54
VPS13B-212ENST00000524330 FLG2Q5D862 2391 aaPredicted RBP5.46□□□□□ -1.54
VPS13B-212ENST00000524330 IGKV2D-30A0A075B6S6 120 aa5.45□□□□□ -1.54
VPS13B-212ENST00000524330 SMIM26A0A096LP01 95 aa5.43□□□□□ -1.54
VPS13B-212ENST00000524330 KRTAP17-1Q9BYP8 105 aa5.43□□□□□ -1.54
VPS13B-212ENST00000524330 ACYP2P14621 99 aa5.41□□□□□ -1.54
VPS13B-212ENST00000524330 HRES1P13985 223 aa5.4□□□□□ -1.54
VPS13B-212ENST00000524330 RPL37P61927 97 aaKnown RBP5.4□□□□□ -1.54
VPS13B-212ENST00000524330 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
VPS13B-212ENST00000524330 KIAA1109Q2LD37 5005 aa5.38□□□□□ -1.55
VPS13B-212ENST00000524330 DMBT1Q9UGM3 2413 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-212ENST00000524330 A8MUN3 132 aa5.37□□□□□ -1.55
VPS13B-212ENST00000524330 XP32Q5T750 250 aa5.37□□□□□ -1.55
VPS13B-212ENST00000524330 KRTAP4-5Q9BYR2 181 aa5.37□□□□□ -1.55
VPS13B-212ENST00000524330 V9GYY9 64 aa5.37□□□□□ -1.55
VPS13B-212ENST00000524330 CHKB-CPT1BH3BT56 60 aa5.36□□□□□ -1.55
VPS13B-212ENST00000524330 COA5Q86WW8 74 aa5.36□□□□□ -1.55
VPS13B-212ENST00000524330 DMAC1Q96GE9 116 aa5.36□□□□□ -1.55
VPS13B-212ENST00000524330 FAT3Q8TDW7 4589 aa5.35□□□□□ -1.55
VPS13B-212ENST00000524330 EPPK1P58107 5090 aaKnown RBP5.35□□□□□ -1.55
VPS13B-212ENST00000524330 TNXBP22105 4242 aa5.34□□□□□ -1.55
VPS13B-212ENST00000524330 SPINK7P58062 85 aa5.34□□□□□ -1.55
VPS13B-212ENST00000524330 SPTSSBQ8NFR3 76 aa5.3□□□□□ -1.56
VPS13B-212ENST00000524330 LRP1Q07954 4544 aaKnown RBP5.3□□□□□ -1.56
VPS13B-212ENST00000524330 BIRC6Q9NR09 4857 aa5.3□□□□□ -1.56
VPS13B-212ENST00000524330 SEC61BP60468 96 aaKnown RBP5.28□□□□□ -1.56
VPS13B-212ENST00000524330 Q1T7F1 81 aa5.27□□□□□ -1.57
VPS13B-212ENST00000524330 C4orf26Q17RF5 130 aa5.26□□□□□ -1.57
VPS13B-212ENST00000524330 MPLKIPQ8TAP9 179 aa5.26□□□□□ -1.57
VPS13B-212ENST00000524330 COX6B2Q6YFQ2 88 aa5.25□□□□□ -1.57
VPS13B-212ENST00000524330 PRR15LQ9BU68 103 aa5.21□□□□□ -1.58
VPS13B-212ENST00000524330 RBM12B-AS1Q9P1G2 102 aa5.21□□□□□ -1.58
VPS13B-212ENST00000524330 HERC2O95714 4834 aa5.21□□□□□ -1.58
VPS13B-212ENST00000524330 LINC01558Q9Y6Z2 57 aa5.19□□□□□ -1.58
VPS13B-212ENST00000524330 MYCBP2O75592 4640 aa5.18□□□□□ -1.58
VPS13B-212ENST00000524330 SEC61GP60059 68 aa5.17□□□□□ -1.58
VPS13B-212ENST00000524330 A0A1B0GU69 56 aa5.13□□□□□ -1.59
VPS13B-212ENST00000524330 PSPHP1O15172 72 aa5.13□□□□□ -1.59
VPS13B-212ENST00000524330 H1FX-AS1Q4G0G2 97 aa5.11□□□□□ -1.59
VPS13B-212ENST00000524330 KRTAP3-1Q9BYR8 98 aa5.11□□□□□ -1.59
VPS13B-212ENST00000524330 ABCA13Q86UQ4 5058 aa5.11□□□□□ -1.59
VPS13B-212ENST00000524330 S4R3F8 94 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms