RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 IGHV6-1A0A0B4J1U7 121 aa12.37□□□□□ -0.43
NKX6-3-201ENST00000518699 UBL5Q9BZL1 73 aa12.37□□□□□ -0.43
NKX6-3-201ENST00000518699 C8orf87E5RJ46 101 aa12.36□□□□□ -0.43
NKX6-3-201ENST00000518699 NDUFB1O75438 58 aa12.36□□□□□ -0.43
NKX6-3-201ENST00000518699 LINC00313P59037 77 aa12.36□□□□□ -0.43
NKX6-3-201ENST00000518699 SEC61BP60468 96 aaKnown RBP12.36□□□□□ -0.43
NKX6-3-201ENST00000518699 RPL37P61927 97 aaKnown RBP12.35□□□□□ -0.43
NKX6-3-201ENST00000518699 RNF213Q63HN8 5207 aa12.34□□□□□ -0.43
NKX6-3-201ENST00000518699 IGKV3D-7A0A0C4DH55 119 aa12.33□□□□□ -0.44
NKX6-3-201ENST00000518699 BPY2O14599 106 aa12.33□□□□□ -0.44
NKX6-3-201ENST00000518699 FAM240AA0A1B0GVK7 77 aa12.32□□□□□ -0.44
NKX6-3-201ENST00000518699 NOTCH2NLQ7Z3S9 236 aa12.32□□□□□ -0.44
NKX6-3-201ENST00000518699 KRTAP16-1A8MUX0 517 aa12.31□□□□□ -0.44
NKX6-3-201ENST00000518699 Q75L30 129 aa12.31□□□□□ -0.44
NKX6-3-201ENST00000518699 ACYP1P07311 99 aa12.3□□□□□ -0.44
NKX6-3-201ENST00000518699 C20orf166-AS1Q96NR2 134 aa12.3□□□□□ -0.44
NKX6-3-201ENST00000518699 PRR15Q8IV56 129 aa12.3□□□□□ -0.44
NKX6-3-201ENST00000518699 A8MUU9 505 aa12.27□□□□□ -0.45
NKX6-3-201ENST00000518699 K7EQZ3 153 aa12.26□□□□□ -0.45
NKX6-3-201ENST00000518699 C8orf17Q9NRJ1 99 aa12.25□□□□□ -0.45
NKX6-3-201ENST00000518699 PCOTHQ58A44 107 aa12.23□□□□□ -0.45
NKX6-3-201ENST00000518699 MMP24-AS1A0A0U1RRL7 71 aa12.18□□□□□ -0.46
NKX6-3-201ENST00000518699 CXCL6P80162 114 aa12.18□□□□□ -0.46
NKX6-3-201ENST00000518699 Q8N9L7 120 aa12.17□□□□□ -0.46
NKX6-3-201ENST00000518699 ATP11AUNQ6ZP68 121 aa12.15□□□□□ -0.46
NKX6-3-201ENST00000518699 J3QR89 54 aa12.13□□□□□ -0.47
NKX6-3-201ENST00000518699 Q8N9P0 234 aaPredicted RBP12.13□□□□□ -0.47
NKX6-3-201ENST00000518699 KRTAP4-1Q9BYQ7 146 aa12.13□□□□□ -0.47
NKX6-3-201ENST00000518699 TMEM254Q8TBM7 123 aa12.12□□□□□ -0.47
NKX6-3-201ENST00000518699 MUC2Q02817 5179 aa12.11□□□□□ -0.47
NKX6-3-201ENST00000518699 ATP5EP2Q5VTU8 51 aa12.1□□□□□ -0.47
NKX6-3-201ENST00000518699 hDV103S1A0JD37 113 aa12.09□□□□□ -0.47
NKX6-3-201ENST00000518699 MRPL34Q9BQ48 92 aaKnown RBP12.08□□□□□ -0.48
NKX6-3-201ENST00000518699 CASC2Q6XLA1 102 aa12.04□□□□□ -0.48
NKX6-3-201ENST00000518699 LINC00643Q86TS7 51 aa12.04□□□□□ -0.48
NKX6-3-201ENST00000518699 HCG22E2RYF7 251 aa12.02□□□□□ -0.49
NKX6-3-201ENST00000518699 WFDC13Q8IUB5 93 aa12.02□□□□□ -0.49
NKX6-3-201ENST00000518699 ZCCHC13Q8WW36 166 aaKnown RBP11.98□□□□□ -0.49
NKX6-3-201ENST00000518699 K7ERU9 68 aa11.94□□□□□ -0.5
NKX6-3-201ENST00000518699 A0A0U1RQV1 116 aa11.93□□□□□ -0.5
NKX6-3-201ENST00000518699 NDUFS5O43920 106 aa11.92□□□□□ -0.5
NKX6-3-201ENST00000518699 HIST1H4AP62805 103 aaKnown RBP11.88□□□□□ -0.51
NKX6-3-201ENST00000518699 FAT4Q6V0I7 4981 aa11.81□□□□□ -0.52
NKX6-3-201ENST00000518699 KRTAP19-2Q3LHN2 52 aa11.8□□□□□ -0.52
NKX6-3-201ENST00000518699 A0A087WVE0 104 aa11.79□□□□□ -0.52
NKX6-3-201ENST00000518699 Q5W150 140 aa11.77□□□□□ -0.53
NKX6-3-201ENST00000518699 TP53AIP1Q9HCN2 124 aa11.77□□□□□ -0.53
NKX6-3-201ENST00000518699 SPINK7P58062 85 aa11.75□□□□□ -0.53
NKX6-3-201ENST00000518699 LCE2CQ5TA81 110 aa11.72□□□□□ -0.53
NKX6-3-201ENST00000518699 HRES1P13985 223 aa11.71□□□□□ -0.53
NKX6-3-201ENST00000518699 MPLKIPQ8TAP9 179 aa11.67□□□□□ -0.54
NKX6-3-201ENST00000518699 IMUPQ9GZP8 106 aa11.67□□□□□ -0.54
NKX6-3-201ENST00000518699 MT-ATP8P03928 68 aa11.66□□□□□ -0.54
NKX6-3-201ENST00000518699 COX6B2Q6YFQ2 88 aa11.64□□□□□ -0.55
NKX6-3-201ENST00000518699 C7orf65Q6ZTY9 151 aa11.64□□□□□ -0.55
NKX6-3-201ENST00000518699 LCE2AQ5TA79 106 aaPredicted RBP11.63□□□□□ -0.55
NKX6-3-201ENST00000518699 IGKV2D-30A0A075B6S6 120 aa11.61□□□□□ -0.55
NKX6-3-201ENST00000518699 IGKV2-30P06310 120 aa11.61□□□□□ -0.55
NKX6-3-201ENST00000518699 RBM12B-AS1Q9P1G2 102 aa11.6□□□□□ -0.55
NKX6-3-201ENST00000518699 TRAV22A0A0B4J277 110 aa11.58□□□□□ -0.56
NKX6-3-201ENST00000518699 UQCRQO14949 82 aa11.58□□□□□ -0.56
NKX6-3-201ENST00000518699 MT1HP80294 61 aa11.54□□□□□ -0.56
NKX6-3-201ENST00000518699 OCR1Q9BZK8 76 aa11.54□□□□□ -0.56
NKX6-3-201ENST00000518699 FAM236DA0A1B0GTK5 79 aa11.52□□□□□ -0.57
NKX6-3-201ENST00000518699 FAM236CP0DP71 79 aa11.52□□□□□ -0.57
NKX6-3-201ENST00000518699 FLGP20930 4061 aaPredicted RBP11.49□□□□□ -0.57
NKX6-3-201ENST00000518699 H0Y9P7 68 aa11.47□□□□□ -0.57
NKX6-3-201ENST00000518699 ATOX1O00244 68 aa11.47□□□□□ -0.57
NKX6-3-201ENST00000518699 SCGB1A1P11684 91 aa11.46□□□□□ -0.57
NKX6-3-201ENST00000518699 LOC101927531A0A1B0GV80 90 aa11.45□□□□□ -0.58
NKX6-3-201ENST00000518699 FAM236AA0A1B0GUQ0 79 aa11.43□□□□□ -0.58
NKX6-3-201ENST00000518699 FAM236BA0A1B0GV22 79 aa11.43□□□□□ -0.58
NKX6-3-201ENST00000518699 CYP4F30PQ9H0H9 118 aa11.41□□□□□ -0.58
NKX6-3-201ENST00000518699 MP68P56378 58 aa11.37□□□□□ -0.59
NKX6-3-201ENST00000518699 C5orf47Q569G3 176 aa11.37□□□□□ -0.59
NKX6-3-201ENST00000518699 C4orf26Q17RF5 130 aa11.35□□□□□ -0.59
NKX6-3-201ENST00000518699 SMIM20Q8N5G0 67 aa11.34□□□□□ -0.59
NKX6-3-201ENST00000518699 C1orf64Q8NEQ6 169 aa11.33□□□□□ -0.6
NKX6-3-201ENST00000518699 LINC00208Q96KT6 92 aa11.32□□□□□ -0.6
NKX6-3-201ENST00000518699 M0R2T5 61 aa11.31□□□□□ -0.6
NKX6-3-201ENST00000518699 H3BPC8 53 aa11.3□□□□□ -0.6
NKX6-3-201ENST00000518699 TRAV7A0A075B6U4 112 aa11.28□□□□□ -0.6
NKX6-3-201ENST00000518699 H1FX-AS1Q4G0G2 97 aa11.27□□□□□ -0.61
NKX6-3-201ENST00000518699 KRTAP10-6P60371 365 aaPredicted RBP11.22□□□□□ -0.61
NKX6-3-201ENST00000518699 KRTAP3-1Q9BYR8 98 aa11.21□□□□□ -0.61
NKX6-3-201ENST00000518699 LORP23490 312 aaPredicted RBP11.2□□□□□ -0.62
NKX6-3-201ENST00000518699 KLKP1Q107X0 134 aa11.18□□□□□ -0.62
NKX6-3-201ENST00000518699 SERP2Q8N6R1 65 aa11.12□□□□□ -0.63
NKX6-3-201ENST00000518699 A8MUN3 132 aa11.03□□□□□ -0.64
NKX6-3-201ENST00000518699 S4R3F8 94 aa11.03□□□□□ -0.64
NKX6-3-201ENST00000518699 KRTAP9-8Q9BYQ0 159 aa11□□□□□ -0.65
NKX6-3-201ENST00000518699 C20orf197Q8N268 126 aa10.97□□□□□ -0.65
NKX6-3-201ENST00000518699 SNURFQ9Y675 71 aa10.97□□□□□ -0.65
NKX6-3-201ENST00000518699 LCA10Q71F78 164 aa10.96□□□□□ -0.65
NKX6-3-201ENST00000518699 COX7CP15954 63 aa10.93□□□□□ -0.66
NKX6-3-201ENST00000518699 DMAC1Q96GE9 116 aa10.92□□□□□ -0.66
NKX6-3-201ENST00000518699 MT2AP02795 61 aa10.9□□□□□ -0.66
NKX6-3-201ENST00000518699 KRTAP3-3Q9BYR6 98 aa10.87□□□□□ -0.67
NKX6-3-201ENST00000518699 CSAG1Q6PB30 78 aa10.86□□□□□ -0.67
NKX6-3-201ENST00000518699 ANAPC13Q9BS18 74 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms