RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 PRR4Q16378 134 aa6.42□□□□□ -1.38
MRPS28-208ENST00000521605 FAM229BQ4G0N7 80 aa6.42□□□□□ -1.38
MRPS28-208ENST00000521605 KRTAP4-9Q9BYQ8 210 aa6.42□□□□□ -1.38
MRPS28-208ENST00000521605 FAM236AA0A1B0GUQ0 79 aa6.41□□□□□ -1.38
MRPS28-208ENST00000521605 FAM236BA0A1B0GV22 79 aa6.41□□□□□ -1.38
MRPS28-208ENST00000521605 ATOX1O00244 68 aa6.41□□□□□ -1.38
MRPS28-208ENST00000521605 BPY2O14599 106 aa6.4□□□□□ -1.38
MRPS28-208ENST00000521605 CD164Q04900 197 aa6.4□□□□□ -1.38
MRPS28-208ENST00000521605 SSBP3-AS1Q7Z2R9 100 aa6.4□□□□□ -1.38
MRPS28-208ENST00000521605 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.38
MRPS28-208ENST00000521605 ANAPC13Q9BS18 74 aa6.39□□□□□ -1.39
MRPS28-208ENST00000521605 SMIM20Q8N5G0 67 aa6.38□□□□□ -1.39
MRPS28-208ENST00000521605 SS18L2Q9UHA2 77 aa6.38□□□□□ -1.39
MRPS28-208ENST00000521605 PRR26Q8N8Z3 221 aa6.37□□□□□ -1.39
MRPS28-208ENST00000521605 KRTAP4-2Q9BYR5 136 aa6.37□□□□□ -1.39
MRPS28-208ENST00000521605 A0A087WSZ3 146 aa6.36□□□□□ -1.39
MRPS28-208ENST00000521605 J3KT08 172 aa6.36□□□□□ -1.39
MRPS28-208ENST00000521605 C9orf153Q5TBE3 101 aa6.35□□□□□ -1.39
MRPS28-208ENST00000521605 LINC00472Q9H8W2 130 aa6.35□□□□□ -1.39
MRPS28-208ENST00000521605 IGKV4-1P06312 121 aa6.34□□□□□ -1.39
MRPS28-208ENST00000521605 A0A087WVE0 104 aa6.33□□□□□ -1.4
MRPS28-208ENST00000521605 IGLV9-49A0A0B4J1Y8 123 aa6.33□□□□□ -1.4
MRPS28-208ENST00000521605 DSCR10P59022 87 aa6.33□□□□□ -1.4
MRPS28-208ENST00000521605 MOBPQ13875 183 aa6.33□□□□□ -1.4
MRPS28-208ENST00000521605 ASB16-AS1Q495Z4 193 aa6.33□□□□□ -1.4
MRPS28-208ENST00000521605 Q5XG85 94 aa6.33□□□□□ -1.4
MRPS28-208ENST00000521605 UQCRQO14949 82 aa6.31□□□□□ -1.4
MRPS28-208ENST00000521605 KRTAP1-4P0C5Y4 121 aa6.31□□□□□ -1.4
MRPS28-208ENST00000521605 SERP2Q8N6R1 65 aa6.31□□□□□ -1.4
MRPS28-208ENST00000521605 COX7CP15954 63 aa6.3□□□□□ -1.4
MRPS28-208ENST00000521605 A0A0G2JQZ4 141 aa6.29□□□□□ -1.4
MRPS28-208ENST00000521605 A8MWP4 228 aa6.29□□□□□ -1.4
MRPS28-208ENST00000521605 MUC17Q685J3 4493 aa6.29□□□□□ -1.4
MRPS28-208ENST00000521605 TRAV7A0A075B6U4 112 aa6.28□□□□□ -1.4
MRPS28-208ENST00000521605 PRR15Q8IV56 129 aa6.27□□□□□ -1.41
MRPS28-208ENST00000521605 K7EQZ3 153 aa6.26□□□□□ -1.41
MRPS28-208ENST00000521605 RPS29P62273 56 aaKnown RBP6.26□□□□□ -1.41
MRPS28-208ENST00000521605 KRTAP13-2Q52LG2 175 aa6.26□□□□□ -1.41
MRPS28-208ENST00000521605 Q96NJ1 140 aa6.26□□□□□ -1.41
MRPS28-208ENST00000521605 ANAPC11Q9NYG5 84 aa6.26□□□□□ -1.41
MRPS28-208ENST00000521605 A0A087X002 238 aa6.25□□□□□ -1.41
MRPS28-208ENST00000521605 NDUFB1O75438 58 aa6.25□□□□□ -1.41
MRPS28-208ENST00000521605 HCG22E2RYF7 251 aa6.24□□□□□ -1.41
MRPS28-208ENST00000521605 Q8N9L7 120 aa6.24□□□□□ -1.41
MRPS28-208ENST00000521605 OCR1Q9BZK8 76 aa6.23□□□□□ -1.41
MRPS28-208ENST00000521605 SPAG11AQ6PDA7 123 aa6.22□□□□□ -1.41
MRPS28-208ENST00000521605 LIMD2Q9BT23 127 aa6.22□□□□□ -1.41
MRPS28-208ENST00000521605 CCDC179H3BU77 68 aa6.21□□□□□ -1.42
MRPS28-208ENST00000521605 SPINK1P00995 79 aa6.21□□□□□ -1.42
MRPS28-208ENST00000521605 A0A1B0GVX0 72 aa6.18□□□□□ -1.42
MRPS28-208ENST00000521605 KLKP1Q107X0 134 aa6.18□□□□□ -1.42
MRPS28-208ENST00000521605 TYMSOSQ8TAI1 123 aa6.18□□□□□ -1.42
MRPS28-208ENST00000521605 MMP24-AS1A0A0U1RRL7 71 aa6.17□□□□□ -1.42
MRPS28-208ENST00000521605 DEFB116Q30KQ4 102 aa6.17□□□□□ -1.42
MRPS28-208ENST00000521605 HRCT1Q6UXD1 115 aa6.17□□□□□ -1.42
MRPS28-208ENST00000521605 C8orf87E5RJ46 101 aa6.16□□□□□ -1.42
MRPS28-208ENST00000521605 CASC2Q6XLA1 102 aa6.16□□□□□ -1.42
MRPS28-208ENST00000521605 KRTAP4-11Q9BYQ6 195 aa6.16□□□□□ -1.42
MRPS28-208ENST00000521605 NDUFC1O43677 76 aa6.15□□□□□ -1.42
MRPS28-208ENST00000521605 RETNLBQ9BQ08 111 aa6.15□□□□□ -1.42
MRPS28-208ENST00000521605 C5orf47Q569G3 176 aa6.14□□□□□ -1.43
MRPS28-208ENST00000521605 TP53AIP1Q9HCN2 124 aa6.14□□□□□ -1.43
MRPS28-208ENST00000521605 C8orf17Q9NRJ1 99 aa6.14□□□□□ -1.43
MRPS28-208ENST00000521605 hDV103S1A0JD37 113 aa6.13□□□□□ -1.43
MRPS28-208ENST00000521605 C1orf195Q5TG92 126 aa6.13□□□□□ -1.43
MRPS28-208ENST00000521605 LINC00304Q8N9R0 145 aa6.13□□□□□ -1.43
MRPS28-208ENST00000521605 TMEM254Q8TBM7 123 aa6.13□□□□□ -1.43
MRPS28-208ENST00000521605 H3BPC8 53 aa6.12□□□□□ -1.43
MRPS28-208ENST00000521605 C20orf197Q8N268 126 aa6.11□□□□□ -1.43
MRPS28-208ENST00000521605 TMEM258P61165 79 aa6.1□□□□□ -1.43
MRPS28-208ENST00000521605 WFDC13Q8IUB5 93 aa6.1□□□□□ -1.43
MRPS28-208ENST00000521605 MRPL34Q9BQ48 92 aaKnown RBP6.09□□□□□ -1.43
MRPS28-208ENST00000521605 IGHV6-1A0A0B4J1U7 121 aa6.08□□□□□ -1.44
MRPS28-208ENST00000521605 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
MRPS28-208ENST00000521605 KRTAP9-7A8MTY7 169 aa6.07□□□□□ -1.44
MRPS28-208ENST00000521605 TPRXLQ17RH7 258 aa6.07□□□□□ -1.44
MRPS28-208ENST00000521605 ZCCHC13Q8WW36 166 aaKnown RBP6.07□□□□□ -1.44
MRPS28-208ENST00000521605 MP68P56378 58 aa6.06□□□□□ -1.44
MRPS28-208ENST00000521605 IGLV7-46A0A075B6I9 117 aa6.05□□□□□ -1.44
MRPS28-208ENST00000521605 H7BZZ5 65 aa6.05□□□□□ -1.44
MRPS28-208ENST00000521605 LINC00313P59037 77 aa6.05□□□□□ -1.44
MRPS28-208ENST00000521605 ATP5EP56381 51 aaPredicted RBP6.04□□□□□ -1.44
MRPS28-208ENST00000521605 TRAV22A0A0B4J277 110 aa6.03□□□□□ -1.44
MRPS28-208ENST00000521605 Q8N9P0 234 aaPredicted RBP6.03□□□□□ -1.44
MRPS28-208ENST00000521605 CYSTM1Q9H1C7 97 aa6.02□□□□□ -1.45
MRPS28-208ENST00000521605 KRTAP4-1Q9BYQ7 146 aa6.01□□□□□ -1.45
MRPS28-208ENST00000521605 H0Y9P7 68 aa6□□□□□ -1.45
MRPS28-208ENST00000521605 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
MRPS28-208ENST00000521605 SNURFQ9Y675 71 aa6□□□□□ -1.45
MRPS28-208ENST00000521605 KRTAP16-1A8MUX0 517 aa5.99□□□□□ -1.45
MRPS28-208ENST00000521605 RPS28P62857 69 aaKnown RBP5.99□□□□□ -1.45
MRPS28-208ENST00000521605 FAM236DA0A1B0GTK5 79 aa5.97□□□□□ -1.45
MRPS28-208ENST00000521605 FAM236CP0DP71 79 aa5.97□□□□□ -1.45
MRPS28-208ENST00000521605 KRTAP13-3Q3SY46 172 aa5.97□□□□□ -1.45
MRPS28-208ENST00000521605 FP248Q71RG6 208 aaPredicted RBP5.96□□□□□ -1.46
MRPS28-208ENST00000521605 SPANXA2-OT1Q8N9U9 137 aa5.96□□□□□ -1.46
MRPS28-208ENST00000521605 LOC101927531A0A1B0GV80 90 aa5.95□□□□□ -1.46
MRPS28-208ENST00000521605 C1orf64Q8NEQ6 169 aa5.95□□□□□ -1.46
MRPS28-208ENST00000521605 LINC00208Q96KT6 92 aa5.95□□□□□ -1.46
MRPS28-208ENST00000521605 NDUFS5O43920 106 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms