RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 ATP5EP2Q5VTU8 51 aa6.02□□□□□ -1.45
PABPC1-203ENST00000517921 IGKV3D-7A0A0C4DH55 119 aa6.01□□□□□ -1.45
PABPC1-203ENST00000517921 BPY2O14599 106 aa6.01□□□□□ -1.45
PABPC1-203ENST00000517921 DEFB116Q30KQ4 102 aa6.01□□□□□ -1.45
PABPC1-203ENST00000517921 C1orf195Q5TG92 126 aa6.01□□□□□ -1.45
PABPC1-203ENST00000517921 IMUPQ9GZP8 106 aa6.01□□□□□ -1.45
PABPC1-203ENST00000517921 CXCL6P80162 114 aa6□□□□□ -1.45
PABPC1-203ENST00000517921 DSCR10P59022 87 aa5.99□□□□□ -1.45
PABPC1-203ENST00000517921 J3KT08 172 aa5.98□□□□□ -1.45
PABPC1-203ENST00000517921 IGKV4-1P06312 121 aa5.98□□□□□ -1.45
PABPC1-203ENST00000517921 ANAPC13Q9BS18 74 aa5.97□□□□□ -1.45
PABPC1-203ENST00000517921 A8MWP4 228 aa5.95□□□□□ -1.46
PABPC1-203ENST00000517921 K7EQZ3 153 aa5.95□□□□□ -1.46
PABPC1-203ENST00000517921 Q8N9L7 120 aa5.95□□□□□ -1.46
PABPC1-203ENST00000517921 RETNLBQ9BQ08 111 aa5.95□□□□□ -1.46
PABPC1-203ENST00000517921 A0A1B0GVX0 72 aa5.92□□□□□ -1.46
PABPC1-203ENST00000517921 PRR15Q8IV56 129 aa5.92□□□□□ -1.46
PABPC1-203ENST00000517921 HMCN2Q8NDA2 5059 aa5.91□□□□□ -1.46
PABPC1-203ENST00000517921 A0A087WVE0 104 aa5.91□□□□□ -1.46
PABPC1-203ENST00000517921 NDUFB1O75438 58 aa5.91□□□□□ -1.46
PABPC1-203ENST00000517921 HIST1H4AP62805 103 aaKnown RBP5.91□□□□□ -1.46
PABPC1-203ENST00000517921 IGHV6-1A0A0B4J1U7 121 aa5.89□□□□□ -1.47
PABPC1-203ENST00000517921 FP248Q71RG6 208 aaPredicted RBP5.89□□□□□ -1.47
PABPC1-203ENST00000517921 MMP24-AS1A0A0U1RRL7 71 aa5.88□□□□□ -1.47
PABPC1-203ENST00000517921 NOTCH2NLQ7Z3S9 236 aa5.88□□□□□ -1.47
PABPC1-203ENST00000517921 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
PABPC1-203ENST00000517921 HCG22E2RYF7 251 aa5.86□□□□□ -1.47
PABPC1-203ENST00000517921 C8orf87E5RJ46 101 aa5.86□□□□□ -1.47
PABPC1-203ENST00000517921 FAM236AA0A1B0GUQ0 79 aa5.84□□□□□ -1.47
PABPC1-203ENST00000517921 FAM236BA0A1B0GV22 79 aa5.84□□□□□ -1.47
PABPC1-203ENST00000517921 WFDC13Q8IUB5 93 aa5.84□□□□□ -1.47
PABPC1-203ENST00000517921 IGLV7-46A0A075B6I9 117 aa5.83□□□□□ -1.48
PABPC1-203ENST00000517921 hDV103S1A0JD37 113 aa5.83□□□□□ -1.48
PABPC1-203ENST00000517921 LINC00313P59037 77 aa5.83□□□□□ -1.48
PABPC1-203ENST00000517921 PRR4Q16378 134 aa5.83□□□□□ -1.48
PABPC1-203ENST00000517921 C9orf92A6NGG3 77 aa5.82□□□□□ -1.48
PABPC1-203ENST00000517921 KRTAP16-1A8MUX0 517 aa5.82□□□□□ -1.48
PABPC1-203ENST00000517921 ATOX1O00244 68 aa5.82□□□□□ -1.48
PABPC1-203ENST00000517921 CASC2Q6XLA1 102 aa5.82□□□□□ -1.48
PABPC1-203ENST00000517921 TMEM254Q8TBM7 123 aa5.81□□□□□ -1.48
PABPC1-203ENST00000517921 CCDC179H3BU77 68 aa5.8□□□□□ -1.48
PABPC1-203ENST00000517921 UQCRQO14949 82 aa5.8□□□□□ -1.48
PABPC1-203ENST00000517921 KRTAP13-3Q3SY46 172 aa5.8□□□□□ -1.48
PABPC1-203ENST00000517921 XP32Q5T750 250 aa5.8□□□□□ -1.48
PABPC1-203ENST00000517921 MRPL34Q9BQ48 92 aaKnown RBP5.79□□□□□ -1.48
PABPC1-203ENST00000517921 LPAP08519 4548 aa5.79□□□□□ -1.48
PABPC1-203ENST00000517921 COX7CP15954 63 aa5.77□□□□□ -1.49
PABPC1-203ENST00000517921 TPRXLQ17RH7 258 aa5.77□□□□□ -1.49
PABPC1-203ENST00000517921 LRP2P98164 4655 aa5.77□□□□□ -1.49
PABPC1-203ENST00000517921 Q8N9P0 234 aaPredicted RBP5.76□□□□□ -1.49
PABPC1-203ENST00000517921 SERP2Q8N6R1 65 aa5.75□□□□□ -1.49
PABPC1-203ENST00000517921 C20orf166-AS1Q96NR2 134 aa5.74□□□□□ -1.49
PABPC1-203ENST00000517921 A8MUU9 505 aa5.73□□□□□ -1.49
PABPC1-203ENST00000517921 OCR1Q9BZK8 76 aa5.73□□□□□ -1.49
PABPC1-203ENST00000517921 NDUFS5O43920 106 aa5.72□□□□□ -1.49
PABPC1-203ENST00000517921 SMIM20Q8N5G0 67 aa5.72□□□□□ -1.49
PABPC1-203ENST00000517921 Q75L30 129 aa5.71□□□□□ -1.5
PABPC1-203ENST00000517921 TRAV7A0A075B6U4 112 aa5.69□□□□□ -1.5
PABPC1-203ENST00000517921 TP53AIP1Q9HCN2 124 aa5.69□□□□□ -1.5
PABPC1-203ENST00000517921 RPL37P61927 97 aaKnown RBP5.68□□□□□ -1.5
PABPC1-203ENST00000517921 Q5W150 140 aa5.66□□□□□ -1.5
PABPC1-203ENST00000517921 RNF213Q63HN8 5207 aa5.66□□□□□ -1.5
PABPC1-203ENST00000517921 TMEM258P61165 79 aa5.65□□□□□ -1.5
PABPC1-203ENST00000517921 ZCCHC13Q8WW36 166 aaKnown RBP5.65□□□□□ -1.5
PABPC1-203ENST00000517921 TRAV22A0A0B4J277 110 aa5.64□□□□□ -1.51
PABPC1-203ENST00000517921 RPS28P62857 69 aaKnown RBP5.63□□□□□ -1.51
PABPC1-203ENST00000517921 MUC17Q685J3 4493 aa5.62□□□□□ -1.51
PABPC1-203ENST00000517921 H0Y9P7 68 aa5.62□□□□□ -1.51
PABPC1-203ENST00000517921 C5orf47Q569G3 176 aa5.61□□□□□ -1.51
PABPC1-203ENST00000517921 ATP11AUNQ6ZP68 121 aa5.6□□□□□ -1.51
PABPC1-203ENST00000517921 MP68P56378 58 aa5.59□□□□□ -1.51
PABPC1-203ENST00000517921 KLKP1Q107X0 134 aa5.58□□□□□ -1.52
PABPC1-203ENST00000517921 PCOTHQ58A44 107 aa5.58□□□□□ -1.52
PABPC1-203ENST00000517921 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
PABPC1-203ENST00000517921 A0A0U1RQV1 116 aa5.57□□□□□ -1.52
PABPC1-203ENST00000517921 H3BPC8 53 aa5.57□□□□□ -1.52
PABPC1-203ENST00000517921 NDUFC1O43677 76 aa5.57□□□□□ -1.52
PABPC1-203ENST00000517921 C20orf197Q8N268 126 aa5.57□□□□□ -1.52
PABPC1-203ENST00000517921 LINC00208Q96KT6 92 aa5.57□□□□□ -1.52
PABPC1-203ENST00000517921 IGKV2-30P06310 120 aa5.56□□□□□ -1.52
PABPC1-203ENST00000517921 C1orf64Q8NEQ6 169 aa5.56□□□□□ -1.52
PABPC1-203ENST00000517921 LOC101927531A0A1B0GV80 90 aa5.55□□□□□ -1.52
PABPC1-203ENST00000517921 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
PABPC1-203ENST00000517921 SNURFQ9Y675 71 aa5.55□□□□□ -1.52
PABPC1-203ENST00000517921 CYSTM1Q9H1C7 97 aa5.54□□□□□ -1.52
PABPC1-203ENST00000517921 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
PABPC1-203ENST00000517921 KRTAP9-6A0A140TA67 174 aa5.53□□□□□ -1.52
PABPC1-203ENST00000517921 C7orf65Q6ZTY9 151 aa5.53□□□□□ -1.52
PABPC1-203ENST00000517921 ATP5EP56381 51 aaPredicted RBP5.52□□□□□ -1.53
PABPC1-203ENST00000517921 CYP4F30PQ9H0H9 118 aa5.52□□□□□ -1.53
PABPC1-203ENST00000517921 H7BZZ5 65 aa5.51□□□□□ -1.53
PABPC1-203ENST00000517921 FAM236DA0A1B0GTK5 79 aa5.5□□□□□ -1.53
PABPC1-203ENST00000517921 FAM236CP0DP71 79 aa5.5□□□□□ -1.53
PABPC1-203ENST00000517921 SPINK7P58062 85 aa5.5□□□□□ -1.53
PABPC1-203ENST00000517921 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
PABPC1-203ENST00000517921 KRTAP4-1Q9BYQ7 146 aa5.48□□□□□ -1.53
PABPC1-203ENST00000517921 SERP1Q9Y6X1 66 aa5.48□□□□□ -1.53
PABPC1-203ENST00000517921 MUC2Q02817 5179 aa5.45□□□□□ -1.54
PABPC1-203ENST00000517921 HRES1P13985 223 aa5.45□□□□□ -1.54
PABPC1-203ENST00000517921 KRTAP9-2Q9BYQ4 174 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms