RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 IGHV6-1A0A0B4J1U7 121 aa5.88□□□□□ -1.47
PDGFRB-205ENST00000519575 SMR3BP02814 79 aaPredicted RBP5.88□□□□□ -1.47
PDGFRB-205ENST00000519575 A0A0U1RQV1 116 aa5.86□□□□□ -1.47
PDGFRB-205ENST00000519575 KRTAP10-4P60372 401 aaPredicted RBP5.85□□□□□ -1.47
PDGFRB-205ENST00000519575 MRPL34Q9BQ48 92 aaKnown RBP5.85□□□□□ -1.47
PDGFRB-205ENST00000519575 TRAV22A0A0B4J277 110 aa5.84□□□□□ -1.47
PDGFRB-205ENST00000519575 C1orf195Q5TG92 126 aa5.84□□□□□ -1.47
PDGFRB-205ENST00000519575 PKHD1P08F94 4074 aa5.84□□□□□ -1.48
PDGFRB-205ENST00000519575 LRP1BQ9NZR2 4599 aa5.83□□□□□ -1.48
PDGFRB-205ENST00000519575 PRR26Q8N8Z3 221 aa5.83□□□□□ -1.48
PDGFRB-205ENST00000519575 DYNC1H1Q14204 4646 aaKnown RBP5.82□□□□□ -1.48
PDGFRB-205ENST00000519575 H7BZZ5 65 aa5.82□□□□□ -1.48
PDGFRB-205ENST00000519575 LINC00313P59037 77 aa5.82□□□□□ -1.48
PDGFRB-205ENST00000519575 FAM236DA0A1B0GTK5 79 aa5.81□□□□□ -1.48
PDGFRB-205ENST00000519575 H0Y9P7 68 aa5.81□□□□□ -1.48
PDGFRB-205ENST00000519575 NDUFS5O43920 106 aa5.81□□□□□ -1.48
PDGFRB-205ENST00000519575 FAM236CP0DP71 79 aa5.81□□□□□ -1.48
PDGFRB-205ENST00000519575 SNURFQ9Y675 71 aa5.81□□□□□ -1.48
PDGFRB-205ENST00000519575 VPS13BQ7Z7G8 4022 aa5.81□□□□□ -1.48
PDGFRB-205ENST00000519575 Q5VSD8 79 aa5.8□□□□□ -1.48
PDGFRB-205ENST00000519575 KMT2CQ8NEZ4 4911 aaKnown RBP5.78□□□□□ -1.48
PDGFRB-205ENST00000519575 RPS28P62857 69 aaKnown RBP5.78□□□□□ -1.48
PDGFRB-205ENST00000519575 ZCCHC13Q8WW36 166 aaKnown RBP5.78□□□□□ -1.48
PDGFRB-205ENST00000519575 LINC00208Q96KT6 92 aa5.77□□□□□ -1.49
PDGFRB-205ENST00000519575 C1orf64Q8NEQ6 169 aa5.76□□□□□ -1.49
PDGFRB-205ENST00000519575 CYSTM1Q9H1C7 97 aa5.76□□□□□ -1.49
PDGFRB-205ENST00000519575 LOC101927531A0A1B0GV80 90 aa5.75□□□□□ -1.49
PDGFRB-205ENST00000519575 APOBP04114 4563 aaKnown RBP5.75□□□□□ -1.49
PDGFRB-205ENST00000519575 Q8N1X5 172 aa5.74□□□□□ -1.49
PDGFRB-205ENST00000519575 Q8N9P0 234 aaPredicted RBP5.74□□□□□ -1.49
PDGFRB-205ENST00000519575 SPANXA2-OT1Q8N9U9 137 aa5.74□□□□□ -1.49
PDGFRB-205ENST00000519575 SERP1Q9Y6X1 66 aa5.73□□□□□ -1.49
PDGFRB-205ENST00000519575 FP248Q71RG6 208 aaPredicted RBP5.7□□□□□ -1.5
PDGFRB-205ENST00000519575 NOTCH2NLQ7Z3S9 236 aa5.7□□□□□ -1.5
PDGFRB-205ENST00000519575 KRTAP10-8P60410 259 aa5.68□□□□□ -1.5
PDGFRB-205ENST00000519575 CYP4F30PQ9H0H9 118 aa5.68□□□□□ -1.5
PDGFRB-205ENST00000519575 KRTAP16-1A8MUX0 517 aa5.67□□□□□ -1.5
PDGFRB-205ENST00000519575 OXTP01178 125 aa5.66□□□□□ -1.5
PDGFRB-205ENST00000519575 PKHD1L1Q86WI1 4243 aa5.66□□□□□ -1.5
PDGFRB-205ENST00000519575 KRTAP13-3Q3SY46 172 aa5.64□□□□□ -1.51
PDGFRB-205ENST00000519575 IGLV7-46A0A075B6I9 117 aa5.63□□□□□ -1.51
PDGFRB-205ENST00000519575 RYR3Q15413 4870 aa5.62□□□□□ -1.51
PDGFRB-205ENST00000519575 Q5W150 140 aa5.62□□□□□ -1.51
PDGFRB-205ENST00000519575 FLG2Q5D862 2391 aaPredicted RBP5.62□□□□□ -1.51
PDGFRB-205ENST00000519575 RYR1P21817 5038 aa5.62□□□□□ -1.51
PDGFRB-205ENST00000519575 SMIM26A0A096LP01 95 aa5.61□□□□□ -1.51
PDGFRB-205ENST00000519575 FAT1Q14517 4588 aa5.61□□□□□ -1.51
PDGFRB-205ENST00000519575 C20orf166-AS1Q96NR2 134 aa5.61□□□□□ -1.51
PDGFRB-205ENST00000519575 A8MUU9 505 aa5.6□□□□□ -1.51
PDGFRB-205ENST00000519575 IGKV2-30P06310 120 aa5.59□□□□□ -1.51
PDGFRB-205ENST00000519575 PCOTHQ58A44 107 aa5.58□□□□□ -1.52
PDGFRB-205ENST00000519575 C7orf65Q6ZTY9 151 aa5.58□□□□□ -1.52
PDGFRB-205ENST00000519575 Q75L30 129 aa5.58□□□□□ -1.52
PDGFRB-205ENST00000519575 HSPG2P98160 4391 aa5.58□□□□□ -1.52
PDGFRB-205ENST00000519575 RETNLBQ9BQ08 111 aa5.55□□□□□ -1.52
PDGFRB-205ENST00000519575 C9orf92A6NGG3 77 aa5.54□□□□□ -1.52
PDGFRB-205ENST00000519575 V9GYY9 64 aa5.54□□□□□ -1.52
PDGFRB-205ENST00000519575 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
PDGFRB-205ENST00000519575 MT1HL1P0DM35 61 aa5.53□□□□□ -1.52
PDGFRB-205ENST00000519575 ACYP2P14621 99 aa5.53□□□□□ -1.52
PDGFRB-205ENST00000519575 PRR4Q16378 134 aa5.52□□□□□ -1.53
PDGFRB-205ENST00000519575 KIAA1109Q2LD37 5005 aa5.51□□□□□ -1.53
PDGFRB-205ENST00000519575 A8MUN3 132 aa5.51□□□□□ -1.53
PDGFRB-205ENST00000519575 HRES1P13985 223 aa5.51□□□□□ -1.53
PDGFRB-205ENST00000519575 ATP11AUNQ6ZP68 121 aa5.51□□□□□ -1.53
PDGFRB-205ENST00000519575 DMAC1Q96GE9 116 aa5.5□□□□□ -1.53
PDGFRB-205ENST00000519575 DMBT1Q9UGM3 2413 aaPredicted RBP5.5□□□□□ -1.53
PDGFRB-205ENST00000519575 COA5Q86WW8 74 aa5.49□□□□□ -1.53
PDGFRB-205ENST00000519575 RPL37P61927 97 aaKnown RBP5.47□□□□□ -1.53
PDGFRB-205ENST00000519575 TPRXLQ17RH7 258 aa5.47□□□□□ -1.53
PDGFRB-205ENST00000519575 CHKB-CPT1BH3BT56 60 aa5.45□□□□□ -1.54
PDGFRB-205ENST00000519575 Q1T7F1 81 aa5.45□□□□□ -1.54
PDGFRB-205ENST00000519575 TNXBP22105 4242 aa5.45□□□□□ -1.54
PDGFRB-205ENST00000519575 J3QL48 77 aa5.44□□□□□ -1.54
PDGFRB-205ENST00000519575 EPPK1P58107 5090 aaKnown RBP5.43□□□□□ -1.54
PDGFRB-205ENST00000519575 XP32Q5T750 250 aa5.43□□□□□ -1.54
PDGFRB-205ENST00000519575 KRTAP17-1Q9BYP8 105 aa5.43□□□□□ -1.54
PDGFRB-205ENST00000519575 FAT3Q8TDW7 4589 aa5.42□□□□□ -1.54
PDGFRB-205ENST00000519575 SPTSSBQ8NFR3 76 aa5.42□□□□□ -1.54
PDGFRB-205ENST00000519575 SPINK7P58062 85 aa5.41□□□□□ -1.54
PDGFRB-205ENST00000519575 LRP1Q07954 4544 aaKnown RBP5.39□□□□□ -1.55
PDGFRB-205ENST00000519575 MPLKIPQ8TAP9 179 aa5.38□□□□□ -1.55
PDGFRB-205ENST00000519575 PRR15LQ9BU68 103 aa5.35□□□□□ -1.55
PDGFRB-205ENST00000519575 COX6B2Q6YFQ2 88 aa5.34□□□□□ -1.55
PDGFRB-205ENST00000519575 KRTAP4-5Q9BYR2 181 aa5.34□□□□□ -1.55
PDGFRB-205ENST00000519575 LINC01558Q9Y6Z2 57 aa5.34□□□□□ -1.55
PDGFRB-205ENST00000519575 C4orf26Q17RF5 130 aa5.33□□□□□ -1.56
PDGFRB-205ENST00000519575 SEC61BP60468 96 aaKnown RBP5.32□□□□□ -1.56
PDGFRB-205ENST00000519575 MYCBP2O75592 4640 aa5.32□□□□□ -1.56
PDGFRB-205ENST00000519575 BIRC6Q9NR09 4857 aa5.3□□□□□ -1.56
PDGFRB-205ENST00000519575 SEC61GP60059 68 aa5.27□□□□□ -1.57
PDGFRB-205ENST00000519575 PSPHP1O15172 72 aa5.26□□□□□ -1.57
PDGFRB-205ENST00000519575 RBM12B-AS1Q9P1G2 102 aa5.26□□□□□ -1.57
PDGFRB-205ENST00000519575 HERC2O95714 4834 aa5.25□□□□□ -1.57
PDGFRB-205ENST00000519575 A0A1B0GU69 56 aa5.24□□□□□ -1.57
PDGFRB-205ENST00000519575 Q5VV11 94 aa5.22□□□□□ -1.57
PDGFRB-205ENST00000519575 ABCA13Q86UQ4 5058 aa5.21□□□□□ -1.58
PDGFRB-205ENST00000519575 A6NED7 52 aa5.19□□□□□ -1.58
PDGFRB-205ENST00000519575 BRK1Q8WUW1 75 aa5.19□□□□□ -1.58
PDGFRB-205ENST00000519575 KRTAP3-1Q9BYR8 98 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms