RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 PSMB2P49721 201 aa7.59□□□□□ -1.19
CSMD1-207ENST00000520451 RBM12B-AS1Q9P1G2 102 aa7.59□□□□□ -1.19
CSMD1-207ENST00000520451 IGHV6-1A0A0B4J1U7 121 aa7.58□□□□□ -1.2
CSMD1-207ENST00000520451 TRACP01848 142 aa7.58□□□□□ -1.2
CSMD1-207ENST00000520451 CCKP06307 115 aa7.58□□□□□ -1.2
CSMD1-207ENST00000520451 HRES1P13985 223 aa7.58□□□□□ -1.2
CSMD1-207ENST00000520451 LINC00472Q9H8W2 130 aa7.58□□□□□ -1.2
CSMD1-207ENST00000520451 TMEM256-PLSCR3K7ERE1 68 aa7.57□□□□□ -1.2
CSMD1-207ENST00000520451 MPLKIPQ8TAP9 179 aa7.57□□□□□ -1.2
CSMD1-207ENST00000520451 C9orf118A6NHY6 69 aa7.55□□□□□ -1.2
CSMD1-207ENST00000520451 KRTAP9-7A8MTY7 169 aa7.55□□□□□ -1.2
CSMD1-207ENST00000520451 COX6CP09669 75 aa7.54□□□□□ -1.2
CSMD1-207ENST00000520451 MT1FP04733 61 aa7.53□□□□□ -1.2
CSMD1-207ENST00000520451 UBE2V1Q13404 147 aa7.52□□□□□ -1.21
CSMD1-207ENST00000520451 VPS25Q9BRG1 176 aa7.52□□□□□ -1.21
CSMD1-207ENST00000520451 NAA38Q9BRA0 125 aaKnown RBP7.51□□□□□ -1.21
CSMD1-207ENST00000520451 A0A1B0GVX0 72 aa7.5□□□□□ -1.21
CSMD1-207ENST00000520451 C8orf87E5RJ46 101 aa7.5□□□□□ -1.21
CSMD1-207ENST00000520451 KRTAP10-10P60014 251 aa7.5□□□□□ -1.21
CSMD1-207ENST00000520451 A0A1W2PPM0 123 aa7.49□□□□□ -1.21
CSMD1-207ENST00000520451 LCE2BO14633 110 aa7.48□□□□□ -1.21
CSMD1-207ENST00000520451 FCGBPQ9Y6R7 5405 aaPredicted RBP7.48□□□□□ -1.21
CSMD1-207ENST00000520451 RBM3P98179 157 aaKnown RBP7.47□□□□□ -1.21
CSMD1-207ENST00000520451 KRTAP9-3Q9BYQ3 159 aa7.47□□□□□ -1.21
CSMD1-207ENST00000520451 SCGB1A1P11684 91 aa7.46□□□□□ -1.22
CSMD1-207ENST00000520451 MTURNQ8N3F0 131 aa7.46□□□□□ -1.22
CSMD1-207ENST00000520451 DSCR8Q96T75 97 aa7.46□□□□□ -1.22
CSMD1-207ENST00000520451 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
CSMD1-207ENST00000520451 ZCCHC13Q8WW36 166 aaKnown RBP7.45□□□□□ -1.22
CSMD1-207ENST00000520451 SCGB1C2P0DMR2 95 aa7.44□□□□□ -1.22
CSMD1-207ENST00000520451 J3KT08 172 aa7.42□□□□□ -1.22
CSMD1-207ENST00000520451 K7EP34 96 aa7.42□□□□□ -1.22
CSMD1-207ENST00000520451 SPINK7P58062 85 aa7.42□□□□□ -1.22
CSMD1-207ENST00000520451 SPCS1Q9Y6A9 102 aa7.41□□□□□ -1.22
CSMD1-207ENST00000520451 C9JAW5 83 aa7.4□□□□□ -1.22
CSMD1-207ENST00000520451 LYRM7Q5U5X0 104 aa7.4□□□□□ -1.22
CSMD1-207ENST00000520451 BAALC-AS2P0C853 105 aa7.39□□□□□ -1.23
CSMD1-207ENST00000520451 Q6ZQT0 140 aa7.38□□□□□ -1.23
CSMD1-207ENST00000520451 NDUFB1O75438 58 aa7.37□□□□□ -1.23
CSMD1-207ENST00000520451 Q8N9P0 234 aaPredicted RBP7.37□□□□□ -1.23
CSMD1-207ENST00000520451 GTF2H5Q6ZYL4 71 aa7.36□□□□□ -1.23
CSMD1-207ENST00000520451 ATXN8Q156A1 80 aa7.35□□□□□ -1.23
CSMD1-207ENST00000520451 K7ERU9 68 aa7.34□□□□□ -1.23
CSMD1-207ENST00000520451 WFDC13Q8IUB5 93 aa7.34□□□□□ -1.23
CSMD1-207ENST00000520451 C8orf17Q9NRJ1 99 aa7.34□□□□□ -1.23
CSMD1-207ENST00000520451 PRO0461Q9UI25 63 aa7.34□□□□□ -1.23
CSMD1-207ENST00000520451 A8MWP4 228 aa7.33□□□□□ -1.24
CSMD1-207ENST00000520451 IGKV3D-7A0A0C4DH55 119 aa7.3□□□□□ -1.24
CSMD1-207ENST00000520451 SMCPP49901 116 aaPredicted RBP7.3□□□□□ -1.24
CSMD1-207ENST00000520451 LOC110117498A0A087WWA1 95 aa7.29□□□□□ -1.24
CSMD1-207ENST00000520451 JMJD7-PLA2G4BH0Y9G9 81 aa7.29□□□□□ -1.24
CSMD1-207ENST00000520451 Q6ZVQ6 151 aa7.28□□□□□ -1.24
CSMD1-207ENST00000520451 LINC00846Q9NV44 126 aa7.28□□□□□ -1.24
CSMD1-207ENST00000520451 A0A1B0GW54 56 aa7.27□□□□□ -1.25
CSMD1-207ENST00000520451 F8W1H4 67 aa7.27□□□□□ -1.25
CSMD1-207ENST00000520451 MACF1Q9UPN3 7388 aaKnown RBP7.27□□□□□ -1.25
CSMD1-207ENST00000520451 H3BT86 120 aa7.25□□□□□ -1.25
CSMD1-207ENST00000520451 PDE6GP18545 87 aa7.25□□□□□ -1.25
CSMD1-207ENST00000520451 KRTAP19-6Q3LI70 58 aa7.25□□□□□ -1.25
CSMD1-207ENST00000520451 PRR15Q8IV56 129 aa7.24□□□□□ -1.25
CSMD1-207ENST00000520451 C14orf132Q9NPU4 83 aa7.24□□□□□ -1.25
CSMD1-207ENST00000520451 NREPQ16612 68 aa7.21□□□□□ -1.26
CSMD1-207ENST00000520451 MMP24-AS1A0A0U1RRL7 71 aa7.2□□□□□ -1.26
CSMD1-207ENST00000520451 C5orf47Q569G3 176 aa7.2□□□□□ -1.26
CSMD1-207ENST00000520451 TMEM254Q8TBM7 123 aa7.2□□□□□ -1.26
CSMD1-207ENST00000520451 MRPL34Q9BQ48 92 aaKnown RBP7.2□□□□□ -1.26
CSMD1-207ENST00000520451 SYNE2Q8WXH0 6885 aaKnown RBP7.19□□□□□ -1.26
CSMD1-207ENST00000520451 ETDBQ3ZM63 59 aa7.18□□□□□ -1.26
CSMD1-207ENST00000520451 H1FX-AS1Q4G0G2 97 aa7.18□□□□□ -1.26
CSMD1-207ENST00000520451 NDUFS5O43920 106 aa7.16□□□□□ -1.26
CSMD1-207ENST00000520451 hDV103S1A0JD37 113 aa7.15□□□□□ -1.26
CSMD1-207ENST00000520451 K7EQZ3 153 aa7.14□□□□□ -1.27
CSMD1-207ENST00000520451 IGKV2D-30A0A075B6S6 120 aa7.12□□□□□ -1.27
CSMD1-207ENST00000520451 IGKV2-30P06310 120 aa7.12□□□□□ -1.27
CSMD1-207ENST00000520451 C7orf65Q6ZTY9 151 aa7.08□□□□□ -1.28
CSMD1-207ENST00000520451 BPY2O14599 106 aa7.07□□□□□ -1.28
CSMD1-207ENST00000520451 Q5W150 140 aa7.06□□□□□ -1.28
CSMD1-207ENST00000520451 J3QR89 54 aa7.03□□□□□ -1.28
CSMD1-207ENST00000520451 KRTAP6-3Q3LI67 103 aa7.02□□□□□ -1.29
CSMD1-207ENST00000520451 CASC2Q6XLA1 102 aa7.01□□□□□ -1.29
CSMD1-207ENST00000520451 Q8N9L7 120 aa7.01□□□□□ -1.29
CSMD1-207ENST00000520451 HCG22E2RYF7 251 aa7□□□□□ -1.29
CSMD1-207ENST00000520451 C4orf26Q17RF5 130 aa7□□□□□ -1.29
CSMD1-207ENST00000520451 FAM240AA0A1B0GVK7 77 aa6.98□□□□□ -1.29
CSMD1-207ENST00000520451 SMIM20Q8N5G0 67 aa6.97□□□□□ -1.29
CSMD1-207ENST00000520451 CXCL6P80162 114 aa6.95□□□□□ -1.3
CSMD1-207ENST00000520451 ACYP1P07311 99 aa6.94□□□□□ -1.3
CSMD1-207ENST00000520451 FAM236AA0A1B0GUQ0 79 aa6.93□□□□□ -1.3
CSMD1-207ENST00000520451 FAM236BA0A1B0GV22 79 aa6.93□□□□□ -1.3
CSMD1-207ENST00000520451 S4R3F8 94 aa6.89□□□□□ -1.31
CSMD1-207ENST00000520451 SEC61GP60059 68 aa6.88□□□□□ -1.31
CSMD1-207ENST00000520451 A6NN06 94 aa6.87□□□□□ -1.31
CSMD1-207ENST00000520451 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
CSMD1-207ENST00000520451 ANAPC13Q9BS18 74 aa6.86□□□□□ -1.31
CSMD1-207ENST00000520451 MT1BP07438 61 aa6.85□□□□□ -1.31
CSMD1-207ENST00000520451 Q5VV11 94 aa6.85□□□□□ -1.31
CSMD1-207ENST00000520451 CSAG1Q6PB30 78 aa6.85□□□□□ -1.31
CSMD1-207ENST00000520451 UBL5Q9BZL1 73 aa6.85□□□□□ -1.31
CSMD1-207ENST00000520451 C1orf64Q8NEQ6 169 aa6.84□□□□□ -1.31
CSMD1-207ENST00000520451 LCA10Q71F78 164 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms