RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 MTORP42345 2549 aa1.2□□□□□ -2.22
RNU1-40P-201ENST00000516816 KRTAP9-6A0A140TA67 174 aa1.2□□□□□ -2.22
RNU1-40P-201ENST00000516816 A0A1B0GU33 70 aa1.2□□□□□ -2.22
RNU1-40P-201ENST00000516816 LINC00304Q8N9R0 145 aa1.2□□□□□ -2.22
RNU1-40P-201ENST00000516816 KRTAP9-2Q9BYQ4 174 aa1.2□□□□□ -2.22
RNU1-40P-201ENST00000516816 UBR5O95071 2799 aaPredicted RBP1.2□□□□□ -2.22
RNU1-40P-201ENST00000516816 FLNCQ14315 2725 aa1.2□□□□□ -2.22
RNU1-40P-201ENST00000516816 MUC3AQ02505 3323 aa1.2□□□□□ -2.22
RNU1-40P-201ENST00000516816 SPENQ96T58 3664 aaKnown RBP1.19□□□□□ -2.22
RNU1-40P-201ENST00000516816 F8P00451 2351 aa1.19□□□□□ -2.22
RNU1-40P-201ENST00000516816 NF1P21359 2839 aa1.19□□□□□ -2.22
RNU1-40P-201ENST00000516816 ZANQ9Y493 2812 aa1.19□□□□□ -2.22
RNU1-40P-201ENST00000516816 PANO1I0J062 215 aa1.19□□□□□ -2.22
RNU1-40P-201ENST00000516816 LUZP6Q538Z0 58 aa1.19□□□□□ -2.22
RNU1-40P-201ENST00000516816 KRTAP19-1Q8IUB9 90 aa1.19□□□□□ -2.22
RNU1-40P-201ENST00000516816 KRTAP4-12Q9BQ66 201 aa1.19□□□□□ -2.22
RNU1-40P-201ENST00000516816 KRTAP3-1Q9BYR8 98 aa1.19□□□□□ -2.22
RNU1-40P-201ENST00000516816 RELNP78509 3460 aa1.19□□□□□ -2.22
RNU1-40P-201ENST00000516816 ATRQ13535 2644 aa1.19□□□□□ -2.22
RNU1-40P-201ENST00000516816 HELZ2Q9BYK8 2649 aaKnown RBP1.19□□□□□ -2.22
RNU1-40P-201ENST00000516816 USP24Q9UPU5 2620 aa1.18□□□□□ -2.22
RNU1-40P-201ENST00000516816 CRIPTQ9P021 101 aa1.18□□□□□ -2.22
RNU1-40P-201ENST00000516816 FASNP49327 2511 aaKnown RBP1.17□□□□□ -2.22
RNU1-40P-201ENST00000516816 MT3P25713 68 aa1.17□□□□□ -2.22
RNU1-40P-201ENST00000516816 ROMO1P60602 79 aa1.17□□□□□ -2.22
RNU1-40P-201ENST00000516816 KRTAP13-3Q3SY46 172 aa1.17□□□□□ -2.22
RNU1-40P-201ENST00000516816 COX6B2Q6YFQ2 88 aa1.17□□□□□ -2.22
RNU1-40P-201ENST00000516816 PRAC1Q96KF2 57 aa1.17□□□□□ -2.22
RNU1-40P-201ENST00000516816 SVEP1Q4LDE5 3571 aa1.17□□□□□ -2.22
RNU1-40P-201ENST00000516816 TENM2Q9NT68 2774 aa1.17□□□□□ -2.22
RNU1-40P-201ENST00000516816 UNC79Q9P2D8 2635 aa1.17□□□□□ -2.22
RNU1-40P-201ENST00000516816 H1FX-AS1Q4G0G2 97 aa1.16□□□□□ -2.22
RNU1-40P-201ENST00000516816 KRTAP13-2Q52LG2 175 aa1.16□□□□□ -2.22
RNU1-40P-201ENST00000516816 CSAG1Q6PB30 78 aa1.16□□□□□ -2.22
RNU1-40P-201ENST00000516816 Q6ZSA8 131 aa1.16□□□□□ -2.22
RNU1-40P-201ENST00000516816 Q8N1X5 172 aa1.16□□□□□ -2.22
RNU1-40P-201ENST00000516816 VPS13CQ709C8 3753 aa1.16□□□□□ -2.22
RNU1-40P-201ENST00000516816 C9orf92A6NGG3 77 aa1.15□□□□□ -2.23
RNU1-40P-201ENST00000516816 A8MU10 97 aa1.15□□□□□ -2.23
RNU1-40P-201ENST00000516816 A8MUU9 505 aa1.15□□□□□ -2.23
RNU1-40P-201ENST00000516816 KRTAP10-1P60331 282 aa1.15□□□□□ -2.23
RNU1-40P-201ENST00000516816 KRTAP10-2P60368 255 aa1.15□□□□□ -2.23
RNU1-40P-201ENST00000516816 RPL37P61927 97 aaKnown RBP1.15□□□□□ -2.23
RNU1-40P-201ENST00000516816 C20orf166-AS1Q96NR2 134 aa1.15□□□□□ -2.23
RNU1-40P-201ENST00000516816 KRTAP9-9Q9BYP9 154 aa1.15□□□□□ -2.23
RNU1-40P-201ENST00000516816 KRTAP9-4Q9BYQ2 154 aa1.15□□□□□ -2.23
RNU1-40P-201ENST00000516816 FLNBO75369 2602 aaKnown RBP1.15□□□□□ -2.23
RNU1-40P-201ENST00000516816 CSMD2Q7Z408 3487 aa1.14□□□□□ -2.23
RNU1-40P-201ENST00000516816 MAST4O15021 2626 aa1.14□□□□□ -2.23
RNU1-40P-201ENST00000516816 NDUFAF8A1L188 74 aa1.14□□□□□ -2.23
RNU1-40P-201ENST00000516816 LCE3BQ5TA77 95 aa1.14□□□□□ -2.23
RNU1-40P-201ENST00000516816 SPINT4Q6UDR6 99 aa1.14□□□□□ -2.23
RNU1-40P-201ENST00000516816 NSD1Q96L73 2696 aaPredicted RBP1.13□□□□□ -2.23
RNU1-40P-201ENST00000516816 VWFP04275 2813 aa1.13□□□□□ -2.23
RNU1-40P-201ENST00000516816 SMR3BP02814 79 aaPredicted RBP1.13□□□□□ -2.23
RNU1-40P-201ENST00000516816 KRTAP1-4P0C5Y4 121 aa1.13□□□□□ -2.23
RNU1-40P-201ENST00000516816 KRTAP25-1Q3LHN0 102 aa1.13□□□□□ -2.23
RNU1-40P-201ENST00000516816 HIVEP1P15822 2718 aa1.12□□□□□ -2.23
RNU1-40P-201ENST00000516816 M0QZ58 72 aa1.12□□□□□ -2.23
RNU1-40P-201ENST00000516816 KRTAP21-3Q3LHN1 58 aa1.12□□□□□ -2.23
RNU1-40P-201ENST00000516816 LCE4AQ5TA78 99 aa1.12□□□□□ -2.23
RNU1-40P-201ENST00000516816 ADM2Q7Z4H4 148 aa1.12□□□□□ -2.23
RNU1-40P-201ENST00000516816 S4R3F8 94 aa1.12□□□□□ -2.23
RNU1-40P-201ENST00000516816 NIPBLQ6KC79 2804 aaeCLIP1.12□□□□□ -2.23
RNU1-40P-201ENST00000516816 HECTD1Q9ULT8 2610 aa1.12□□□□□ -2.23
RNU1-40P-201ENST00000516816 PKD1L1Q8TDX9 2849 aa1.11□□□□□ -2.23
RNU1-40P-201ENST00000516816 AKAP9Q99996 3911 aa1.11□□□□□ -2.23
RNU1-40P-201ENST00000516816 ZNF469Q96JG9 3925 aaPredicted RBP1.11□□□□□ -2.23
RNU1-40P-201ENST00000516816 NBEAL1Q6ZS30 2694 aa1.11□□□□□ -2.23
RNU1-40P-201ENST00000516816 KRTAP4-8A0A0G2JLE6 195 aa1.11□□□□□ -2.23
RNU1-40P-201ENST00000516816 KRTAP9-7A8MTY7 169 aa1.11□□□□□ -2.23
RNU1-40P-201ENST00000516816 KRTAP15-1Q3LI76 137 aa1.11□□□□□ -2.23
RNU1-40P-201ENST00000516816 STAB1Q9NY15 2570 aa1.1□□□□□ -2.23
RNU1-40P-201ENST00000516816 TENM4Q6N022 2769 aa1.1□□□□□ -2.23
RNU1-40P-201ENST00000516816 COL6A5A8TX70 2615 aa1.1□□□□□ -2.23
RNU1-40P-201ENST00000516816 ANK3Q12955 4377 aaKnown RBP1.09□□□□□ -2.23
RNU1-40P-201ENST00000516816 TENM1Q9UKZ4 2725 aa1.09□□□□□ -2.23
RNU1-40P-201ENST00000516816 A0A0D9SG42 100 aa1.09□□□□□ -2.23
RNU1-40P-201ENST00000516816 H0YAA0 97 aa1.09□□□□□ -2.23
RNU1-40P-201ENST00000516816 CUBNO60494 3623 aa1.09□□□□□ -2.24
RNU1-40P-201ENST00000516816 TENM3Q9P273 2699 aa1.09□□□□□ -2.24
RNU1-40P-201ENST00000516816 NBPF19A0A087WUL8 3843 aa1.08□□□□□ -2.24
RNU1-40P-201ENST00000516816 MGAM2Q2M2H8 2515 aa1.08□□□□□ -2.24
RNU1-40P-201ENST00000516816 KRTAP10-8P60410 259 aa1.08□□□□□ -2.24
RNU1-40P-201ENST00000516816 LCE1DQ5T752 114 aa1.08□□□□□ -2.24
RNU1-40P-201ENST00000516816 R4GN34 69 aa1.08□□□□□ -2.24
RNU1-40P-201ENST00000516816 BAHCC1Q9P281 2608 aa1.08□□□□□ -2.24
RNU1-40P-201ENST00000516816 ALMS1Q8TCU4 4167 aa1.07□□□□□ -2.24
RNU1-40P-201ENST00000516816 FBN1P35555 2871 aaKnown RBP1.07□□□□□ -2.24
RNU1-40P-201ENST00000516816 Q5VSD8 79 aa1.07□□□□□ -2.24
RNU1-40P-201ENST00000516816 NOTCH1P46531 2555 aa1.07□□□□□ -2.24
RNU1-40P-201ENST00000516816 STAB2Q8WWQ8 2551 aa1.06□□□□□ -2.24
RNU1-40P-201ENST00000516816 P0C880 135 aa1.06□□□□□ -2.24
RNU1-40P-201ENST00000516816 PP632Q6XCG6 107 aa1.06□□□□□ -2.24
RNU1-40P-201ENST00000516816 KRTAP4-9Q9BYQ8 210 aa1.06□□□□□ -2.24
RNU1-40P-201ENST00000516816 KRTAP4-7Q9BYR0 210 aa1.06□□□□□ -2.24
RNU1-40P-201ENST00000516816 OTOGQ6ZRI0 2925 aa1.06□□□□□ -2.24
RNU1-40P-201ENST00000516816 SRRM2Q9UQ35 2752 aaKnown RBP1.06□□□□□ -2.24
RNU1-40P-201ENST00000516816 TGP01266 2768 aa1.05□□□□□ -2.24
RNU1-40P-201ENST00000516816 A0A1B0GVY2 172 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms