RNA–Protein interactions for RNA: ENST00000518209.1

CDH12-204, Transcript of cadherin 12, humanhuman

TSL 3

Gene CDH12, Length 666 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-204ENST00000518209 AEBP2Q6ZN18 517 aaPredicted RBP24.09■■□□□ 1.45
CDH12-204ENST00000518209 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
CDH12-204ENST00000518209 SENP3Q9H4L4 574 aaPredicted RBP20.81■□□□□ 0.92
CDH12-204ENST00000518209 PHF23Q9BUL5 403 aaPredicted RBP20.37■□□□□ 0.85
CDH12-204ENST00000518209 FOXD1Q16676 465 aa19.41■□□□□ 0.7
CDH12-204ENST00000518209 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
CDH12-204ENST00000518209 MSH5O43196 834 aa18.56■□□□□ 0.56
CDH12-204ENST00000518209 PIAS4Q8N2W9 510 aaPredicted RBP17.98■□□□□ 0.47
CDH12-204ENST00000518209 PPP6R1Q9UPN7 881 aa17.5■□□□□ 0.39
CDH12-204ENST00000518209 PLPPR3Q6T4P5 718 aa17.44■□□□□ 0.38
CDH12-204ENST00000518209 ADRA2BP18089 450 aa17.41■□□□□ 0.38
CDH12-204ENST00000518209 CACNB1Q02641 598 aaPredicted RBP16.37■□□□□ 0.21
CDH12-204ENST00000518209 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
CDH12-204ENST00000518209 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
CDH12-204ENST00000518209 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
CDH12-204ENST00000518209 DCAF8L1A6NGE4 600 aa15.71■□□□□ 0.11
CDH12-204ENST00000518209 RNF39Q9H2S5 420 aa15.71■□□□□ 0.11
CDH12-204ENST00000518209 C1QBPQ07021 282 aaKnown RBP15.49■□□□□ 0.07
CDH12-204ENST00000518209 HOXD11P31277 338 aaPredicted RBP15.44■□□□□ 0.06
CDH12-204ENST00000518209 PPP4R3CPQ6ZMV5 832 aa15.14■□□□□ 0.01
CDH12-204ENST00000518209 RNF216Q9NWF9 866 aaPredicted RBP15.14■□□□□ 0.01
CDH12-204ENST00000518209 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
CDH12-204ENST00000518209 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
CDH12-204ENST00000518209 POTEHQ6S545 545 aa15.04■□□□□ -0
CDH12-204ENST00000518209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.05
CDH12-204ENST00000518209 DSG3P32926 999 aa14.44□□□□□ -0.1
CDH12-204ENST00000518209 NCBP3Q53F19 620 aaKnown RBP14.41□□□□□ -0.1
CDH12-204ENST00000518209 CAPN15O75808 1086 aa14.35□□□□□ -0.11
CDH12-204ENST00000518209 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
CDH12-204ENST00000518209 U3KPZ7 1027 aaPredicted RBP14.27□□□□□ -0.13
CDH12-204ENST00000518209 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
CDH12-204ENST00000518209 APLP2Q06481 763 aa13.96□□□□□ -0.17
CDH12-204ENST00000518209 ZNF219Q9P2Y4 722 aaPredicted RBP13.94□□□□□ -0.18
CDH12-204ENST00000518209 TRHP20396 242 aaPredicted RBP13.92□□□□□ -0.18
CDH12-204ENST00000518209 ABCB7O75027 752 aa13.9□□□□□ -0.18
CDH12-204ENST00000518209 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
CDH12-204ENST00000518209 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
CDH12-204ENST00000518209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.74□□□□□ -0.21
CDH12-204ENST00000518209 HNRNPUL2Q1KMD3 747 aaKnown RBP13.74□□□□□ -0.21
CDH12-204ENST00000518209 SP7Q8TDD2 431 aaPredicted RBP13.74□□□□□ -0.21
CDH12-204ENST00000518209 KCNA4P22459 653 aa13.65□□□□□ -0.22
CDH12-204ENST00000518209 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
CDH12-204ENST00000518209 SAMD1Q6SPF0 538 aaPredicted RBP13.59□□□□□ -0.23
CDH12-204ENST00000518209 POLA2Q14181 598 aa13.37□□□□□ -0.27
CDH12-204ENST00000518209 AKT1S1Q96B36 256 aa13.37□□□□□ -0.27
CDH12-204ENST00000518209 HAX1O00165 279 aa13.32□□□□□ -0.28
CDH12-204ENST00000518209 PIP4P2Q8N4L2 257 aa13.3□□□□□ -0.28
CDH12-204ENST00000518209 REM2Q8IYK8 340 aaPredicted RBP13.21□□□□□ -0.29
CDH12-204ENST00000518209 ZBTB12Q9Y330 459 aaPredicted RBP13.15□□□□□ -0.3
CDH12-204ENST00000518209 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDH12-204ENST00000518209 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
CDH12-204ENST00000518209 PITPNM1O00562 1244 aa13.05□□□□□ -0.32
CDH12-204ENST00000518209 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
CDH12-204ENST00000518209 EVX2Q03828 476 aa12.98□□□□□ -0.33
CDH12-204ENST00000518209 OSCARQ8IYS5 282 aa12.95□□□□□ -0.34
CDH12-204ENST00000518209 LHX8Q68G74 356 aa12.88□□□□□ -0.35
CDH12-204ENST00000518209 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
CDH12-204ENST00000518209 PRKAR2AP13861 404 aaKnown RBP12.73□□□□□ -0.37
CDH12-204ENST00000518209 C19orf67A6NJJ6 358 aa12.72□□□□□ -0.37
CDH12-204ENST00000518209 GABBR2O75899 941 aa12.72□□□□□ -0.37
CDH12-204ENST00000518209 PLSCR2Q9NRY7 297 aa12.69□□□□□ -0.38
CDH12-204ENST00000518209 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
CDH12-204ENST00000518209 SPDYE2BA6NHP3 402 aa12.63□□□□□ -0.39
CDH12-204ENST00000518209 SPDYE6P0CI01 402 aa12.63□□□□□ -0.39
CDH12-204ENST00000518209 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
CDH12-204ENST00000518209 SPDYE1Q8NFV5 336 aaPredicted RBP12.61□□□□□ -0.39
CDH12-204ENST00000518209 CLEC11AQ9Y240 323 aa12.58□□□□□ -0.4
CDH12-204ENST00000518209 ZBTB22O15209 634 aa12.52□□□□□ -0.41
CDH12-204ENST00000518209 FBLN2P98095 1184 aa12.46□□□□□ -0.41
CDH12-204ENST00000518209 CLCN6P51797 869 aa12.4□□□□□ -0.42
CDH12-204ENST00000518209 POTEIP0CG38 1075 aa12.39□□□□□ -0.43
CDH12-204ENST00000518209 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
CDH12-204ENST00000518209 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
CDH12-204ENST00000518209 ZNF692Q9BU19 519 aaPredicted RBP12.33□□□□□ -0.44
CDH12-204ENST00000518209 CSRNP3Q8WYN3 585 aa12.32□□□□□ -0.44
CDH12-204ENST00000518209 SSUH2Q9Y2M2 353 aa12.32□□□□□ -0.44
CDH12-204ENST00000518209 PRR29P0C7W0 189 aa12.29□□□□□ -0.44
CDH12-204ENST00000518209 CD44P16070 742 aaKnown RBP12.29□□□□□ -0.44
CDH12-204ENST00000518209 ATXN8OSP0DMR3 200 aa12.28□□□□□ -0.44
CDH12-204ENST00000518209 DCBLD2Q96PD2 775 aa12.27□□□□□ -0.45
CDH12-204ENST00000518209 POTEMA6NI47 508 aa12.16□□□□□ -0.46
CDH12-204ENST00000518209 FARP1Q9Y4F1 1045 aaPredicted RBP12.16□□□□□ -0.46
CDH12-204ENST00000518209 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
CDH12-204ENST00000518209 OTUD5Q96G74 571 aa12.12□□□□□ -0.47
CDH12-204ENST00000518209 PCDH10Q9P2E7 1040 aa12.11□□□□□ -0.47
CDH12-204ENST00000518209 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDH12-204ENST00000518209 POTEGQ6S5H5 508 aa12.09□□□□□ -0.47
CDH12-204ENST00000518209 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
CDH12-204ENST00000518209 ZRANB1Q9UGI0 708 aa11.99□□□□□ -0.49
CDH12-204ENST00000518209 POTEB2H3BUK9 544 aa11.96□□□□□ -0.49
CDH12-204ENST00000518209 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
CDH12-204ENST00000518209 PAK3O75914 559 aaPredicted RBP11.8□□□□□ -0.52
CDH12-204ENST00000518209 MAMSTRQ6ZN01 415 aa11.79□□□□□ -0.52
CDH12-204ENST00000518209 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
CDH12-204ENST00000518209 CREBZFQ9NS37 354 aa11.73□□□□□ -0.53
CDH12-204ENST00000518209 C7P10643 843 aa11.72□□□□□ -0.53
CDH12-204ENST00000518209 METRNQ9UJH8 293 aa11.72□□□□□ -0.53
CDH12-204ENST00000518209 SLC39A7Q92504 469 aa11.71□□□□□ -0.53
CDH12-204ENST00000518209 PHF12Q96QT6 1004 aa11.71□□□□□ -0.53
CDH12-204ENST00000518209 FAM163AQ96GL9 167 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms