RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 A8MWP4 228 aa13.23□□□□□ -0.29
PVT1-212ENST00000521951 DSCR10P59022 87 aa13.23□□□□□ -0.29
PVT1-212ENST00000521951 IGHV6-1A0A0B4J1U7 121 aa13.22□□□□□ -0.29
PVT1-212ENST00000521951 J3QR89 54 aa13.22□□□□□ -0.29
PVT1-212ENST00000521951 NDUFB1O75438 58 aa13.22□□□□□ -0.29
PVT1-212ENST00000521951 IGKV3D-7A0A0C4DH55 119 aa13.2□□□□□ -0.3
PVT1-212ENST00000521951 XP32Q5T750 250 aa13.18□□□□□ -0.3
PVT1-212ENST00000521951 NOTCH2NLQ7Z3S9 236 aa13.18□□□□□ -0.3
PVT1-212ENST00000521951 LINC00313P59037 77 aa13.17□□□□□ -0.3
PVT1-212ENST00000521951 PRR15Q8IV56 129 aa13.16□□□□□ -0.3
PVT1-212ENST00000521951 C8orf87E5RJ46 101 aa13.13□□□□□ -0.31
PVT1-212ENST00000521951 K7EQZ3 153 aa13.13□□□□□ -0.31
PVT1-212ENST00000521951 Q8N9L7 120 aa13.1□□□□□ -0.31
PVT1-212ENST00000521951 CXCL6P80162 114 aa13.09□□□□□ -0.31
PVT1-212ENST00000521951 C8orf17Q9NRJ1 99 aa13.09□□□□□ -0.31
PVT1-212ENST00000521951 K7ERU9 68 aa13.08□□□□□ -0.32
PVT1-212ENST00000521951 KRTAP16-1A8MUX0 517 aa13.07□□□□□ -0.32
PVT1-212ENST00000521951 LINC00643Q86TS7 51 aa13.04□□□□□ -0.32
PVT1-212ENST00000521951 MMP24-AS1A0A0U1RRL7 71 aa13.02□□□□□ -0.33
PVT1-212ENST00000521951 ATP5EP2Q5VTU8 51 aa13.01□□□□□ -0.33
PVT1-212ENST00000521951 RPL37P61927 97 aaKnown RBP13□□□□□ -0.33
PVT1-212ENST00000521951 C20orf166-AS1Q96NR2 134 aa13□□□□□ -0.33
PVT1-212ENST00000521951 KRTAP3-3Q9BYR6 98 aa13□□□□□ -0.33
PVT1-212ENST00000521951 KRTAP3-2Q9BYR7 98 aa13□□□□□ -0.33
PVT1-212ENST00000521951 A8MUU9 505 aa12.98□□□□□ -0.33
PVT1-212ENST00000521951 Q75L30 129 aa12.98□□□□□ -0.33
PVT1-212ENST00000521951 MUC17Q685J3 4493 aa12.96□□□□□ -0.33
PVT1-212ENST00000521951 hDV103S1A0JD37 113 aa12.94□□□□□ -0.34
PVT1-212ENST00000521951 SEC61BP60468 96 aaKnown RBP12.94□□□□□ -0.34
PVT1-212ENST00000521951 TMEM254Q8TBM7 123 aa12.93□□□□□ -0.34
PVT1-212ENST00000521951 WFDC13Q8IUB5 93 aa12.92□□□□□ -0.34
PVT1-212ENST00000521951 UBR4Q5T4S7 5183 aa12.9□□□□□ -0.34
PVT1-212ENST00000521951 CASC2Q6XLA1 102 aa12.9□□□□□ -0.34
PVT1-212ENST00000521951 Q8N9P0 234 aaPredicted RBP12.9□□□□□ -0.34
PVT1-212ENST00000521951 MRPL34Q9BQ48 92 aaKnown RBP12.9□□□□□ -0.34
PVT1-212ENST00000521951 HCG22E2RYF7 251 aa12.89□□□□□ -0.35
PVT1-212ENST00000521951 PCOTHQ58A44 107 aa12.89□□□□□ -0.35
PVT1-212ENST00000521951 HIST1H4AP62805 103 aaKnown RBP12.88□□□□□ -0.35
PVT1-212ENST00000521951 ATP11AUNQ6ZP68 121 aa12.85□□□□□ -0.35
PVT1-212ENST00000521951 A0A087WVE0 104 aa12.78□□□□□ -0.36
PVT1-212ENST00000521951 NDUFS5O43920 106 aa12.78□□□□□ -0.36
PVT1-212ENST00000521951 MT-ATP8P03928 68 aa12.75□□□□□ -0.37
PVT1-212ENST00000521951 ZCCHC13Q8WW36 166 aaKnown RBP12.73□□□□□ -0.37
PVT1-212ENST00000521951 KRTAP4-1Q9BYQ7 146 aa12.73□□□□□ -0.37
PVT1-212ENST00000521951 RNF213Q63HN8 5207 aa12.73□□□□□ -0.37
PVT1-212ENST00000521951 IMUPQ9GZP8 106 aa12.67□□□□□ -0.38
PVT1-212ENST00000521951 Q5W150 140 aa12.61□□□□□ -0.39
PVT1-212ENST00000521951 TP53AIP1Q9HCN2 124 aa12.6□□□□□ -0.39
PVT1-212ENST00000521951 MUC2Q02817 5179 aa12.59□□□□□ -0.39
PVT1-212ENST00000521951 SPINK7P58062 85 aa12.48□□□□□ -0.41
PVT1-212ENST00000521951 UQCRQO14949 82 aa12.46□□□□□ -0.42
PVT1-212ENST00000521951 SCGB1A1P11684 91 aa12.46□□□□□ -0.42
PVT1-212ENST00000521951 OCR1Q9BZK8 76 aa12.45□□□□□ -0.42
PVT1-212ENST00000521951 FAM236AA0A1B0GUQ0 79 aa12.44□□□□□ -0.42
PVT1-212ENST00000521951 FAM236BA0A1B0GV22 79 aa12.44□□□□□ -0.42
PVT1-212ENST00000521951 TRAV22A0A0B4J277 110 aa12.41□□□□□ -0.42
PVT1-212ENST00000521951 IGKV2D-30A0A075B6S6 120 aa12.4□□□□□ -0.42
PVT1-212ENST00000521951 IGKV2-30P06310 120 aa12.4□□□□□ -0.42
PVT1-212ENST00000521951 HRES1P13985 223 aa12.38□□□□□ -0.43
PVT1-212ENST00000521951 C7orf65Q6ZTY9 151 aa12.37□□□□□ -0.43
PVT1-212ENST00000521951 H0Y9P7 68 aa12.34□□□□□ -0.43
PVT1-212ENST00000521951 KRTAP19-2Q3LHN2 52 aa12.32□□□□□ -0.44
PVT1-212ENST00000521951 A0A0U1RQV1 116 aa12.31□□□□□ -0.44
PVT1-212ENST00000521951 MPLKIPQ8TAP9 179 aa12.3□□□□□ -0.44
PVT1-212ENST00000521951 ATOX1O00244 68 aa12.29□□□□□ -0.44
PVT1-212ENST00000521951 C5orf47Q569G3 176 aa12.27□□□□□ -0.44
PVT1-212ENST00000521951 SMIM20Q8N5G0 67 aa12.27□□□□□ -0.44
PVT1-212ENST00000521951 LOC101927531A0A1B0GV80 90 aa12.26□□□□□ -0.45
PVT1-212ENST00000521951 FAT4Q6V0I7 4981 aa12.25□□□□□ -0.45
PVT1-212ENST00000521951 TRAV7A0A075B6U4 112 aa12.25□□□□□ -0.45
PVT1-212ENST00000521951 MP68P56378 58 aa12.24□□□□□ -0.45
PVT1-212ENST00000521951 LCE2CQ5TA81 110 aa12.24□□□□□ -0.45
PVT1-212ENST00000521951 CYP4F30PQ9H0H9 118 aa12.24□□□□□ -0.45
PVT1-212ENST00000521951 RBM12B-AS1Q9P1G2 102 aa12.24□□□□□ -0.45
PVT1-212ENST00000521951 LINC00208Q96KT6 92 aa12.22□□□□□ -0.45
PVT1-212ENST00000521951 COX6B2Q6YFQ2 88 aa12.21□□□□□ -0.45
PVT1-212ENST00000521951 C1orf64Q8NEQ6 169 aa12.21□□□□□ -0.45
PVT1-212ENST00000521951 FAM236DA0A1B0GTK5 79 aa12.16□□□□□ -0.46
PVT1-212ENST00000521951 H3BPC8 53 aa12.16□□□□□ -0.46
PVT1-212ENST00000521951 FAM236CP0DP71 79 aa12.16□□□□□ -0.46
PVT1-212ENST00000521951 C4orf26Q17RF5 130 aa12.12□□□□□ -0.47
PVT1-212ENST00000521951 SERP2Q8N6R1 65 aa12.11□□□□□ -0.47
PVT1-212ENST00000521951 FLGP20930 4061 aaPredicted RBP12.06□□□□□ -0.48
PVT1-212ENST00000521951 KLKP1Q107X0 134 aa12.05□□□□□ -0.48
PVT1-212ENST00000521951 MT1HP80294 61 aa12.02□□□□□ -0.48
PVT1-212ENST00000521951 LCE2AQ5TA79 106 aaPredicted RBP12.01□□□□□ -0.49
PVT1-212ENST00000521951 KRTAP3-1Q9BYR8 98 aa11.97□□□□□ -0.49
PVT1-212ENST00000521951 H1FX-AS1Q4G0G2 97 aa11.96□□□□□ -0.5
PVT1-212ENST00000521951 COX7CP15954 63 aa11.95□□□□□ -0.5
PVT1-212ENST00000521951 C20orf197Q8N268 126 aa11.95□□□□□ -0.5
PVT1-212ENST00000521951 SNURFQ9Y675 71 aa11.95□□□□□ -0.5
PVT1-212ENST00000521951 ANAPC13Q9BS18 74 aa11.91□□□□□ -0.5
PVT1-212ENST00000521951 M0R2T5 61 aa11.86□□□□□ -0.51
PVT1-212ENST00000521951 A8MUN3 132 aa11.76□□□□□ -0.53
PVT1-212ENST00000521951 S4R3F8 94 aa11.71□□□□□ -0.53
PVT1-212ENST00000521951 DMAC1Q96GE9 116 aa11.7□□□□□ -0.54
PVT1-212ENST00000521951 KRTAP10-6P60371 365 aaPredicted RBP11.69□□□□□ -0.54
PVT1-212ENST00000521951 CCDC179H3BU77 68 aa11.67□□□□□ -0.54
PVT1-212ENST00000521951 CYSTM1Q9H1C7 97 aa11.67□□□□□ -0.54
PVT1-212ENST00000521951 LCA10Q71F78 164 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms