RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 SMIM29Q86T20 159 aa7.34□□□□□ -1.23
PABPC1-219ENST00000522387 Q8NBF4 154 aa7.34□□□□□ -1.23
PABPC1-219ENST00000522387 ZNF706Q9Y5V0 76 aaPredicted RBP7.34□□□□□ -1.23
PABPC1-219ENST00000522387 TNXBP22105 4242 aa7.33□□□□□ -1.24
PABPC1-219ENST00000522387 MOBPQ13875 183 aa7.32□□□□□ -1.24
PABPC1-219ENST00000522387 KRTAP13-2Q52LG2 175 aa7.31□□□□□ -1.24
PABPC1-219ENST00000522387 LINC00483Q53H64 154 aa7.3□□□□□ -1.24
PABPC1-219ENST00000522387 DMBT1Q9UGM3 2413 aaPredicted RBP7.3□□□□□ -1.24
PABPC1-219ENST00000522387 DSCR10P59022 87 aa7.29□□□□□ -1.24
PABPC1-219ENST00000522387 FAM229BQ4G0N7 80 aa7.29□□□□□ -1.24
PABPC1-219ENST00000522387 TYMSOSQ8TAI1 123 aa7.28□□□□□ -1.24
PABPC1-219ENST00000522387 K7EQZ3 153 aa7.27□□□□□ -1.25
PABPC1-219ENST00000522387 SPRR1BP22528 89 aa7.27□□□□□ -1.25
PABPC1-219ENST00000522387 IGFL1Q6UW32 110 aa7.26□□□□□ -1.25
PABPC1-219ENST00000522387 DEFB116Q30KQ4 102 aa7.25□□□□□ -1.25
PABPC1-219ENST00000522387 PRO0628Q9UI54 55 aa7.25□□□□□ -1.25
PABPC1-219ENST00000522387 MPLKIPQ8TAP9 179 aa7.24□□□□□ -1.25
PABPC1-219ENST00000522387 HERC1Q15751 4861 aa7.22□□□□□ -1.25
PABPC1-219ENST00000522387 HCG22E2RYF7 251 aa7.22□□□□□ -1.25
PABPC1-219ENST00000522387 ZCCHC13Q8WW36 166 aaKnown RBP7.22□□□□□ -1.25
PABPC1-219ENST00000522387 A0A087WSZ3 146 aa7.2□□□□□ -1.26
PABPC1-219ENST00000522387 J3QL48 77 aa7.2□□□□□ -1.26
PABPC1-219ENST00000522387 MT1HL1P0DM35 61 aa7.2□□□□□ -1.26
PABPC1-219ENST00000522387 hDV103S1A0JD37 113 aa7.19□□□□□ -1.26
PABPC1-219ENST00000522387 KRTAP10-8P60410 259 aa7.19□□□□□ -1.26
PABPC1-219ENST00000522387 IGLV8-61A0A075B6I0 122 aa7.17□□□□□ -1.26
PABPC1-219ENST00000522387 WFDC13Q8IUB5 93 aa7.17□□□□□ -1.26
PABPC1-219ENST00000522387 LINC00304Q8N9R0 145 aa7.17□□□□□ -1.26
PABPC1-219ENST00000522387 BRK1Q8WUW1 75 aa7.17□□□□□ -1.26
PABPC1-219ENST00000522387 SSBP3-AS1Q7Z2R9 100 aa7.16□□□□□ -1.26
PABPC1-219ENST00000522387 C1orf64Q8NEQ6 169 aa7.16□□□□□ -1.26
PABPC1-219ENST00000522387 KRTAP3-3Q9BYR6 98 aa7.16□□□□□ -1.26
PABPC1-219ENST00000522387 KRTAP3-2Q9BYR7 98 aa7.16□□□□□ -1.26
PABPC1-219ENST00000522387 C4orf48Q5BLP8 95 aa7.16□□□□□ -1.26
PABPC1-219ENST00000522387 KRTAP29-1A8MX34 341 aaPredicted RBP7.15□□□□□ -1.26
PABPC1-219ENST00000522387 PRR4Q16378 134 aa7.13□□□□□ -1.27
PABPC1-219ENST00000522387 RETNLBQ9BQ08 111 aa7.12□□□□□ -1.27
PABPC1-219ENST00000522387 MP68P56378 58 aa7.12□□□□□ -1.27
PABPC1-219ENST00000522387 CYP4F30PQ9H0H9 118 aa7.12□□□□□ -1.27
PABPC1-219ENST00000522387 NDUFB1O75438 58 aa7.11□□□□□ -1.27
PABPC1-219ENST00000522387 TRAV22A0A0B4J277 110 aa7.09□□□□□ -1.27
PABPC1-219ENST00000522387 Q1T7F1 81 aa7.09□□□□□ -1.27
PABPC1-219ENST00000522387 LINC00208Q96KT6 92 aa7.09□□□□□ -1.27
PABPC1-219ENST00000522387 CASC2Q6XLA1 102 aa7.09□□□□□ -1.28
PABPC1-219ENST00000522387 PRR15Q8IV56 129 aa7.09□□□□□ -1.28
PABPC1-219ENST00000522387 SPINK1P00995 79 aa7.07□□□□□ -1.28
PABPC1-219ENST00000522387 H0Y9P7 68 aa7.06□□□□□ -1.28
PABPC1-219ENST00000522387 A8MWP4 228 aa7.06□□□□□ -1.28
PABPC1-219ENST00000522387 LINC00472Q9H8W2 130 aa7.06□□□□□ -1.28
PABPC1-219ENST00000522387 LPAP08519 4548 aa7.05□□□□□ -1.28
PABPC1-219ENST00000522387 SPAG11AQ6PDA7 123 aa7.05□□□□□ -1.28
PABPC1-219ENST00000522387 H3BPC8 53 aa7.03□□□□□ -1.28
PABPC1-219ENST00000522387 PSPHP1O15172 72 aa7.02□□□□□ -1.28
PABPC1-219ENST00000522387 CD164Q04900 197 aa7.02□□□□□ -1.28
PABPC1-219ENST00000522387 SPANXA2-OT1Q8N9U9 137 aa7.01□□□□□ -1.29
PABPC1-219ENST00000522387 LIMD2Q9BT23 127 aa7□□□□□ -1.29
PABPC1-219ENST00000522387 C1orf195Q5TG92 126 aa7□□□□□ -1.29
PABPC1-219ENST00000522387 MMP24-AS1A0A0U1RRL7 71 aa6.99□□□□□ -1.29
PABPC1-219ENST00000522387 Q96NJ1 140 aa6.99□□□□□ -1.29
PABPC1-219ENST00000522387 V9GYY9 64 aa6.98□□□□□ -1.29
PABPC1-219ENST00000522387 A8MUN3 132 aa6.96□□□□□ -1.29
PABPC1-219ENST00000522387 LRP2P98164 4655 aa6.95□□□□□ -1.3
PABPC1-219ENST00000522387 RPS29P62273 56 aaKnown RBP6.95□□□□□ -1.3
PABPC1-219ENST00000522387 IGHV6-1A0A0B4J1U7 121 aa6.92□□□□□ -1.3
PABPC1-219ENST00000522387 HMCN2Q8NDA2 5059 aa6.92□□□□□ -1.3
PABPC1-219ENST00000522387 Q5VV11 94 aa6.92□□□□□ -1.3
PABPC1-219ENST00000522387 Q8N9P0 234 aaPredicted RBP6.92□□□□□ -1.3
PABPC1-219ENST00000522387 C9orf92A6NGG3 77 aa6.91□□□□□ -1.3
PABPC1-219ENST00000522387 NOTCH2NLQ7Z3S9 236 aa6.91□□□□□ -1.3
PABPC1-219ENST00000522387 ASB16-AS1Q495Z4 193 aa6.9□□□□□ -1.3
PABPC1-219ENST00000522387 C8orf17Q9NRJ1 99 aa6.9□□□□□ -1.3
PABPC1-219ENST00000522387 IGLV7-46A0A075B6I9 117 aa6.9□□□□□ -1.31
PABPC1-219ENST00000522387 TP53AIP1Q9HCN2 124 aa6.9□□□□□ -1.31
PABPC1-219ENST00000522387 PCOTHQ58A44 107 aa6.89□□□□□ -1.31
PABPC1-219ENST00000522387 COA5Q86WW8 74 aa6.89□□□□□ -1.31
PABPC1-219ENST00000522387 PRR15LQ9BU68 103 aa6.88□□□□□ -1.31
PABPC1-219ENST00000522387 NDUFS5O43920 106 aa6.87□□□□□ -1.31
PABPC1-219ENST00000522387 A0A1B0GVX0 72 aa6.86□□□□□ -1.31
PABPC1-219ENST00000522387 CHKB-CPT1BH3BT56 60 aa6.86□□□□□ -1.31
PABPC1-219ENST00000522387 A8MU10 97 aa6.84□□□□□ -1.31
PABPC1-219ENST00000522387 MRPL34Q9BQ48 92 aaKnown RBP6.82□□□□□ -1.32
PABPC1-219ENST00000522387 UBR4Q5T4S7 5183 aa6.82□□□□□ -1.32
PABPC1-219ENST00000522387 PMAIP1Q13794 54 aa6.82□□□□□ -1.32
PABPC1-219ENST00000522387 Q75L30 129 aa6.81□□□□□ -1.32
PABPC1-219ENST00000522387 MUC2Q02817 5179 aa6.8□□□□□ -1.32
PABPC1-219ENST00000522387 LOC101927531A0A1B0GV80 90 aa6.8□□□□□ -1.32
PABPC1-219ENST00000522387 KRTAP13-3Q3SY46 172 aa6.79□□□□□ -1.32
PABPC1-219ENST00000522387 LINC00313P59037 77 aa6.77□□□□□ -1.33
PABPC1-219ENST00000522387 A6NED7 52 aa6.77□□□□□ -1.33
PABPC1-219ENST00000522387 HRES1P13985 223 aa6.76□□□□□ -1.33
PABPC1-219ENST00000522387 LINC01558Q9Y6Z2 57 aa6.76□□□□□ -1.33
PABPC1-219ENST00000522387 TPRXLQ17RH7 258 aa6.75□□□□□ -1.33
PABPC1-219ENST00000522387 LCA10Q71F78 164 aa6.75□□□□□ -1.33
PABPC1-219ENST00000522387 RNF213Q63HN8 5207 aa6.74□□□□□ -1.33
PABPC1-219ENST00000522387 XP32Q5T750 250 aa6.73□□□□□ -1.33
PABPC1-219ENST00000522387 SEC61GP60059 68 aa6.73□□□□□ -1.33
PABPC1-219ENST00000522387 SPTSSBQ8NFR3 76 aa6.73□□□□□ -1.33
PABPC1-219ENST00000522387 Q5W150 140 aa6.72□□□□□ -1.33
PABPC1-219ENST00000522387 ATP11AUNQ6ZP68 121 aa6.71□□□□□ -1.34
PABPC1-219ENST00000522387 CDC42SE1Q9NRR8 79 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms