RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 LEAP2Q969E1 77 aa0.79□□□□□ -2.28
HMGB1P46-201ENST00000520062 PKD1L1Q8TDX9 2849 aa0.79□□□□□ -2.28
HMGB1P46-201ENST00000520062 TNRC18O15417 2968 aaPredicted RBP0.79□□□□□ -2.28
HMGB1P46-201ENST00000520062 DMBT1Q9UGM3 2413 aaPredicted RBP0.78□□□□□ -2.28
HMGB1P46-201ENST00000520062 K7EIM0 57 aa0.78□□□□□ -2.28
HMGB1P46-201ENST00000520062 M0QZ58 72 aa0.78□□□□□ -2.28
HMGB1P46-201ENST00000520062 TOMM7Q9P0U1 55 aa0.78□□□□□ -2.28
HMGB1P46-201ENST00000520062 PTPN13Q12923 2485 aa0.78□□□□□ -2.28
HMGB1P46-201ENST00000520062 UNC79Q9P2D8 2635 aa0.78□□□□□ -2.29
HMGB1P46-201ENST00000520062 PDZD2O15018 2839 aa0.77□□□□□ -2.29
HMGB1P46-201ENST00000520062 DCHS2Q6V1P9 2916 aa0.77□□□□□ -2.29
HMGB1P46-201ENST00000520062 KRTAP2-3P0C7H8 128 aa0.77□□□□□ -2.29
HMGB1P46-201ENST00000520062 KRTAP2-4Q9BYR9 128 aa0.77□□□□□ -2.29
HMGB1P46-201ENST00000520062 KRTAP2-1Q9BYU5 128 aa0.77□□□□□ -2.29
HMGB1P46-201ENST00000520062 SETXQ7Z333 2677 aaKnown RBP0.76□□□□□ -2.29
HMGB1P46-201ENST00000520062 APC2O95996 2303 aa0.76□□□□□ -2.29
HMGB1P46-201ENST00000520062 H3BSH0 61 aa0.76□□□□□ -2.29
HMGB1P46-201ENST00000520062 TMEM167AQ8TBQ9 72 aa0.76□□□□□ -2.29
HMGB1P46-201ENST00000520062 CSMD3Q7Z407 3707 aa0.76□□□□□ -2.29
HMGB1P46-201ENST00000520062 USP9YO00507 2555 aaPredicted RBP0.75□□□□□ -2.29
HMGB1P46-201ENST00000520062 MTORP42345 2549 aa0.75□□□□□ -2.29
HMGB1P46-201ENST00000520062 SPINK1P00995 79 aa0.75□□□□□ -2.29
HMGB1P46-201ENST00000520062 GCN1Q92616 2671 aaKnown RBP0.75□□□□□ -2.29
HMGB1P46-201ENST00000520062 COL12A1Q99715 3063 aa0.75□□□□□ -2.29
HMGB1P46-201ENST00000520062 ITPR3Q14573 2671 aa0.74□□□□□ -2.29
HMGB1P46-201ENST00000520062 DEFB135Q30KP9 77 aa0.74□□□□□ -2.29
HMGB1P46-201ENST00000520062 SPINK6Q6UWN8 80 aa0.74□□□□□ -2.29
HMGB1P46-201ENST00000520062 ZFYVE26Q68DK2 2539 aa0.74□□□□□ -2.29
HMGB1P46-201ENST00000520062 NCOR2Q9Y618 2525 aa0.74□□□□□ -2.29
HMGB1P46-201ENST00000520062 TENM3Q9P273 2699 aa0.73□□□□□ -2.29
HMGB1P46-201ENST00000520062 NBEAQ8NFP9 2946 aa0.73□□□□□ -2.29
HMGB1P46-201ENST00000520062 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
HMGB1P46-201ENST00000520062 UTP20O75691 2785 aaKnown RBP0.73□□□□□ -2.29
HMGB1P46-201ENST00000520062 CRYBG3Q68DQ2 2970 aa0.72□□□□□ -2.29
HMGB1P46-201ENST00000520062 FRAS1Q86XX4 4008 aa0.72□□□□□ -2.29
HMGB1P46-201ENST00000520062 ACANP16112 2415 aa0.72□□□□□ -2.29
HMGB1P46-201ENST00000520062 C9orf92A6NGG3 77 aa0.72□□□□□ -2.29
HMGB1P46-201ENST00000520062 M0R2T5 61 aa0.72□□□□□ -2.29
HMGB1P46-201ENST00000520062 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
HMGB1P46-201ENST00000520062 NBEAL2Q6ZNJ1 2754 aa0.72□□□□□ -2.29
HMGB1P46-201ENST00000520062 SPG11Q96JI7 2443 aa0.72□□□□□ -2.29
HMGB1P46-201ENST00000520062 ANKRD11Q6UB99 2663 aaPredicted RBP0.71□□□□□ -2.29
HMGB1P46-201ENST00000520062 TACC2O95359 2948 aa0.71□□□□□ -2.3
HMGB1P46-201ENST00000520062 FLNBO75369 2602 aaKnown RBP0.7□□□□□ -2.3
HMGB1P46-201ENST00000520062 NSD1Q96L73 2696 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P46-201ENST00000520062 TNP1P09430 55 aa0.69□□□□□ -2.3
HMGB1P46-201ENST00000520062 USP9XQ93008 2570 aaPredicted RBP0.69□□□□□ -2.3
HMGB1P46-201ENST00000520062 ITPR1Q14643 2758 aa0.68□□□□□ -2.3
HMGB1P46-201ENST00000520062 U3KQA8 63 aa0.68□□□□□ -2.3
HMGB1P46-201ENST00000520062 BSNQ9UPA5 3926 aa0.68□□□□□ -2.3
HMGB1P46-201ENST00000520062 DMXL1Q9Y485 3027 aa0.68□□□□□ -2.3
HMGB1P46-201ENST00000520062 LRBAP50851 2863 aa0.68□□□□□ -2.3
HMGB1P46-201ENST00000520062 HRNRQ86YZ3 2850 aaPredicted RBP0.68□□□□□ -2.3
HMGB1P46-201ENST00000520062 HIVEP1P15822 2718 aa0.68□□□□□ -2.3
HMGB1P46-201ENST00000520062 TLN2Q9Y4G6 2542 aa0.68□□□□□ -2.3
HMGB1P46-201ENST00000520062 ANKHD1Q8IWZ3 2542 aaKnown RBP0.67□□□□□ -2.3
HMGB1P46-201ENST00000520062 IGSF10Q6WRI0 2623 aa0.67□□□□□ -2.3
HMGB1P46-201ENST00000520062 DEFB104AQ8WTQ1 72 aa0.67□□□□□ -2.3
HMGB1P46-201ENST00000520062 CFAP54Q96N23 3096 aa0.67□□□□□ -2.3
HMGB1P46-201ENST00000520062 H3BUX3 64 aa0.66□□□□□ -2.3
HMGB1P46-201ENST00000520062 RPL39P5Q59GN2 51 aa0.66□□□□□ -2.3
HMGB1P46-201ENST00000520062 ANK2Q01484 3957 aa0.66□□□□□ -2.3
HMGB1P46-201ENST00000520062 KALRNO60229 2985 aa0.66□□□□□ -2.3
HMGB1P46-201ENST00000520062 ZANQ9Y493 2812 aa0.65□□□□□ -2.3
HMGB1P46-201ENST00000520062 CACNA1AO00555 2505 aa0.65□□□□□ -2.31
HMGB1P46-201ENST00000520062 ACACBO00763 2458 aa0.65□□□□□ -2.31
HMGB1P46-201ENST00000520062 ZFHX4Q86UP3 3567 aa0.65□□□□□ -2.31
HMGB1P46-201ENST00000520062 MYO18BQ8IUG5 2567 aa0.65□□□□□ -2.31
HMGB1P46-201ENST00000520062 WDR87Q6ZQQ6 2873 aa0.65□□□□□ -2.31
HMGB1P46-201ENST00000520062 PRUNE2Q8WUY3 3088 aa0.65□□□□□ -2.31
HMGB1P46-201ENST00000520062 LYSTQ99698 3801 aa0.65□□□□□ -2.31
HMGB1P46-201ENST00000520062 CELSR3Q9NYQ7 3312 aa0.64□□□□□ -2.31
HMGB1P46-201ENST00000520062 PRKDCP78527 4128 aaKnown RBP0.64□□□□□ -2.31
HMGB1P46-201ENST00000520062 DMXL2Q8TDJ6 3036 aa0.64□□□□□ -2.31
HMGB1P46-201ENST00000520062 SONP18583 2426 aaKnown RBP0.64□□□□□ -2.31
HMGB1P46-201ENST00000520062 SPENQ96T58 3664 aaKnown RBP0.63□□□□□ -2.31
HMGB1P46-201ENST00000520062 RANBP2P49792 3224 aaKnown RBP0.63□□□□□ -2.31
HMGB1P46-201ENST00000520062 ATMQ13315 3056 aa0.63□□□□□ -2.31
HMGB1P46-201ENST00000520062 DEFB108AA8MXU0 73 aa0.63□□□□□ -2.31
HMGB1P46-201ENST00000520062 SPART-AS1P0CW21 52 aa0.63□□□□□ -2.31
HMGB1P46-201ENST00000520062 COL7A1Q02388 2944 aa0.63□□□□□ -2.31
HMGB1P46-201ENST00000520062 CFAP46Q8IYW2 2715 aa0.63□□□□□ -2.31
HMGB1P46-201ENST00000520062 FLNAP21333 2647 aaKnown RBP0.63□□□□□ -2.31
HMGB1P46-201ENST00000520062 STAB1Q9NY15 2570 aa0.62□□□□□ -2.31
HMGB1P46-201ENST00000520062 MXRA5Q9NR99 2828 aa0.62□□□□□ -2.31
HMGB1P46-201ENST00000520062 TEX15Q9BXT5 2789 aa0.62□□□□□ -2.31
HMGB1P46-201ENST00000520062 MAST4O15021 2626 aa0.61□□□□□ -2.31
HMGB1P46-201ENST00000520062 FRYLO94915 3013 aa0.61□□□□□ -2.31
HMGB1P46-201ENST00000520062 TGP01266 2768 aa0.61□□□□□ -2.31
HMGB1P46-201ENST00000520062 FASNP49327 2511 aaKnown RBP0.61□□□□□ -2.31
HMGB1P46-201ENST00000520062 H3BNG1 76 aa0.61□□□□□ -2.31
HMGB1P46-201ENST00000520062 RHPN1-AS1Q9BWJ2 59 aa0.61□□□□□ -2.31
HMGB1P46-201ENST00000520062 DNAH12Q6ZR08 3092 aa0.61□□□□□ -2.31
HMGB1P46-201ENST00000520062 DOPEY1Q5JWR5 2465 aa0.61□□□□□ -2.31
HMGB1P46-201ENST00000520062 SPTAN1Q13813 2472 aaKnown RBP0.6□□□□□ -2.31
HMGB1P46-201ENST00000520062 TEP1Q99973 2627 aaKnown RBP0.6□□□□□ -2.31
HMGB1P46-201ENST00000520062 FAT2Q9NYQ8 4349 aa0.6□□□□□ -2.31
HMGB1P46-201ENST00000520062 ADGRG4Q8IZF6 3080 aa0.59□□□□□ -2.32
HMGB1P46-201ENST00000520062 HTTP42858 3142 aa0.59□□□□□ -2.32
HMGB1P46-201ENST00000520062 TNXBP22105 4242 aa0.59□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms