RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 VPS25Q9BRG1 176 aa10.3□□□□□ -0.76
PABPC1-218ENST00000521865 C8orf87E5RJ46 101 aa10.27□□□□□ -0.77
PABPC1-218ENST00000521865 K7ERJ3 54 aa10.27□□□□□ -0.77
PABPC1-218ENST00000521865 KRTAP9-3Q9BYQ3 159 aa10.27□□□□□ -0.77
PABPC1-218ENST00000521865 A0A1B0GVX0 72 aa10.26□□□□□ -0.77
PABPC1-218ENST00000521865 UBE2V1Q13404 147 aa10.24□□□□□ -0.77
PABPC1-218ENST00000521865 HSD52Q0P140 79 aa10.23□□□□□ -0.77
PABPC1-218ENST00000521865 ZCCHC13Q8WW36 166 aaKnown RBP10.21□□□□□ -0.77
PABPC1-218ENST00000521865 DSCR8Q96T75 97 aa10.2□□□□□ -0.78
PABPC1-218ENST00000521865 RBM3P98179 157 aaKnown RBP10.19□□□□□ -0.78
PABPC1-218ENST00000521865 SPINK7P58062 85 aa10.18□□□□□ -0.78
PABPC1-218ENST00000521865 J3KT08 172 aa10.15□□□□□ -0.78
PABPC1-218ENST00000521865 SCGB1C2P0DMR2 95 aa10.15□□□□□ -0.78
PABPC1-218ENST00000521865 LYRM7Q5U5X0 104 aa10.13□□□□□ -0.79
PABPC1-218ENST00000521865 LINC00846Q9NV44 126 aa10.13□□□□□ -0.79
PABPC1-218ENST00000521865 NDUFB1O75438 58 aa10.12□□□□□ -0.79
PABPC1-218ENST00000521865 C9JAW5 83 aa10.11□□□□□ -0.79
PABPC1-218ENST00000521865 C21orf62-AS1Q17RA5 79 aa10.11□□□□□ -0.79
PABPC1-218ENST00000521865 SYNE2Q8WXH0 6885 aaKnown RBP10.11□□□□□ -0.79
PABPC1-218ENST00000521865 MACF1Q9UPN3 7388 aaKnown RBP10.11□□□□□ -0.79
PABPC1-218ENST00000521865 WFDC13Q8IUB5 93 aa10.08□□□□□ -0.8
PABPC1-218ENST00000521865 Q6ZQT0 140 aa10.07□□□□□ -0.8
PABPC1-218ENST00000521865 A8MWP4 228 aa10.06□□□□□ -0.8
PABPC1-218ENST00000521865 BAALC-AS2P0C853 105 aa10.06□□□□□ -0.8
PABPC1-218ENST00000521865 PYY3Q5JQD4 70 aa10.06□□□□□ -0.8
PABPC1-218ENST00000521865 Q8N9P0 234 aaPredicted RBP10.06□□□□□ -0.8
PABPC1-218ENST00000521865 C8orf17Q9NRJ1 99 aa10.03□□□□□ -0.8
PABPC1-218ENST00000521865 UQCR10Q9UDW1 63 aa10.03□□□□□ -0.8
PABPC1-218ENST00000521865 KRTAP19-6Q3LI70 58 aa10□□□□□ -0.81
PABPC1-218ENST00000521865 Q6ZVQ6 151 aa9.96□□□□□ -0.82
PABPC1-218ENST00000521865 IGKV3D-7A0A0C4DH55 119 aa9.95□□□□□ -0.82
PABPC1-218ENST00000521865 JMJD7-PLA2G4BH0Y9G9 81 aa9.94□□□□□ -0.82
PABPC1-218ENST00000521865 A0A1B0GW54 56 aa9.91□□□□□ -0.82
PABPC1-218ENST00000521865 ATXN8Q156A1 80 aa9.9□□□□□ -0.82
PABPC1-218ENST00000521865 LOC110117498A0A087WWA1 95 aa9.89□□□□□ -0.83
PABPC1-218ENST00000521865 PDE6GP18545 87 aa9.88□□□□□ -0.83
PABPC1-218ENST00000521865 PRR15Q8IV56 129 aa9.88□□□□□ -0.83
PABPC1-218ENST00000521865 NREPQ16612 68 aa9.86□□□□□ -0.83
PABPC1-218ENST00000521865 H1FX-AS1Q4G0G2 97 aa9.86□□□□□ -0.83
PABPC1-218ENST00000521865 C14orf132Q9NPU4 83 aa9.86□□□□□ -0.83
PABPC1-218ENST00000521865 MRPL34Q9BQ48 92 aaKnown RBP9.85□□□□□ -0.83
PABPC1-218ENST00000521865 NAA38Q9BRA0 125 aaKnown RBP9.85□□□□□ -0.83
PABPC1-218ENST00000521865 NDUFS5O43920 106 aa9.84□□□□□ -0.83
PABPC1-218ENST00000521865 TMEM254Q8TBM7 123 aa9.84□□□□□ -0.83
PABPC1-218ENST00000521865 MMP24-AS1A0A0U1RRL7 71 aa9.81□□□□□ -0.84
PABPC1-218ENST00000521865 TMA7Q9Y2S6 64 aaKnown RBP9.79□□□□□ -0.84
PABPC1-218ENST00000521865 hDV103S1A0JD37 113 aa9.78□□□□□ -0.84
PABPC1-218ENST00000521865 M0R143 59 aa9.78□□□□□ -0.84
PABPC1-218ENST00000521865 IGKV2D-30A0A075B6S6 120 aa9.76□□□□□ -0.85
PABPC1-218ENST00000521865 IGKV2-30P06310 120 aa9.76□□□□□ -0.85
PABPC1-218ENST00000521865 K7EQZ3 153 aa9.74□□□□□ -0.85
PABPC1-218ENST00000521865 KRTAP6-3Q3LI67 103 aa9.73□□□□□ -0.85
PABPC1-218ENST00000521865 C7orf65Q6ZTY9 151 aa9.7□□□□□ -0.86
PABPC1-218ENST00000521865 BPY2O14599 106 aa9.65□□□□□ -0.86
PABPC1-218ENST00000521865 Q5W150 140 aa9.64□□□□□ -0.87
PABPC1-218ENST00000521865 C4orf26Q17RF5 130 aa9.6□□□□□ -0.87
PABPC1-218ENST00000521865 FAM236AA0A1B0GUQ0 79 aa9.58□□□□□ -0.88
PABPC1-218ENST00000521865 FAM236BA0A1B0GV22 79 aa9.58□□□□□ -0.88
PABPC1-218ENST00000521865 CASC2Q6XLA1 102 aa9.58□□□□□ -0.88
PABPC1-218ENST00000521865 HCG22E2RYF7 251 aa9.57□□□□□ -0.88
PABPC1-218ENST00000521865 BATFQ16520 125 aa9.56□□□□□ -0.88
PABPC1-218ENST00000521865 C5orf47Q569G3 176 aa9.56□□□□□ -0.88
PABPC1-218ENST00000521865 H3BT86 120 aa9.55□□□□□ -0.88
PABPC1-218ENST00000521865 Q8N9L7 120 aa9.55□□□□□ -0.88
PABPC1-218ENST00000521865 TSTD3H0UI37 97 aa9.53□□□□□ -0.88
PABPC1-218ENST00000521865 NEBP20929 6669 aa9.51□□□□□ -0.89
PABPC1-218ENST00000521865 A6NN06 94 aa9.51□□□□□ -0.89
PABPC1-218ENST00000521865 CXCL6P80162 114 aa9.49□□□□□ -0.89
PABPC1-218ENST00000521865 S4R3F8 94 aa9.45□□□□□ -0.9
PABPC1-218ENST00000521865 Q5VV11 94 aa9.44□□□□□ -0.9
PABPC1-218ENST00000521865 C9orf118A6NHY6 69 aa9.43□□□□□ -0.9
PABPC1-218ENST00000521865 A0A1W2PPM0 123 aa9.42□□□□□ -0.9
PABPC1-218ENST00000521865 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
PABPC1-218ENST00000521865 SMIM6P0DI80 62 aa9.41□□□□□ -0.9
PABPC1-218ENST00000521865 MT1BP07438 61 aa9.4□□□□□ -0.9
PABPC1-218ENST00000521865 C1orf64Q8NEQ6 169 aa9.38□□□□□ -0.91
PABPC1-218ENST00000521865 KRTAP3-1Q9BYR8 98 aa9.38□□□□□ -0.91
PABPC1-218ENST00000521865 MUC12Q9UKN1 5478 aa9.36□□□□□ -0.91
PABPC1-218ENST00000521865 TAX1BP3O14907 124 aa9.36□□□□□ -0.91
PABPC1-218ENST00000521865 LCA10Q71F78 164 aa9.36□□□□□ -0.91
PABPC1-218ENST00000521865 SPRR2GQ9BYE4 73 aa9.34□□□□□ -0.91
PABPC1-218ENST00000521865 KRTAP19-8Q3LI54 63 aa9.33□□□□□ -0.92
PABPC1-218ENST00000521865 UBL5Q9BZL1 73 aa9.33□□□□□ -0.92
PABPC1-218ENST00000521865 SPCS1Q9Y6A9 102 aa9.28□□□□□ -0.92
PABPC1-218ENST00000521865 KRTAP10-5P60370 271 aa9.27□□□□□ -0.93
PABPC1-218ENST00000521865 KLKP1Q107X0 134 aa9.26□□□□□ -0.93
PABPC1-218ENST00000521865 SMCPP49901 116 aaPredicted RBP9.24□□□□□ -0.93
PABPC1-218ENST00000521865 TP53AIP1Q9HCN2 124 aa9.22□□□□□ -0.93
PABPC1-218ENST00000521865 KRTAP20-1Q3LI63 56 aa9.2□□□□□ -0.94
PABPC1-218ENST00000521865 IMUPQ9GZP8 106 aa9.2□□□□□ -0.94
PABPC1-218ENST00000521865 KRTAP3-3Q9BYR6 98 aa9.14□□□□□ -0.95
PABPC1-218ENST00000521865 KRTAP5-9P26371 169 aa9.12□□□□□ -0.95
PABPC1-218ENST00000521865 CRIPTQ9P021 101 aa9.11□□□□□ -0.95
PABPC1-218ENST00000521865 PRO0461Q9UI25 63 aa9.09□□□□□ -0.95
PABPC1-218ENST00000521865 KMT2DO14686 5537 aa9.09□□□□□ -0.96
PABPC1-218ENST00000521865 CYP4F30PQ9H0H9 118 aa9.08□□□□□ -0.96
PABPC1-218ENST00000521865 MDN1Q9NU22 5596 aa9.08□□□□□ -0.96
PABPC1-218ENST00000521865 A0A087WVE0 104 aa9.05□□□□□ -0.96
PABPC1-218ENST00000521865 K7EP34 96 aa9.03□□□□□ -0.96
PABPC1-218ENST00000521865 COL5A1-AS1Q5SY13 56 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms