RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 SACSQ9NZJ4 4579 aa0.26□□□□□ -2.37
SCARNA11.3-201ENST00000517276 H3BNG1 76 aa0.26□□□□□ -2.37
SCARNA11.3-201ENST00000517276 FLNBO75369 2602 aaKnown RBP0.26□□□□□ -2.37
SCARNA11.3-201ENST00000517276 NF1P21359 2839 aa0.25□□□□□ -2.37
SCARNA11.3-201ENST00000517276 DDX60Q8IY21 1712 aaKnown RBP0.25□□□□□ -2.37
SCARNA11.3-201ENST00000517276 IGLV5-48A0A075B6I7 105 aa0.25□□□□□ -2.37
SCARNA11.3-201ENST00000517276 SMIM2Q9BVW6 85 aa0.25□□□□□ -2.37
SCARNA11.3-201ENST00000517276 PKHD1P08F94 4074 aa0.24□□□□□ -2.37
SCARNA11.3-201ENST00000517276 KIF21BO75037 1637 aa0.24□□□□□ -2.37
SCARNA11.3-201ENST00000517276 MAST4O15021 2626 aa0.24□□□□□ -2.37
SCARNA11.3-201ENST00000517276 NFAT5O94916 1531 aa0.24□□□□□ -2.37
SCARNA11.3-201ENST00000517276 GPR98Q8WXG9 6306 aa0.24□□□□□ -2.37
SCARNA11.3-201ENST00000517276 SPRR2BP35325 72 aa0.23□□□□□ -2.37
SCARNA11.3-201ENST00000517276 COL7A1Q02388 2944 aa0.23□□□□□ -2.37
SCARNA11.3-201ENST00000517276 MUC5BQ9HC84 5762 aaPredicted RBP0.23□□□□□ -2.37
SCARNA11.3-201ENST00000517276 LRP2P98164 4655 aa0.22□□□□□ -2.37
SCARNA11.3-201ENST00000517276 SPTBN4Q9H254 2564 aa0.22□□□□□ -2.37
SCARNA11.3-201ENST00000517276 NOP10Q9NPE3 64 aaKnown RBP0.22□□□□□ -2.37
SCARNA11.3-201ENST00000517276 IQGAP2Q13576 1575 aa0.22□□□□□ -2.37
SCARNA11.3-201ENST00000517276 DNAH11Q96DT5 4516 aa0.22□□□□□ -2.37
SCARNA11.3-201ENST00000517276 PDZD2O15018 2839 aa0.22□□□□□ -2.37
SCARNA11.3-201ENST00000517276 GCN1Q92616 2671 aaKnown RBP0.21□□□□□ -2.38
SCARNA11.3-201ENST00000517276 SRRM2Q9UQ35 2752 aaKnown RBP0.21□□□□□ -2.38
SCARNA11.3-201ENST00000517276 FLNCQ14315 2725 aa0.21□□□□□ -2.38
SCARNA11.3-201ENST00000517276 DNAH2Q9P225 4427 aa0.21□□□□□ -2.38
SCARNA11.3-201ENST00000517276 SYNE2Q8WXH0 6885 aaKnown RBP0.21□□□□□ -2.38
SCARNA11.3-201ENST00000517276 DMXL1Q9Y485 3027 aa0.21□□□□□ -2.38
SCARNA11.3-201ENST00000517276 NEBP20929 6669 aa0.21□□□□□ -2.38
SCARNA11.3-201ENST00000517276 AHNAKQ09666 5890 aaKnown RBP0.21□□□□□ -2.38
SCARNA11.3-201ENST00000517276 ZZEF1O43149 2961 aa0.21□□□□□ -2.38
SCARNA11.3-201ENST00000517276 PKHD1L1Q86WI1 4243 aa0.21□□□□□ -2.38
SCARNA11.3-201ENST00000517276 APOBP04114 4563 aaKnown RBP0.2□□□□□ -2.38
SCARNA11.3-201ENST00000517276 ANK3Q12955 4377 aaKnown RBP0.2□□□□□ -2.38
SCARNA11.3-201ENST00000517276 PCLOQ9Y6V0 5065 aa0.2□□□□□ -2.38
SCARNA11.3-201ENST00000517276 DNAH3Q8TD57 4116 aa0.2□□□□□ -2.38
SCARNA11.3-201ENST00000517276 C9orf92A6NGG3 77 aa0.2□□□□□ -2.38
SCARNA11.3-201ENST00000517276 KRTAP6-2Q3LI66 62 aa0.2□□□□□ -2.38
SCARNA11.3-201ENST00000517276 SONP18583 2426 aaKnown RBP0.2□□□□□ -2.38
SCARNA11.3-201ENST00000517276 FLNAP21333 2647 aaKnown RBP0.2□□□□□ -2.38
SCARNA11.3-201ENST00000517276 STAB1Q9NY15 2570 aa0.2□□□□□ -2.38
SCARNA11.3-201ENST00000517276 UBR4Q5T4S7 5183 aa0.19□□□□□ -2.38
SCARNA11.3-201ENST00000517276 SPG11Q96JI7 2443 aa0.19□□□□□ -2.38
SCARNA11.3-201ENST00000517276 FLGP20930 4061 aaPredicted RBP0.19□□□□□ -2.38
SCARNA11.3-201ENST00000517276 DSTQ03001 7570 aaKnown RBP0.19□□□□□ -2.38
SCARNA11.3-201ENST00000517276 MMP24-AS1A0A0U1RRL7 71 aa0.19□□□□□ -2.38
SCARNA11.3-201ENST00000517276 CUBNO60494 3623 aa0.19□□□□□ -2.38
SCARNA11.3-201ENST00000517276 HMCN1Q96RW7 5635 aa0.19□□□□□ -2.38
SCARNA11.3-201ENST00000517276 FSIP2Q5CZC0 6907 aa0.19□□□□□ -2.38
SCARNA11.3-201ENST00000517276 MTORP42345 2549 aa0.19□□□□□ -2.38
SCARNA11.3-201ENST00000517276 MACF1Q9UPN3 7388 aaKnown RBP0.19□□□□□ -2.38
SCARNA11.3-201ENST00000517276 ANKRD11Q6UB99 2663 aaPredicted RBP0.19□□□□□ -2.38
SCARNA11.3-201ENST00000517276 COL6A3P12111 3177 aa0.18□□□□□ -2.38
SCARNA11.3-201ENST00000517276 TENM2Q9NT68 2774 aa0.18□□□□□ -2.38
SCARNA11.3-201ENST00000517276 FAM208AQ9UK61 1670 aaKnown RBP0.18□□□□□ -2.38
SCARNA11.3-201ENST00000517276 TEP1Q99973 2627 aaKnown RBP0.18□□□□□ -2.38
SCARNA11.3-201ENST00000517276 AHNAK2Q8IVF2 5795 aa0.18□□□□□ -2.38
SCARNA11.3-201ENST00000517276 USP9XQ93008 2570 aaPredicted RBP0.17□□□□□ -2.38
SCARNA11.3-201ENST00000517276 FASNP49327 2511 aaKnown RBP0.17□□□□□ -2.38
SCARNA11.3-201ENST00000517276 LRRK2Q5S007 2527 aa0.17□□□□□ -2.38
SCARNA11.3-201ENST00000517276 ANKHD1Q8IWZ3 2542 aaKnown RBP0.17□□□□□ -2.38
SCARNA11.3-201ENST00000517276 M0QY20 66 aa0.17□□□□□ -2.38
SCARNA11.3-201ENST00000517276 NDUFA1O15239 70 aa0.17□□□□□ -2.38
SCARNA11.3-201ENST00000517276 MYO18BQ8IUG5 2567 aa0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 SETD2Q9BYW2 2564 aaPredicted RBP0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 MUC2Q02817 5179 aa0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 AKAP9Q99996 3911 aa0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 KIAA1109Q2LD37 5005 aa0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 FAT3Q8TDW7 4589 aa0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 ZFHX4Q86UP3 3567 aa0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 DEFB110Q30KQ9 67 aa0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 ACACAQ13085 2346 aa0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 RELNP78509 3460 aa0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 RYR1P21817 5038 aa0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 SVEP1Q4LDE5 3571 aa0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 MYO9AB2RTY4 2548 aa0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 COL6A5A8TX70 2615 aa0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 KMT2CQ8NEZ4 4911 aaKnown RBP0.16□□□□□ -2.38
SCARNA11.3-201ENST00000517276 CCDC168Q8NDH2 2452 aa0.15□□□□□ -2.38
SCARNA11.3-201ENST00000517276 SSPOA2VEC9 5147 aa0.15□□□□□ -2.38
SCARNA11.3-201ENST00000517276 USP9YO00507 2555 aaPredicted RBP0.15□□□□□ -2.38
SCARNA11.3-201ENST00000517276 EPG5Q9HCE0 2579 aa0.15□□□□□ -2.38
SCARNA11.3-201ENST00000517276 ITPR3Q14573 2671 aa0.15□□□□□ -2.39
SCARNA11.3-201ENST00000517276 RYR2Q92736 4967 aa0.15□□□□□ -2.39
SCARNA11.3-201ENST00000517276 ABCA13Q86UQ4 5058 aa0.15□□□□□ -2.39
SCARNA11.3-201ENST00000517276 CEP295Q9C0D2 2601 aa0.15□□□□□ -2.39
SCARNA11.3-201ENST00000517276 TOP2AP11388 1531 aaKnown RBP0.15□□□□□ -2.39
SCARNA11.3-201ENST00000517276 DOPEY1Q5JWR5 2465 aa0.15□□□□□ -2.39
SCARNA11.3-201ENST00000517276 RIF1Q5UIP0 2472 aaKnown RBP0.15□□□□□ -2.39
SCARNA11.3-201ENST00000517276 RYR3Q15413 4870 aa0.15□□□□□ -2.39
SCARNA11.3-201ENST00000517276 HERC1Q15751 4861 aa0.15□□□□□ -2.39
SCARNA11.3-201ENST00000517276 EPPK1P58107 5090 aaKnown RBP0.15□□□□□ -2.39
SCARNA11.3-201ENST00000517276 TACC2O95359 2948 aa0.15□□□□□ -2.39
SCARNA11.3-201ENST00000517276 NBEAL1Q6ZS30 2694 aa0.15□□□□□ -2.39
SCARNA11.3-201ENST00000517276 UTP20O75691 2785 aaKnown RBP0.15□□□□□ -2.39
SCARNA11.3-201ENST00000517276 MUC5ACP98088 5654 aa0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 HYDINQ4G0P3 5121 aa0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 DNHD1Q96M86 4753 aa0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 DYNC2H1Q8NCM8 4307 aaKnown RBP0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 TLN1Q9Y490 2541 aaKnown RBP0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 DEFB131AP59861 70 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms