RNA–Protein interactions for RNA: ENST00000518026.5

MSR1-207, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 4

Gene MSR1, Length 530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-207ENST00000518026 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
MSR1-207ENST00000518026 CHIC1Q5VXU3 224 aa16.78■□□□□ 0.28
MSR1-207ENST00000518026 SENP3Q9H4L4 574 aaPredicted RBP15.15■□□□□ 0.02
MSR1-207ENST00000518026 PHF23Q9BUL5 403 aaPredicted RBP15.07■□□□□ 0
MSR1-207ENST00000518026 FOXD1Q16676 465 aa14.32□□□□□ -0.12
MSR1-207ENST00000518026 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
MSR1-207ENST00000518026 PPP6R1Q9UPN7 881 aa13.35□□□□□ -0.27
MSR1-207ENST00000518026 MSH5O43196 834 aa13.27□□□□□ -0.29
MSR1-207ENST00000518026 ADRA2BP18089 450 aa13.26□□□□□ -0.29
MSR1-207ENST00000518026 PIAS4Q8N2W9 510 aaPredicted RBP13.26□□□□□ -0.29
MSR1-207ENST00000518026 PLPPR3Q6T4P5 718 aa13.25□□□□□ -0.29
MSR1-207ENST00000518026 MAPK8IP2Q13387 824 aaPredicted RBP12.29□□□□□ -0.44
MSR1-207ENST00000518026 DMRT2Q9Y5R5 561 aa12.04□□□□□ -0.48
MSR1-207ENST00000518026 SCAF1Q9H7N4 1312 aaKnown RBP11.86□□□□□ -0.51
MSR1-207ENST00000518026 PPP4R3CPQ6ZMV5 832 aa11.68□□□□□ -0.54
MSR1-207ENST00000518026 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
MSR1-207ENST00000518026 CACNB1Q02641 598 aaPredicted RBP11.61□□□□□ -0.55
MSR1-207ENST00000518026 HOXD11P31277 338 aaPredicted RBP11.53□□□□□ -0.56
MSR1-207ENST00000518026 CNKSR2Q8WXI2 1034 aa11.42□□□□□ -0.58
MSR1-207ENST00000518026 RNF39Q9H2S5 420 aa11.42□□□□□ -0.58
MSR1-207ENST00000518026 RNF216Q9NWF9 866 aaPredicted RBP11.36□□□□□ -0.59
MSR1-207ENST00000518026 C1QBPQ07021 282 aaKnown RBP11.14□□□□□ -0.63
MSR1-207ENST00000518026 NPM3O75607 178 aaKnown RBP11.04□□□□□ -0.64
MSR1-207ENST00000518026 NCBP3Q53F19 620 aaKnown RBP11.01□□□□□ -0.65
MSR1-207ENST00000518026 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
MSR1-207ENST00000518026 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.99□□□□□ -0.65
MSR1-207ENST00000518026 U3KPZ7 1027 aaPredicted RBP10.8□□□□□ -0.68
MSR1-207ENST00000518026 SPINK5Q9NQ38 1064 aaPredicted RBP10.77□□□□□ -0.69
MSR1-207ENST00000518026 KCNA4P22459 653 aa10.72□□□□□ -0.69
MSR1-207ENST00000518026 DSG3P32926 999 aa10.66□□□□□ -0.7
MSR1-207ENST00000518026 CAPN15O75808 1086 aa10.65□□□□□ -0.7
MSR1-207ENST00000518026 SLC4A2P04920 1241 aa10.64□□□□□ -0.71
MSR1-207ENST00000518026 POTEHQ6S545 545 aa10.62□□□□□ -0.71
MSR1-207ENST00000518026 ABCB7O75027 752 aa10.48□□□□□ -0.73
MSR1-207ENST00000518026 TRHP20396 242 aaPredicted RBP10.48□□□□□ -0.73
MSR1-207ENST00000518026 ZNF219Q9P2Y4 722 aaPredicted RBP10.29□□□□□ -0.76
MSR1-207ENST00000518026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.2□□□□□ -0.78
MSR1-207ENST00000518026 HNRNPUL2Q1KMD3 747 aaKnown RBP10.2□□□□□ -0.78
MSR1-207ENST00000518026 SAMD1Q6SPF0 538 aaPredicted RBP10.19□□□□□ -0.78
MSR1-207ENST00000518026 APLP2Q06481 763 aa10.18□□□□□ -0.78
MSR1-207ENST00000518026 POLA2Q14181 598 aa10.16□□□□□ -0.78
MSR1-207ENST00000518026 ATF5Q9Y2D1 282 aaPredicted RBP10.12□□□□□ -0.79
MSR1-207ENST00000518026 MYCNP04198 464 aaPredicted RBP10.09□□□□□ -0.79
MSR1-207ENST00000518026 CHRDL2Q6WN34 429 aa9.98□□□□□ -0.81
MSR1-207ENST00000518026 RBM42Q9BTD8 480 aaKnown RBP9.98□□□□□ -0.81
MSR1-207ENST00000518026 SLC4A1APQ9BWU0 796 aaKnown RBP9.98□□□□□ -0.81
MSR1-207ENST00000518026 ZBTB22O15209 634 aa9.92□□□□□ -0.82
MSR1-207ENST00000518026 FOXD4L1Q9NU39 408 aa9.92□□□□□ -0.82
MSR1-207ENST00000518026 OSCARQ8IYS5 282 aa9.84□□□□□ -0.83
MSR1-207ENST00000518026 REM2Q8IYK8 340 aaPredicted RBP9.8□□□□□ -0.84
MSR1-207ENST00000518026 AKT1S1Q96B36 256 aa9.79□□□□□ -0.84
MSR1-207ENST00000518026 PIP4P2Q8N4L2 257 aa9.75□□□□□ -0.85
MSR1-207ENST00000518026 PITPNM1O00562 1244 aa9.71□□□□□ -0.86
MSR1-207ENST00000518026 ZBTB12Q9Y330 459 aaPredicted RBP9.7□□□□□ -0.86
MSR1-207ENST00000518026 SP7Q8TDD2 431 aaPredicted RBP9.69□□□□□ -0.86
MSR1-207ENST00000518026 EVX2Q03828 476 aa9.65□□□□□ -0.86
MSR1-207ENST00000518026 FXR2P51116 673 aaKnown RBP eCLIP9.62□□□□□ -0.87
MSR1-207ENST00000518026 HAX1O00165 279 aa9.61□□□□□ -0.87
MSR1-207ENST00000518026 MKRN4PQ13434 485 aaPredicted RBP9.58□□□□□ -0.88
MSR1-207ENST00000518026 ATXN8OSP0DMR3 200 aa9.55□□□□□ -0.88
MSR1-207ENST00000518026 SPDYE2BA6NHP3 402 aa9.47□□□□□ -0.89
MSR1-207ENST00000518026 SPDYE6P0CI01 402 aa9.47□□□□□ -0.89
MSR1-207ENST00000518026 SPDYE2Q495Y8 402 aa9.47□□□□□ -0.89
MSR1-207ENST00000518026 CLEC11AQ9Y240 323 aa9.47□□□□□ -0.89
MSR1-207ENST00000518026 FBLN2P98095 1184 aa9.46□□□□□ -0.9
MSR1-207ENST00000518026 PRKAR2AP13861 404 aaKnown RBP9.44□□□□□ -0.9
MSR1-207ENST00000518026 ZNF692Q9BU19 519 aaPredicted RBP9.42□□□□□ -0.9
MSR1-207ENST00000518026 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
MSR1-207ENST00000518026 SSUH2Q9Y2M2 353 aa9.39□□□□□ -0.91
MSR1-207ENST00000518026 SPDYE1Q8NFV5 336 aaPredicted RBP9.36□□□□□ -0.91
MSR1-207ENST00000518026 C19orf67A6NJJ6 358 aa9.32□□□□□ -0.92
MSR1-207ENST00000518026 PABPN1Q86U42 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
MSR1-207ENST00000518026 GABBR2O75899 941 aa9.28□□□□□ -0.92
MSR1-207ENST00000518026 CSRNP3Q8WYN3 585 aa9.24□□□□□ -0.93
MSR1-207ENST00000518026 PRR29P0C7W0 189 aa9.23□□□□□ -0.93
MSR1-207ENST00000518026 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
MSR1-207ENST00000518026 FARP1Q9Y4F1 1045 aaPredicted RBP9.13□□□□□ -0.95
MSR1-207ENST00000518026 CD44P16070 742 aaKnown RBP9.11□□□□□ -0.95
MSR1-207ENST00000518026 LHX8Q68G74 356 aa9.11□□□□□ -0.95
MSR1-207ENST00000518026 PLSCR2Q9NRY7 297 aa9.09□□□□□ -0.95
MSR1-207ENST00000518026 EHMT2Q96KQ7 1210 aa9.03□□□□□ -0.96
MSR1-207ENST00000518026 CREBZFQ9NS37 354 aa9.03□□□□□ -0.96
MSR1-207ENST00000518026 ZRANB1Q9UGI0 708 aa8.97□□□□□ -0.97
MSR1-207ENST00000518026 SPDYE4A6NLX3 237 aa8.94□□□□□ -0.98
MSR1-207ENST00000518026 GALR2O43603 387 aaPredicted RBP8.94□□□□□ -0.98
MSR1-207ENST00000518026 ZNF579Q8NAF0 562 aaKnown RBP8.91□□□□□ -0.98
MSR1-207ENST00000518026 DCBLD2Q96PD2 775 aa8.91□□□□□ -0.98
MSR1-207ENST00000518026 PHF12Q96QT6 1004 aa8.9□□□□□ -0.98
MSR1-207ENST00000518026 POTEB2H3BUK9 544 aa8.89□□□□□ -0.99
MSR1-207ENST00000518026 MNX1P50219 401 aaPredicted RBP8.87□□□□□ -0.99
MSR1-207ENST00000518026 PELP1Q8IZL8 1130 aaKnown RBP8.85□□□□□ -0.99
MSR1-207ENST00000518026 STAG3Q9UJ98 1225 aa8.84□□□□□ -0.99
MSR1-207ENST00000518026 OTUD5Q96G74 571 aa8.81□□□□□ -1
MSR1-207ENST00000518026 CLCN6P51797 869 aa8.79□□□□□ -1
MSR1-207ENST00000518026 POTEJP0CG39 1038 aa8.74□□□□□ -1.01
MSR1-207ENST00000518026 MS4A3Q96HJ5 214 aa8.73□□□□□ -1.01
MSR1-207ENST00000518026 PAK3O75914 559 aaPredicted RBP8.71□□□□□ -1.02
MSR1-207ENST00000518026 TSPYL2Q9H2G4 693 aaPredicted RBP8.71□□□□□ -1.02
MSR1-207ENST00000518026 NPM1P06748 294 aaKnown RBP eCLIP8.7□□□□□ -1.02
MSR1-207ENST00000518026 ATMINO43313 823 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms