RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 H1FX-AS1Q4G0G2 97 aa9.32□□□□□ -0.92
TRIM41-207ENST00000515223 TNRC18O15417 2968 aaPredicted RBP9.32□□□□□ -0.92
TRIM41-207ENST00000515223 HRNRQ86YZ3 2850 aaPredicted RBP9.32□□□□□ -0.92
TRIM41-207ENST00000515223 KRTAP7-1Q8IUC3 87 aa9.31□□□□□ -0.92
TRIM41-207ENST00000515223 ROMO1P60602 79 aa9.3□□□□□ -0.92
TRIM41-207ENST00000515223 FLNCQ14315 2725 aa9.3□□□□□ -0.92
TRIM41-207ENST00000515223 KRTAP11-1Q8IUC1 163 aa9.29□□□□□ -0.92
TRIM41-207ENST00000515223 UBR5O95071 2799 aaPredicted RBP9.28□□□□□ -0.92
TRIM41-207ENST00000515223 A8MU10 97 aa9.28□□□□□ -0.92
TRIM41-207ENST00000515223 RPS29P62273 56 aaKnown RBP9.26□□□□□ -0.93
TRIM41-207ENST00000515223 NOTCH2NLQ7Z3S9 236 aa9.26□□□□□ -0.93
TRIM41-207ENST00000515223 NSD1Q96L73 2696 aaPredicted RBP9.26□□□□□ -0.93
TRIM41-207ENST00000515223 UTP20O75691 2785 aaKnown RBP9.25□□□□□ -0.93
TRIM41-207ENST00000515223 CSMD1Q96PZ7 3565 aa9.23□□□□□ -0.93
TRIM41-207ENST00000515223 DMDP11532 3685 aa9.21□□□□□ -0.94
TRIM41-207ENST00000515223 KRTAP21-3Q3LHN1 58 aa9.2□□□□□ -0.94
TRIM41-207ENST00000515223 H3BS24 57 aa9.19□□□□□ -0.94
TRIM41-207ENST00000515223 ASB16-AS1Q495Z4 193 aa9.19□□□□□ -0.94
TRIM41-207ENST00000515223 RELNP78509 3460 aa9.19□□□□□ -0.94
TRIM41-207ENST00000515223 ZANQ9Y493 2812 aa9.17□□□□□ -0.94
TRIM41-207ENST00000515223 SMG1Q96Q15 3661 aaKnown RBP9.17□□□□□ -0.94
TRIM41-207ENST00000515223 Q6ZRN7 208 aaPredicted RBP9.17□□□□□ -0.94
TRIM41-207ENST00000515223 LAMA5O15230 3695 aa9.15□□□□□ -0.94
TRIM41-207ENST00000515223 SPATA8Q6RVD6 105 aa9.14□□□□□ -0.95
TRIM41-207ENST00000515223 ITPR2Q14571 2701 aa9.14□□□□□ -0.95
TRIM41-207ENST00000515223 A6NN06 94 aa9.13□□□□□ -0.95
TRIM41-207ENST00000515223 APCP25054 2843 aa9.12□□□□□ -0.95
TRIM41-207ENST00000515223 C20orf166-AS1Q96NR2 134 aa9.09□□□□□ -0.95
TRIM41-207ENST00000515223 A8MUU9 505 aa9.08□□□□□ -0.96
TRIM41-207ENST00000515223 HIVEP1P15822 2718 aa9.07□□□□□ -0.96
TRIM41-207ENST00000515223 FBN2P35556 2912 aa9.04□□□□□ -0.96
TRIM41-207ENST00000515223 CELSR2Q9HCU4 2923 aa9.03□□□□□ -0.96
TRIM41-207ENST00000515223 KRTAP13-2Q52LG2 175 aa9.01□□□□□ -0.97
TRIM41-207ENST00000515223 CRYBG3Q68DQ2 2970 aa8.98□□□□□ -0.97
TRIM41-207ENST00000515223 KRTAP13-1Q8IUC0 172 aa8.96□□□□□ -0.97
TRIM41-207ENST00000515223 DCHS2Q6V1P9 2916 aa8.95□□□□□ -0.98
TRIM41-207ENST00000515223 TENM4Q6N022 2769 aa8.94□□□□□ -0.98
TRIM41-207ENST00000515223 SVEP1Q4LDE5 3571 aa8.92□□□□□ -0.98
TRIM41-207ENST00000515223 KMT2BQ9UMN6 2715 aaPredicted RBP8.9□□□□□ -0.98
TRIM41-207ENST00000515223 NF1P21359 2839 aa8.9□□□□□ -0.99
TRIM41-207ENST00000515223 MUC3AQ02505 3323 aa8.88□□□□□ -0.99
TRIM41-207ENST00000515223 TNP1P09430 55 aa8.83□□□□□ -1
TRIM41-207ENST00000515223 NIPBLQ6KC79 2804 aaeCLIP8.81□□□□□ -1
TRIM41-207ENST00000515223 MXRA5Q9NR99 2828 aa8.8□□□□□ -1
TRIM41-207ENST00000515223 CELSR1Q9NYQ6 3014 aa8.77□□□□□ -1
TRIM41-207ENST00000515223 KRTAP25-1Q3LHN0 102 aa8.75□□□□□ -1.01
TRIM41-207ENST00000515223 SPENQ96T58 3664 aaKnown RBP8.72□□□□□ -1.01
TRIM41-207ENST00000515223 CUBNO60494 3623 aa8.65□□□□□ -1.03
TRIM41-207ENST00000515223 KRTAP10-8P60410 259 aa8.63□□□□□ -1.03
TRIM41-207ENST00000515223 XP32Q5T750 250 aa8.62□□□□□ -1.03
TRIM41-207ENST00000515223 TPRXLQ17RH7 258 aa8.56□□□□□ -1.04
TRIM41-207ENST00000515223 A0A1B0GVY2 172 aa8.55□□□□□ -1.04
TRIM41-207ENST00000515223 KRTAP16-1A8MUX0 517 aa8.55□□□□□ -1.04
TRIM41-207ENST00000515223 KRTAP1-4P0C5Y4 121 aa8.55□□□□□ -1.04
TRIM41-207ENST00000515223 TENM3Q9P273 2699 aa8.53□□□□□ -1.04
TRIM41-207ENST00000515223 C10orf95Q9H7T3 257 aa8.52□□□□□ -1.05
TRIM41-207ENST00000515223 PP632Q6XCG6 107 aa8.51□□□□□ -1.05
TRIM41-207ENST00000515223 KRTAP10-10P60014 251 aa8.5□□□□□ -1.05
TRIM41-207ENST00000515223 BSNQ9UPA5 3926 aa8.49□□□□□ -1.05
TRIM41-207ENST00000515223 PRO2289Q9P1D8 64 aa8.46□□□□□ -1.06
TRIM41-207ENST00000515223 H0YAA0 97 aa8.44□□□□□ -1.06
TRIM41-207ENST00000515223 NDUFAF8A1L188 74 aa8.43□□□□□ -1.06
TRIM41-207ENST00000515223 NBPF19A0A087WUL8 3843 aa8.43□□□□□ -1.06
TRIM41-207ENST00000515223 TENM1Q9UKZ4 2725 aa8.4□□□□□ -1.07
TRIM41-207ENST00000515223 CSMD2Q7Z408 3487 aa8.33□□□□□ -1.08
TRIM41-207ENST00000515223 KRTAP13-3Q3SY46 172 aa8.32□□□□□ -1.08
TRIM41-207ENST00000515223 VWFP04275 2813 aa8.28□□□□□ -1.08
TRIM41-207ENST00000515223 TGP01266 2768 aa8.27□□□□□ -1.09
TRIM41-207ENST00000515223 PDZD2O15018 2839 aa8.26□□□□□ -1.09
TRIM41-207ENST00000515223 TENM2Q9NT68 2774 aa8.25□□□□□ -1.09
TRIM41-207ENST00000515223 ANK3Q12955 4377 aaKnown RBP8.23□□□□□ -1.09
TRIM41-207ENST00000515223 VPS13CQ709C8 3753 aa8.19□□□□□ -1.1
TRIM41-207ENST00000515223 ZFHX3Q15911 3703 aa8.17□□□□□ -1.1
TRIM41-207ENST00000515223 FBN1P35555 2871 aaKnown RBP8.13□□□□□ -1.11
TRIM41-207ENST00000515223 P0C880 135 aa8.12□□□□□ -1.11
TRIM41-207ENST00000515223 PKD1L1Q8TDX9 2849 aa8.1□□□□□ -1.11
TRIM41-207ENST00000515223 TRRAPQ9Y4A5 3859 aa8.08□□□□□ -1.12
TRIM41-207ENST00000515223 OTOGQ6ZRI0 2925 aa8.01□□□□□ -1.13
TRIM41-207ENST00000515223 SRRM2Q9UQ35 2752 aaKnown RBP7.92□□□□□ -1.14
TRIM41-207ENST00000515223 KRTAP3-1Q9BYR8 98 aa7.89□□□□□ -1.15
TRIM41-207ENST00000515223 KRTAP12-2P59991 146 aa7.87□□□□□ -1.15
TRIM41-207ENST00000515223 AKAP9Q99996 3911 aa7.81□□□□□ -1.16
TRIM41-207ENST00000515223 FBN3Q75N90 2809 aa7.79□□□□□ -1.16
TRIM41-207ENST00000515223 ZNF469Q96JG9 3925 aaPredicted RBP7.76□□□□□ -1.17
TRIM41-207ENST00000515223 HUWE1Q7Z6Z7 4374 aaKnown RBP7.74□□□□□ -1.17
TRIM41-207ENST00000515223 KRTAP13-4Q3LI77 160 aa7.73□□□□□ -1.17
TRIM41-207ENST00000515223 CSMD3Q7Z407 3707 aa7.71□□□□□ -1.17
TRIM41-207ENST00000515223 KRTAP12-1P59990 96 aa7.68□□□□□ -1.18
TRIM41-207ENST00000515223 MEGF8Q7Z7M0 2845 aa7.65□□□□□ -1.18
TRIM41-207ENST00000515223 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
TRIM41-207ENST00000515223 KRTAP15-1Q3LI76 137 aa7.54□□□□□ -1.2
TRIM41-207ENST00000515223 COL7A1Q02388 2944 aa7.44□□□□□ -1.22
TRIM41-207ENST00000515223 KRTAP3-3Q9BYR6 98 aa7.41□□□□□ -1.22
TRIM41-207ENST00000515223 KRTAP3-2Q9BYR7 98 aa7.41□□□□□ -1.22
TRIM41-207ENST00000515223 DNAH10Q8IVF4 4471 aa7.4□□□□□ -1.23
TRIM41-207ENST00000515223 MT1HL1P0DM35 61 aa7.37□□□□□ -1.23
TRIM41-207ENST00000515223 DNAH9Q9NYC9 4486 aa7.3□□□□□ -1.24
TRIM41-207ENST00000515223 DNAH1Q9P2D7 4330 aa7.27□□□□□ -1.25
TRIM41-207ENST00000515223 PLECQ15149 4684 aaKnown RBP7.23□□□□□ -1.25
TRIM41-207ENST00000515223 KRTAP10-12P60413 245 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms