RNA–Protein interactions for RNA: ENST00000518209.1

CDH12-204, Transcript of cadherin 12, humanhuman

TSL 3

Gene CDH12, Length 666 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-204ENST00000518209 ATMQ13315 3056 aa0.86□□□□□ -2.27
CDH12-204ENST00000518209 GVINP1Q7Z2Y8 2422 aa0.86□□□□□ -2.27
CDH12-204ENST00000518209 ABCA2Q9BZC7 2435 aa0.86□□□□□ -2.27
CDH12-204ENST00000518209 ABCA12Q86UK0 2595 aa0.86□□□□□ -2.27
CDH12-204ENST00000518209 CEP350Q5VT06 3117 aa0.86□□□□□ -2.27
CDH12-204ENST00000518209 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
CDH12-204ENST00000518209 ANK3Q12955 4377 aaKnown RBP0.86□□□□□ -2.27
CDH12-204ENST00000518209 HECTD4Q9Y4D8 3996 aa0.86□□□□□ -2.27
CDH12-204ENST00000518209 TRIOO75962 3097 aa0.86□□□□□ -2.27
CDH12-204ENST00000518209 M0QZ58 72 aa0.85□□□□□ -2.27
CDH12-204ENST00000518209 LAMA5O15230 3695 aa0.85□□□□□ -2.27
CDH12-204ENST00000518209 SPTBN5Q9NRC6 3674 aaKnown RBP0.85□□□□□ -2.27
CDH12-204ENST00000518209 FRAS1Q86XX4 4008 aa0.85□□□□□ -2.27
CDH12-204ENST00000518209 CELSR3Q9NYQ7 3312 aa0.85□□□□□ -2.27
CDH12-204ENST00000518209 C5orf42Q9H799 3197 aa0.85□□□□□ -2.27
CDH12-204ENST00000518209 MUC3AQ02505 3323 aa0.84□□□□□ -2.27
CDH12-204ENST00000518209 DNAH10Q8IVF4 4471 aa0.84□□□□□ -2.27
CDH12-204ENST00000518209 WNK1Q9H4A3 2382 aa0.84□□□□□ -2.27
CDH12-204ENST00000518209 DNAH7Q8WXX0 4024 aa0.84□□□□□ -2.27
CDH12-204ENST00000518209 MKI67P46013 3256 aaKnown RBP0.84□□□□□ -2.27
CDH12-204ENST00000518209 DEFB104AQ8WTQ1 72 aa0.84□□□□□ -2.27
CDH12-204ENST00000518209 NF1P21359 2839 aa0.84□□□□□ -2.28
CDH12-204ENST00000518209 CHD6Q8TD26 2715 aa0.84□□□□□ -2.28
CDH12-204ENST00000518209 PKD1P98161 4303 aa0.84□□□□□ -2.28
CDH12-204ENST00000518209 ZZEF1O43149 2961 aa0.83□□□□□ -2.28
CDH12-204ENST00000518209 SPINK6Q6UWN8 80 aa0.83□□□□□ -2.28
CDH12-204ENST00000518209 COL12A1Q99715 3063 aa0.83□□□□□ -2.28
CDH12-204ENST00000518209 AKAP6Q13023 2319 aa0.83□□□□□ -2.28
CDH12-204ENST00000518209 DMXL2Q8TDJ6 3036 aa0.83□□□□□ -2.28
CDH12-204ENST00000518209 PRUNE2Q8WUY3 3088 aa0.83□□□□□ -2.28
CDH12-204ENST00000518209 TACC2O95359 2948 aa0.82□□□□□ -2.28
CDH12-204ENST00000518209 ZNF469Q96JG9 3925 aaPredicted RBP0.82□□□□□ -2.28
CDH12-204ENST00000518209 BOD1L1Q8NFC6 3051 aa0.82□□□□□ -2.28
CDH12-204ENST00000518209 KRTAP2-3P0C7H8 128 aa0.82□□□□□ -2.28
CDH12-204ENST00000518209 KRTAP19-3Q7Z4W3 81 aa0.82□□□□□ -2.28
CDH12-204ENST00000518209 KRTAP2-4Q9BYR9 128 aa0.82□□□□□ -2.28
CDH12-204ENST00000518209 KRTAP2-1Q9BYU5 128 aa0.82□□□□□ -2.28
CDH12-204ENST00000518209 FAT3Q8TDW7 4589 aa0.82□□□□□ -2.28
CDH12-204ENST00000518209 DNAH1Q9P2D7 4330 aa0.82□□□□□ -2.28
CDH12-204ENST00000518209 HUWE1Q7Z6Z7 4374 aaKnown RBP0.82□□□□□ -2.28
CDH12-204ENST00000518209 CEP290O15078 2479 aa0.81□□□□□ -2.28
CDH12-204ENST00000518209 DNAH12Q6ZR08 3092 aa0.81□□□□□ -2.28
CDH12-204ENST00000518209 ATRQ13535 2644 aa0.81□□□□□ -2.28
CDH12-204ENST00000518209 HECTD1Q9ULT8 2610 aa0.81□□□□□ -2.28
CDH12-204ENST00000518209 DEFB108AA8MXU0 73 aa0.81□□□□□ -2.28
CDH12-204ENST00000518209 SPINK1P00995 79 aa0.81□□□□□ -2.28
CDH12-204ENST00000518209 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
CDH12-204ENST00000518209 BDP1A6H8Y1 2624 aa0.8□□□□□ -2.28
CDH12-204ENST00000518209 DMDP11532 3685 aa0.8□□□□□ -2.28
CDH12-204ENST00000518209 HTTP42858 3142 aa0.8□□□□□ -2.28
CDH12-204ENST00000518209 EP300Q09472 2414 aaPredicted RBP0.8□□□□□ -2.28
CDH12-204ENST00000518209 PKD1L2Q7Z442 2459 aa0.8□□□□□ -2.28
CDH12-204ENST00000518209 LRBAP50851 2863 aa0.8□□□□□ -2.28
CDH12-204ENST00000518209 SETD2Q9BYW2 2564 aaPredicted RBP0.79□□□□□ -2.28
CDH12-204ENST00000518209 DNAH6Q9C0G6 4158 aa0.79□□□□□ -2.28
CDH12-204ENST00000518209 FLGP20930 4061 aaPredicted RBP0.79□□□□□ -2.28
CDH12-204ENST00000518209 TNXBP22105 4242 aa0.79□□□□□ -2.28
CDH12-204ENST00000518209 COL6A5A8TX70 2615 aa0.79□□□□□ -2.28
CDH12-204ENST00000518209 TENM3Q9P273 2699 aa0.79□□□□□ -2.28
CDH12-204ENST00000518209 DCHS1Q96JQ0 3298 aa0.79□□□□□ -2.28
CDH12-204ENST00000518209 DNAH9Q9NYC9 4486 aa0.79□□□□□ -2.28
CDH12-204ENST00000518209 SPTA1P02549 2419 aa0.78□□□□□ -2.28
CDH12-204ENST00000518209 ITPR3Q14573 2671 aa0.78□□□□□ -2.28
CDH12-204ENST00000518209 H3BUX3 64 aa0.78□□□□□ -2.28
CDH12-204ENST00000518209 SMR3AQ99954 134 aa0.78□□□□□ -2.28
CDH12-204ENST00000518209 TRRAPQ9Y4A5 3859 aa0.78□□□□□ -2.28
CDH12-204ENST00000518209 APOBP04114 4563 aaKnown RBP0.78□□□□□ -2.28
CDH12-204ENST00000518209 SPTBN4Q9H254 2564 aa0.78□□□□□ -2.28
CDH12-204ENST00000518209 LRP1Q07954 4544 aaKnown RBP0.77□□□□□ -2.29
CDH12-204ENST00000518209 DMXL1Q9Y485 3027 aa0.77□□□□□ -2.29
CDH12-204ENST00000518209 XIRP2A4UGR9 3374 aa0.77□□□□□ -2.29
CDH12-204ENST00000518209 ACACAQ13085 2346 aa0.77□□□□□ -2.29
CDH12-204ENST00000518209 PIEZO1Q92508 2521 aa0.77□□□□□ -2.29
CDH12-204ENST00000518209 FLNCQ14315 2725 aa0.77□□□□□ -2.29
CDH12-204ENST00000518209 KALRNO60229 2985 aa0.77□□□□□ -2.29
CDH12-204ENST00000518209 NAV2Q8IVL1 2488 aa0.76□□□□□ -2.29
CDH12-204ENST00000518209 CSMD1Q96PZ7 3565 aa0.76□□□□□ -2.29
CDH12-204ENST00000518209 SRCAPQ6ZRS2 3230 aa0.76□□□□□ -2.29
CDH12-204ENST00000518209 CFAP47Q6ZTR5 3102 aa0.75□□□□□ -2.29
CDH12-204ENST00000518209 CMYA5Q8N3K9 4069 aa0.75□□□□□ -2.29
CDH12-204ENST00000518209 NOTCH1P46531 2555 aa0.75□□□□□ -2.29
CDH12-204ENST00000518209 NCOR1O75376 2440 aa0.75□□□□□ -2.29
CDH12-204ENST00000518209 LOC400499M0QZD8 3231 aa0.75□□□□□ -2.29
CDH12-204ENST00000518209 USP24Q9UPU5 2620 aa0.75□□□□□ -2.29
CDH12-204ENST00000518209 GOLGB1Q14789 3259 aaKnown RBP0.75□□□□□ -2.29
CDH12-204ENST00000518209 FREM2Q5SZK8 3169 aa0.75□□□□□ -2.29
CDH12-204ENST00000518209 COL7A1Q02388 2944 aa0.75□□□□□ -2.29
CDH12-204ENST00000518209 WDR87Q6ZQQ6 2873 aa0.75□□□□□ -2.29
CDH12-204ENST00000518209 DNAH17Q9UFH2 4485 aa0.74□□□□□ -2.29
CDH12-204ENST00000518209 SPEGQ15772 3267 aa0.74□□□□□ -2.29
CDH12-204ENST00000518209 VPS13AQ96RL7 3174 aa0.74□□□□□ -2.29
CDH12-204ENST00000518209 PKHD1P08F94 4074 aa0.74□□□□□ -2.29
CDH12-204ENST00000518209 PKD1L1Q8TDX9 2849 aa0.74□□□□□ -2.29
CDH12-204ENST00000518209 DEFB135Q30KP9 77 aa0.74□□□□□ -2.29
CDH12-204ENST00000518209 NSD1Q96L73 2696 aaPredicted RBP0.74□□□□□ -2.29
CDH12-204ENST00000518209 CUBNO60494 3623 aa0.74□□□□□ -2.29
CDH12-204ENST00000518209 UTRNP46939 3433 aa0.74□□□□□ -2.29
CDH12-204ENST00000518209 WDFY4Q6ZS81 3184 aa0.73□□□□□ -2.29
CDH12-204ENST00000518209 C9orf92A6NGG3 77 aa0.73□□□□□ -2.29
CDH12-204ENST00000518209 M0R2T5 61 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms