RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 WFDC13Q8IUB5 93 aa4.35□□□□□ -1.71
SCARNA20.1-201ENST00000516009 TNXBP22105 4242 aa4.35□□□□□ -1.71
SCARNA20.1-201ENST00000516009 CASC2Q6XLA1 102 aa4.34□□□□□ -1.71
SCARNA20.1-201ENST00000516009 SMIM20Q8N5G0 67 aa4.34□□□□□ -1.71
SCARNA20.1-201ENST00000516009 C8orf17Q9NRJ1 99 aa4.34□□□□□ -1.71
SCARNA20.1-201ENST00000516009 FLG2Q5D862 2391 aaPredicted RBP4.34□□□□□ -1.72
SCARNA20.1-201ENST00000516009 MMP24-AS1A0A0U1RRL7 71 aa4.33□□□□□ -1.72
SCARNA20.1-201ENST00000516009 C8orf87E5RJ46 101 aa4.33□□□□□ -1.72
SCARNA20.1-201ENST00000516009 TRAV7A0A075B6U4 112 aa4.32□□□□□ -1.72
SCARNA20.1-201ENST00000516009 hDV103S1A0JD37 113 aa4.32□□□□□ -1.72
SCARNA20.1-201ENST00000516009 KRTAP29-1A8MX34 341 aaPredicted RBP4.32□□□□□ -1.72
SCARNA20.1-201ENST00000516009 SERP2Q8N6R1 65 aa4.32□□□□□ -1.72
SCARNA20.1-201ENST00000516009 OXTP01178 125 aa4.31□□□□□ -1.72
SCARNA20.1-201ENST00000516009 KRTAP4-5Q9BYR2 181 aa4.31□□□□□ -1.72
SCARNA20.1-201ENST00000516009 HERC2O95714 4834 aa4.31□□□□□ -1.72
SCARNA20.1-201ENST00000516009 MYCBP2O75592 4640 aa4.31□□□□□ -1.72
SCARNA20.1-201ENST00000516009 MT1HL1P0DM35 61 aa4.3□□□□□ -1.72
SCARNA20.1-201ENST00000516009 COX7CP15954 63 aa4.3□□□□□ -1.72
SCARNA20.1-201ENST00000516009 LINC00313P59037 77 aa4.3□□□□□ -1.72
SCARNA20.1-201ENST00000516009 TMEM254Q8TBM7 123 aa4.3□□□□□ -1.72
SCARNA20.1-201ENST00000516009 OCR1Q9BZK8 76 aa4.3□□□□□ -1.72
SCARNA20.1-201ENST00000516009 UQCRQO14949 82 aa4.29□□□□□ -1.72
SCARNA20.1-201ENST00000516009 NOTCH2NLQ7Z3S9 236 aa4.29□□□□□ -1.72
SCARNA20.1-201ENST00000516009 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
SCARNA20.1-201ENST00000516009 RETNLBQ9BQ08 111 aa4.28□□□□□ -1.72
SCARNA20.1-201ENST00000516009 CCDC179H3BU77 68 aa4.27□□□□□ -1.73
SCARNA20.1-201ENST00000516009 NDUFS5O43920 106 aa4.27□□□□□ -1.73
SCARNA20.1-201ENST00000516009 DMBT1Q9UGM3 2413 aaPredicted RBP4.26□□□□□ -1.73
SCARNA20.1-201ENST00000516009 ABCA13Q86UQ4 5058 aa4.26□□□□□ -1.73
SCARNA20.1-201ENST00000516009 TP53AIP1Q9HCN2 124 aa4.25□□□□□ -1.73
SCARNA20.1-201ENST00000516009 KRTAP16-1A8MUX0 517 aa4.24□□□□□ -1.73
SCARNA20.1-201ENST00000516009 C5orf47Q569G3 176 aa4.24□□□□□ -1.73
SCARNA20.1-201ENST00000516009 FP248Q71RG6 208 aaPredicted RBP4.24□□□□□ -1.73
SCARNA20.1-201ENST00000516009 C20orf197Q8N268 126 aa4.24□□□□□ -1.73
SCARNA20.1-201ENST00000516009 C9orf92A6NGG3 77 aa4.22□□□□□ -1.73
SCARNA20.1-201ENST00000516009 H0Y9P7 68 aa4.22□□□□□ -1.73
SCARNA20.1-201ENST00000516009 MP68P56378 58 aa4.22□□□□□ -1.73
SCARNA20.1-201ENST00000516009 Q8N9P0 234 aaPredicted RBP4.22□□□□□ -1.73
SCARNA20.1-201ENST00000516009 IGLV7-46A0A075B6I9 117 aa4.21□□□□□ -1.74
SCARNA20.1-201ENST00000516009 TRAV22A0A0B4J277 110 aa4.21□□□□□ -1.74
SCARNA20.1-201ENST00000516009 J3QL48 77 aa4.21□□□□□ -1.74
SCARNA20.1-201ENST00000516009 A0A0U1RQV1 116 aa4.2□□□□□ -1.74
SCARNA20.1-201ENST00000516009 KLKP1Q107X0 134 aa4.2□□□□□ -1.74
SCARNA20.1-201ENST00000516009 SNURFQ9Y675 71 aa4.2□□□□□ -1.74
SCARNA20.1-201ENST00000516009 H3BPC8 53 aa4.19□□□□□ -1.74
SCARNA20.1-201ENST00000516009 LINC00208Q96KT6 92 aa4.19□□□□□ -1.74
SCARNA20.1-201ENST00000516009 PRR4Q16378 134 aa4.18□□□□□ -1.74
SCARNA20.1-201ENST00000516009 A8MUU9 505 aa4.17□□□□□ -1.74
SCARNA20.1-201ENST00000516009 NDUFC1O43677 76 aa4.17□□□□□ -1.74
SCARNA20.1-201ENST00000516009 Q5W150 140 aa4.17□□□□□ -1.74
SCARNA20.1-201ENST00000516009 C1orf64Q8NEQ6 169 aa4.17□□□□□ -1.74
SCARNA20.1-201ENST00000516009 C20orf166-AS1Q96NR2 134 aa4.17□□□□□ -1.74
SCARNA20.1-201ENST00000516009 CYSTM1Q9H1C7 97 aa4.17□□□□□ -1.74
SCARNA20.1-201ENST00000516009 KRTAP13-3Q3SY46 172 aa4.16□□□□□ -1.74
SCARNA20.1-201ENST00000516009 ZCCHC13Q8WW36 166 aaKnown RBP4.16□□□□□ -1.74
SCARNA20.1-201ENST00000516009 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
SCARNA20.1-201ENST00000516009 H7BZZ5 65 aa4.14□□□□□ -1.75
SCARNA20.1-201ENST00000516009 Q75L30 129 aa4.14□□□□□ -1.75
SCARNA20.1-201ENST00000516009 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
SCARNA20.1-201ENST00000516009 TMEM258P61165 79 aa4.12□□□□□ -1.75
SCARNA20.1-201ENST00000516009 XP32Q5T750 250 aa4.12□□□□□ -1.75
SCARNA20.1-201ENST00000516009 RPL37P61927 97 aaKnown RBP4.11□□□□□ -1.75
SCARNA20.1-201ENST00000516009 IGKV2-30P06310 120 aa4.1□□□□□ -1.75
SCARNA20.1-201ENST00000516009 CYP4F30PQ9H0H9 118 aa4.1□□□□□ -1.75
SCARNA20.1-201ENST00000516009 PCLOQ9Y6V0 5065 aa4.09□□□□□ -1.75
SCARNA20.1-201ENST00000516009 IGKV2D-30A0A075B6S6 120 aa4.09□□□□□ -1.75
SCARNA20.1-201ENST00000516009 FAM236DA0A1B0GTK5 79 aa4.09□□□□□ -1.75
SCARNA20.1-201ENST00000516009 FAM236CP0DP71 79 aa4.09□□□□□ -1.75
SCARNA20.1-201ENST00000516009 PCOTHQ58A44 107 aa4.09□□□□□ -1.75
SCARNA20.1-201ENST00000516009 ATP11AUNQ6ZP68 121 aa4.09□□□□□ -1.75
SCARNA20.1-201ENST00000516009 ATP5EP56381 51 aaPredicted RBP4.08□□□□□ -1.76
SCARNA20.1-201ENST00000516009 C7orf65Q6ZTY9 151 aa4.08□□□□□ -1.76
SCARNA20.1-201ENST00000516009 SPANXA2-OT1Q8N9U9 137 aa4.07□□□□□ -1.76
SCARNA20.1-201ENST00000516009 LPAP08519 4548 aa4.06□□□□□ -1.76
SCARNA20.1-201ENST00000516009 LRP2P98164 4655 aa4.05□□□□□ -1.76
SCARNA20.1-201ENST00000516009 HRES1P13985 223 aa4.04□□□□□ -1.76
SCARNA20.1-201ENST00000516009 SPINK7P58062 85 aa4.04□□□□□ -1.76
SCARNA20.1-201ENST00000516009 HERC1Q15751 4861 aa4.02□□□□□ -1.77
SCARNA20.1-201ENST00000516009 SEC61BP60468 96 aaKnown RBP4□□□□□ -1.77
SCARNA20.1-201ENST00000516009 SERP1Q9Y6X1 66 aa4□□□□□ -1.77
SCARNA20.1-201ENST00000516009 HMCN2Q8NDA2 5059 aa3.98□□□□□ -1.77
SCARNA20.1-201ENST00000516009 C4orf26Q17RF5 130 aa3.98□□□□□ -1.77
SCARNA20.1-201ENST00000516009 RPS28P62857 69 aaKnown RBP3.97□□□□□ -1.77
SCARNA20.1-201ENST00000516009 DMAC1Q96GE9 116 aa3.97□□□□□ -1.77
SCARNA20.1-201ENST00000516009 MUC17Q685J3 4493 aa3.97□□□□□ -1.77
SCARNA20.1-201ENST00000516009 ACYP2P14621 99 aa3.96□□□□□ -1.78
SCARNA20.1-201ENST00000516009 A8MUN3 132 aa3.95□□□□□ -1.78
SCARNA20.1-201ENST00000516009 COX6B2Q6YFQ2 88 aa3.94□□□□□ -1.78
SCARNA20.1-201ENST00000516009 COA5Q86WW8 74 aa3.94□□□□□ -1.78
SCARNA20.1-201ENST00000516009 CHKB-CPT1BH3BT56 60 aa3.91□□□□□ -1.78
SCARNA20.1-201ENST00000516009 SMIM26A0A096LP01 95 aa3.9□□□□□ -1.79
SCARNA20.1-201ENST00000516009 KRTAP3-1Q9BYR8 98 aa3.9□□□□□ -1.79
SCARNA20.1-201ENST00000516009 RBM12B-AS1Q9P1G2 102 aa3.9□□□□□ -1.79
SCARNA20.1-201ENST00000516009 MPLKIPQ8TAP9 179 aa3.88□□□□□ -1.79
SCARNA20.1-201ENST00000516009 KRTAP4-1Q9BYQ7 146 aa3.87□□□□□ -1.79
SCARNA20.1-201ENST00000516009 H1FX-AS1Q4G0G2 97 aa3.84□□□□□ -1.79
SCARNA20.1-201ENST00000516009 SPTSSBQ8NFR3 76 aa3.83□□□□□ -1.8
SCARNA20.1-201ENST00000516009 S4R3F8 94 aa3.82□□□□□ -1.8
SCARNA20.1-201ENST00000516009 V9GYY9 64 aa3.82□□□□□ -1.8
SCARNA20.1-201ENST00000516009 Q1T7F1 81 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms