RNA–Protein interactions for RNA: ENST00000518026.5

MSR1-207, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 4

Gene MSR1, Length 530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-207ENST00000518026 KRTAP2-1Q9BYU5 128 aa0.91□□□□□ -2.26
MSR1-207ENST00000518026 TNRC18O15417 2968 aaPredicted RBP0.91□□□□□ -2.26
MSR1-207ENST00000518026 ATRQ13535 2644 aa0.91□□□□□ -2.26
MSR1-207ENST00000518026 SPTA1P02549 2419 aa0.9□□□□□ -2.26
MSR1-207ENST00000518026 CHD6Q8TD26 2715 aa0.9□□□□□ -2.26
MSR1-207ENST00000518026 FBN2P35556 2912 aa0.9□□□□□ -2.26
MSR1-207ENST00000518026 ACACAQ13085 2346 aa0.89□□□□□ -2.27
MSR1-207ENST00000518026 HECTD1Q9ULT8 2610 aa0.89□□□□□ -2.27
MSR1-207ENST00000518026 NAV2Q8IVL1 2488 aa0.89□□□□□ -2.27
MSR1-207ENST00000518026 CCDC168Q8NDH2 2452 aa0.89□□□□□ -2.27
MSR1-207ENST00000518026 LINC01556Q5JQF7 62 aa0.89□□□□□ -2.27
MSR1-207ENST00000518026 CRYBG3Q68DQ2 2970 aa0.88□□□□□ -2.27
MSR1-207ENST00000518026 DEFB133Q30KQ1 61 aa0.88□□□□□ -2.27
MSR1-207ENST00000518026 FBN3Q75N90 2809 aa0.88□□□□□ -2.27
MSR1-207ENST00000518026 HELZ2Q9BYK8 2649 aaKnown RBP0.87□□□□□ -2.27
MSR1-207ENST00000518026 NCOR1O75376 2440 aa0.86□□□□□ -2.27
MSR1-207ENST00000518026 HTN3P15516 51 aa0.86□□□□□ -2.27
MSR1-207ENST00000518026 U3KQA8 63 aa0.86□□□□□ -2.27
MSR1-207ENST00000518026 ITPR3Q14573 2671 aa0.86□□□□□ -2.27
MSR1-207ENST00000518026 FRYQ5TBA9 3013 aa0.85□□□□□ -2.27
MSR1-207ENST00000518026 SETD2Q9BYW2 2564 aaPredicted RBP0.84□□□□□ -2.27
MSR1-207ENST00000518026 CSMD3Q7Z407 3707 aa0.84□□□□□ -2.28
MSR1-207ENST00000518026 CREBBPQ92793 2442 aa0.84□□□□□ -2.28
MSR1-207ENST00000518026 BDP1A6H8Y1 2624 aa0.84□□□□□ -2.28
MSR1-207ENST00000518026 USP24Q9UPU5 2620 aa0.84□□□□□ -2.28
MSR1-207ENST00000518026 NF1P21359 2839 aa0.82□□□□□ -2.28
MSR1-207ENST00000518026 APCP25054 2843 aa0.82□□□□□ -2.28
MSR1-207ENST00000518026 PRM1P04553 51 aa0.82□□□□□ -2.28
MSR1-207ENST00000518026 RPS29P62273 56 aaKnown RBP0.82□□□□□ -2.28
MSR1-207ENST00000518026 APC2O95996 2303 aa0.82□□□□□ -2.28
MSR1-207ENST00000518026 USP9YO00507 2555 aaPredicted RBP0.82□□□□□ -2.28
MSR1-207ENST00000518026 GCN1Q92616 2671 aaKnown RBP0.82□□□□□ -2.28
MSR1-207ENST00000518026 PIEZO1Q92508 2521 aa0.81□□□□□ -2.28
MSR1-207ENST00000518026 DMBT1Q9UGM3 2413 aaPredicted RBP0.81□□□□□ -2.28
MSR1-207ENST00000518026 FLNCQ14315 2725 aa0.8□□□□□ -2.28
MSR1-207ENST00000518026 DCHS2Q6V1P9 2916 aa0.79□□□□□ -2.28
MSR1-207ENST00000518026 NBASA2RRP1 2371 aa0.79□□□□□ -2.28
MSR1-207ENST00000518026 ZZEF1O43149 2961 aa0.78□□□□□ -2.28
MSR1-207ENST00000518026 WDR87Q6ZQQ6 2873 aa0.78□□□□□ -2.28
MSR1-207ENST00000518026 DEFB4AO15263 64 aa0.78□□□□□ -2.28
MSR1-207ENST00000518026 KRTAP19-3Q7Z4W3 81 aa0.78□□□□□ -2.28
MSR1-207ENST00000518026 KRTAP8-1Q8IUC2 63 aa0.78□□□□□ -2.28
MSR1-207ENST00000518026 HIVEP3Q5T1R4 2406 aa0.78□□□□□ -2.28
MSR1-207ENST00000518026 ZFHX4Q86UP3 3567 aa0.78□□□□□ -2.28
MSR1-207ENST00000518026 PKD1L1Q8TDX9 2849 aa0.78□□□□□ -2.29
MSR1-207ENST00000518026 TACC2O95359 2948 aa0.78□□□□□ -2.29
MSR1-207ENST00000518026 TNXBP22105 4242 aa0.77□□□□□ -2.29
MSR1-207ENST00000518026 CHD8Q9HCK8 2581 aa0.77□□□□□ -2.29
MSR1-207ENST00000518026 RANBP2P49792 3224 aaKnown RBP0.76□□□□□ -2.29
MSR1-207ENST00000518026 CACNA1AO00555 2505 aa0.76□□□□□ -2.29
MSR1-207ENST00000518026 COL7A1Q02388 2944 aa0.76□□□□□ -2.29
MSR1-207ENST00000518026 CFAP54Q96N23 3096 aa0.75□□□□□ -2.29
MSR1-207ENST00000518026 CELSR3Q9NYQ7 3312 aa0.75□□□□□ -2.29
MSR1-207ENST00000518026 NSD1Q96L73 2696 aaPredicted RBP0.75□□□□□ -2.29
MSR1-207ENST00000518026 STAB1Q9NY15 2570 aa0.75□□□□□ -2.29
MSR1-207ENST00000518026 NBPF19A0A087WUL8 3843 aa0.75□□□□□ -2.29
MSR1-207ENST00000518026 LYSTQ99698 3801 aa0.75□□□□□ -2.29
MSR1-207ENST00000518026 COL12A1Q99715 3063 aa0.75□□□□□ -2.29
MSR1-207ENST00000518026 VPS13DQ5THJ4 4388 aa0.75□□□□□ -2.29
MSR1-207ENST00000518026 DMXL1Q9Y485 3027 aa0.75□□□□□ -2.29
MSR1-207ENST00000518026 SPENQ96T58 3664 aaKnown RBP0.75□□□□□ -2.29
MSR1-207ENST00000518026 RELNP78509 3460 aa0.74□□□□□ -2.29
MSR1-207ENST00000518026 NOTCH1P46531 2555 aa0.74□□□□□ -2.29
MSR1-207ENST00000518026 MAP1BP46821 2468 aaKnown RBP0.74□□□□□ -2.29
MSR1-207ENST00000518026 ACANP16112 2415 aa0.74□□□□□ -2.29
MSR1-207ENST00000518026 SETXQ7Z333 2677 aaKnown RBP0.73□□□□□ -2.29
MSR1-207ENST00000518026 MYCBP2O75592 4640 aa0.73□□□□□ -2.29
MSR1-207ENST00000518026 ANKRD11Q6UB99 2663 aaPredicted RBP0.73□□□□□ -2.29
MSR1-207ENST00000518026 EPG5Q9HCE0 2579 aa0.73□□□□□ -2.29
MSR1-207ENST00000518026 MTORP42345 2549 aa0.73□□□□□ -2.29
MSR1-207ENST00000518026 DNAH11Q96DT5 4516 aa0.73□□□□□ -2.29
MSR1-207ENST00000518026 TENM1Q9UKZ4 2725 aa0.73□□□□□ -2.29
MSR1-207ENST00000518026 FRYLO94915 3013 aa0.72□□□□□ -2.29
MSR1-207ENST00000518026 SACSQ9NZJ4 4579 aa0.72□□□□□ -2.29
MSR1-207ENST00000518026 UNC79Q9P2D8 2635 aa0.72□□□□□ -2.29
MSR1-207ENST00000518026 KMT2AQ03164 3969 aa0.72□□□□□ -2.29
MSR1-207ENST00000518026 HIVEP1P15822 2718 aa0.72□□□□□ -2.29
MSR1-207ENST00000518026 COL6A3P12111 3177 aa0.71□□□□□ -2.3
MSR1-207ENST00000518026 NIPBLQ6KC79 2804 aaeCLIP0.71□□□□□ -2.3
MSR1-207ENST00000518026 VPS13BQ7Z7G8 4022 aa0.71□□□□□ -2.3
MSR1-207ENST00000518026 NCOR2Q9Y618 2525 aa0.71□□□□□ -2.3
MSR1-207ENST00000518026 SPRR2DP22532 72 aa0.71□□□□□ -2.3
MSR1-207ENST00000518026 LRBAP50851 2863 aa0.71□□□□□ -2.3
MSR1-207ENST00000518026 RIF1Q5UIP0 2472 aaKnown RBP0.71□□□□□ -2.3
MSR1-207ENST00000518026 BSNQ9UPA5 3926 aa0.7□□□□□ -2.3
MSR1-207ENST00000518026 LRRK2Q5S007 2527 aa0.7□□□□□ -2.3
MSR1-207ENST00000518026 NBEAQ8NFP9 2946 aa0.7□□□□□ -2.3
MSR1-207ENST00000518026 PTPN13Q12923 2485 aa0.7□□□□□ -2.3
MSR1-207ENST00000518026 NBEAL2Q6ZNJ1 2754 aa0.7□□□□□ -2.3
MSR1-207ENST00000518026 FAM186AA6NE01 2351 aa0.7□□□□□ -2.3
MSR1-207ENST00000518026 ZANQ9Y493 2812 aa0.69□□□□□ -2.3
MSR1-207ENST00000518026 ACACBO00763 2458 aa0.69□□□□□ -2.3
MSR1-207ENST00000518026 SPRR2BP35325 72 aa0.69□□□□□ -2.3
MSR1-207ENST00000518026 ANK2Q01484 3957 aa0.69□□□□□ -2.3
MSR1-207ENST00000518026 FLNBO75369 2602 aaKnown RBP0.68□□□□□ -2.3
MSR1-207ENST00000518026 ITPR1Q14643 2758 aa0.68□□□□□ -2.3
MSR1-207ENST00000518026 CEP250Q9BV73 2442 aa0.68□□□□□ -2.3
MSR1-207ENST00000518026 KALRNO60229 2985 aa0.68□□□□□ -2.3
MSR1-207ENST00000518026 UTP20O75691 2785 aaKnown RBP0.68□□□□□ -2.3
MSR1-207ENST00000518026 PRKDCP78527 4128 aaKnown RBP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms