RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 RBM12B-AS1Q9P1G2 102 aa5.89□□□□□ -1.47
CTNNA1-237ENST00000523275 HRES1P13985 223 aa5.88□□□□□ -1.47
CTNNA1-237ENST00000523275 UBE2V1Q13404 147 aa5.88□□□□□ -1.47
CTNNA1-237ENST00000523275 MPLKIPQ8TAP9 179 aa5.88□□□□□ -1.47
CTNNA1-237ENST00000523275 MT2AP02795 61 aa5.87□□□□□ -1.47
CTNNA1-237ENST00000523275 PYY3Q5JQD4 70 aa5.85□□□□□ -1.47
CTNNA1-237ENST00000523275 VPS25Q9BRG1 176 aa5.85□□□□□ -1.47
CTNNA1-237ENST00000523275 A0A1B0GVX0 72 aa5.84□□□□□ -1.47
CTNNA1-237ENST00000523275 C8orf87E5RJ46 101 aa5.84□□□□□ -1.47
CTNNA1-237ENST00000523275 RBM3P98179 157 aaKnown RBP5.84□□□□□ -1.47
CTNNA1-237ENST00000523275 SCGB1C2P0DMR2 95 aa5.83□□□□□ -1.48
CTNNA1-237ENST00000523275 DSCR8Q96T75 97 aa5.83□□□□□ -1.48
CTNNA1-237ENST00000523275 USH2AO75445 5202 aa5.83□□□□□ -1.48
CTNNA1-237ENST00000523275 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
CTNNA1-237ENST00000523275 UQCR10Q9UDW1 63 aa5.82□□□□□ -1.48
CTNNA1-237ENST00000523275 MT1FP04733 61 aa5.81□□□□□ -1.48
CTNNA1-237ENST00000523275 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
CTNNA1-237ENST00000523275 SSPOA2VEC9 5147 aa5.8□□□□□ -1.48
CTNNA1-237ENST00000523275 J3KT08 172 aa5.8□□□□□ -1.48
CTNNA1-237ENST00000523275 BAALC-AS2P0C853 105 aa5.8□□□□□ -1.48
CTNNA1-237ENST00000523275 C21orf62-AS1Q17RA5 79 aa5.8□□□□□ -1.48
CTNNA1-237ENST00000523275 MTURNQ8N3F0 131 aa5.8□□□□□ -1.48
CTNNA1-237ENST00000523275 ZCCHC13Q8WW36 166 aaKnown RBP5.8□□□□□ -1.48
CTNNA1-237ENST00000523275 KRTAP9-7A8MTY7 169 aa5.79□□□□□ -1.48
CTNNA1-237ENST00000523275 C9JAW5 83 aa5.79□□□□□ -1.48
CTNNA1-237ENST00000523275 KRTAP9-3Q9BYQ3 159 aa5.79□□□□□ -1.48
CTNNA1-237ENST00000523275 SPINK7P58062 85 aa5.78□□□□□ -1.48
CTNNA1-237ENST00000523275 Q6ZQT0 140 aa5.77□□□□□ -1.49
CTNNA1-237ENST00000523275 NDUFB1O75438 58 aa5.76□□□□□ -1.49
CTNNA1-237ENST00000523275 Q8N9P0 234 aaPredicted RBP5.74□□□□□ -1.49
CTNNA1-237ENST00000523275 KRTAP9-9Q9BYP9 154 aa5.73□□□□□ -1.49
CTNNA1-237ENST00000523275 KRTAP9-4Q9BYQ2 154 aa5.73□□□□□ -1.49
CTNNA1-237ENST00000523275 LOC105371267A0A1B0GV96 52 aa5.72□□□□□ -1.49
CTNNA1-237ENST00000523275 LYRM7Q5U5X0 104 aa5.72□□□□□ -1.49
CTNNA1-237ENST00000523275 A0A1B0GW54 56 aa5.71□□□□□ -1.5
CTNNA1-237ENST00000523275 A8MWP4 228 aa5.71□□□□□ -1.5
CTNNA1-237ENST00000523275 JMJD7-PLA2G4BH0Y9G9 81 aa5.71□□□□□ -1.5
CTNNA1-237ENST00000523275 C8orf17Q9NRJ1 99 aa5.71□□□□□ -1.5
CTNNA1-237ENST00000523275 FCGBPQ9Y6R7 5405 aaPredicted RBP5.71□□□□□ -1.5
CTNNA1-237ENST00000523275 LOC110117498A0A087WWA1 95 aa5.7□□□□□ -1.5
CTNNA1-237ENST00000523275 IGKV3D-7A0A0C4DH55 119 aa5.69□□□□□ -1.5
CTNNA1-237ENST00000523275 PDE6GP18545 87 aa5.69□□□□□ -1.5
CTNNA1-237ENST00000523275 ATXN8Q156A1 80 aa5.69□□□□□ -1.5
CTNNA1-237ENST00000523275 WFDC13Q8IUB5 93 aa5.69□□□□□ -1.5
CTNNA1-237ENST00000523275 Q6ZVQ6 151 aa5.67□□□□□ -1.5
CTNNA1-237ENST00000523275 M0R143 59 aa5.66□□□□□ -1.5
CTNNA1-237ENST00000523275 NAA38Q9BRA0 125 aaKnown RBP5.66□□□□□ -1.5
CTNNA1-237ENST00000523275 PRR15Q8IV56 129 aa5.65□□□□□ -1.5
CTNNA1-237ENST00000523275 C14orf132Q9NPU4 83 aa5.65□□□□□ -1.5
CTNNA1-237ENST00000523275 NREPQ16612 68 aa5.64□□□□□ -1.51
CTNNA1-237ENST00000523275 LINC00846Q9NV44 126 aa5.64□□□□□ -1.51
CTNNA1-237ENST00000523275 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
CTNNA1-237ENST00000523275 TMEM254Q8TBM7 123 aa5.61□□□□□ -1.51
CTNNA1-237ENST00000523275 MRPL34Q9BQ48 92 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-237ENST00000523275 MMP24-AS1A0A0U1RRL7 71 aa5.6□□□□□ -1.51
CTNNA1-237ENST00000523275 KRTAP19-6Q3LI70 58 aa5.6□□□□□ -1.51
CTNNA1-237ENST00000523275 H1FX-AS1Q4G0G2 97 aa5.59□□□□□ -1.51
CTNNA1-237ENST00000523275 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
CTNNA1-237ENST00000523275 hDV103S1A0JD37 113 aa5.57□□□□□ -1.52
CTNNA1-237ENST00000523275 NDUFS5O43920 106 aa5.57□□□□□ -1.52
CTNNA1-237ENST00000523275 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
CTNNA1-237ENST00000523275 K7EQZ3 153 aa5.55□□□□□ -1.52
CTNNA1-237ENST00000523275 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-237ENST00000523275 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
CTNNA1-237ENST00000523275 IGKV2-30P06310 120 aa5.53□□□□□ -1.52
CTNNA1-237ENST00000523275 Q5W150 140 aa5.52□□□□□ -1.53
CTNNA1-237ENST00000523275 SYNE2Q8WXH0 6885 aaKnown RBP5.51□□□□□ -1.53
CTNNA1-237ENST00000523275 H3BT86 120 aa5.51□□□□□ -1.53
CTNNA1-237ENST00000523275 BPY2O14599 106 aa5.51□□□□□ -1.53
CTNNA1-237ENST00000523275 BATFQ16520 125 aa5.51□□□□□ -1.53
CTNNA1-237ENST00000523275 SMIM6P0DI80 62 aa5.5□□□□□ -1.53
CTNNA1-237ENST00000523275 C7orf65Q6ZTY9 151 aa5.5□□□□□ -1.53
CTNNA1-237ENST00000523275 C9orf118A6NHY6 69 aa5.48□□□□□ -1.53
CTNNA1-237ENST00000523275 TSTD3H0UI37 97 aa5.47□□□□□ -1.53
CTNNA1-237ENST00000523275 CASC2Q6XLA1 102 aa5.47□□□□□ -1.53
CTNNA1-237ENST00000523275 A0A1W2PPM0 123 aa5.46□□□□□ -1.54
CTNNA1-237ENST00000523275 Q8N9L7 120 aa5.46□□□□□ -1.54
CTNNA1-237ENST00000523275 HCG22E2RYF7 251 aa5.45□□□□□ -1.54
CTNNA1-237ENST00000523275 C4orf26Q17RF5 130 aa5.45□□□□□ -1.54
CTNNA1-237ENST00000523275 LCE1DQ5T752 114 aa5.45□□□□□ -1.54
CTNNA1-237ENST00000523275 TAX1BP3O14907 124 aa5.44□□□□□ -1.54
CTNNA1-237ENST00000523275 CXCL6P80162 114 aa5.43□□□□□ -1.54
CTNNA1-237ENST00000523275 KRTAP6-3Q3LI67 103 aa5.42□□□□□ -1.54
CTNNA1-237ENST00000523275 C5orf47Q569G3 176 aa5.39□□□□□ -1.55
CTNNA1-237ENST00000523275 PCP4L1A6NKN8 68 aa5.38□□□□□ -1.55
CTNNA1-237ENST00000523275 KRTAP3-1Q9BYR8 98 aa5.37□□□□□ -1.55
CTNNA1-237ENST00000523275 SPCS1Q9Y6A9 102 aa5.37□□□□□ -1.55
CTNNA1-237ENST00000523275 FAM236AA0A1B0GUQ0 79 aa5.36□□□□□ -1.55
CTNNA1-237ENST00000523275 FAM236BA0A1B0GV22 79 aa5.36□□□□□ -1.55
CTNNA1-237ENST00000523275 CSAG1Q6PB30 78 aa5.35□□□□□ -1.55
CTNNA1-237ENST00000523275 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
CTNNA1-237ENST00000523275 UBL5Q9BZL1 73 aa5.35□□□□□ -1.55
CTNNA1-237ENST00000523275 C1orf64Q8NEQ6 169 aa5.34□□□□□ -1.55
CTNNA1-237ENST00000523275 S4R3F8 94 aa5.34□□□□□ -1.55
CTNNA1-237ENST00000523275 A6NN06 94 aa5.31□□□□□ -1.56
CTNNA1-237ENST00000523275 MT1BP07438 61 aa5.3□□□□□ -1.56
CTNNA1-237ENST00000523275 Q5VV11 94 aa5.3□□□□□ -1.56
CTNNA1-237ENST00000523275 LCA10Q71F78 164 aa5.3□□□□□ -1.56
CTNNA1-237ENST00000523275 SPRR2GQ9BYE4 73 aa5.29□□□□□ -1.56
CTNNA1-237ENST00000523275 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 649.5 ms