RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 F8WEM9 126 aa4.88□□□□□ -1.63
CCL28-204ENST00000514421 KRTAP13-2Q52LG2 175 aa4.88□□□□□ -1.63
CCL28-204ENST00000514421 IGFL1Q6UW32 110 aa4.88□□□□□ -1.63
CCL28-204ENST00000514421 FAM236AA0A1B0GUQ0 79 aa4.87□□□□□ -1.63
CCL28-204ENST00000514421 FAM236BA0A1B0GV22 79 aa4.87□□□□□ -1.63
CCL28-204ENST00000514421 NREPQ16612 68 aa4.86□□□□□ -1.63
CCL28-204ENST00000514421 ANAPC13Q9BS18 74 aa4.85□□□□□ -1.63
CCL28-204ENST00000514421 ATOX1O00244 68 aa4.84□□□□□ -1.63
CCL28-204ENST00000514421 LINC00304Q8N9R0 145 aa4.84□□□□□ -1.63
CCL28-204ENST00000514421 SPAG11AQ6PDA7 123 aa4.83□□□□□ -1.64
CCL28-204ENST00000514421 SSBP3-AS1Q7Z2R9 100 aa4.83□□□□□ -1.64
CCL28-204ENST00000514421 A0A087WVE0 104 aa4.82□□□□□ -1.64
CCL28-204ENST00000514421 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
CCL28-204ENST00000514421 BPY2O14599 106 aa4.81□□□□□ -1.64
CCL28-204ENST00000514421 IGKV4-1P06312 121 aa4.81□□□□□ -1.64
CCL28-204ENST00000514421 IGLV9-49A0A0B4J1Y8 123 aa4.8□□□□□ -1.64
CCL28-204ENST00000514421 A0A0G2JQZ4 141 aa4.79□□□□□ -1.64
CCL28-204ENST00000514421 SPINK1P00995 79 aa4.79□□□□□ -1.64
CCL28-204ENST00000514421 DSCR10P59022 87 aa4.79□□□□□ -1.64
CCL28-204ENST00000514421 MOBPQ13875 183 aa4.79□□□□□ -1.64
CCL28-204ENST00000514421 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
CCL28-204ENST00000514421 SERP2Q8N6R1 65 aa4.79□□□□□ -1.64
CCL28-204ENST00000514421 LRP2P98164 4655 aa4.79□□□□□ -1.64
CCL28-204ENST00000514421 A0A087WSZ3 146 aa4.78□□□□□ -1.64
CCL28-204ENST00000514421 UQCRQO14949 82 aa4.78□□□□□ -1.64
CCL28-204ENST00000514421 COX7CP15954 63 aa4.78□□□□□ -1.64
CCL28-204ENST00000514421 PRR4Q16378 134 aa4.78□□□□□ -1.64
CCL28-204ENST00000514421 SMIM20Q8N5G0 67 aa4.78□□□□□ -1.64
CCL28-204ENST00000514421 KRTAP9-8Q9BYQ0 159 aa4.78□□□□□ -1.64
CCL28-204ENST00000514421 LINC00472Q9H8W2 130 aa4.78□□□□□ -1.64
CCL28-204ENST00000514421 CD164Q04900 197 aa4.77□□□□□ -1.65
CCL28-204ENST00000514421 C9orf153Q5TBE3 101 aa4.77□□□□□ -1.65
CCL28-204ENST00000514421 CCDC179H3BU77 68 aa4.76□□□□□ -1.65
CCL28-204ENST00000514421 UBR4Q5T4S7 5183 aa4.75□□□□□ -1.65
CCL28-204ENST00000514421 TRAV7A0A075B6U4 112 aa4.75□□□□□ -1.65
CCL28-204ENST00000514421 J3KT08 172 aa4.75□□□□□ -1.65
CCL28-204ENST00000514421 RPS29P62273 56 aaKnown RBP4.74□□□□□ -1.65
CCL28-204ENST00000514421 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
CCL28-204ENST00000514421 Q8N9L7 120 aa4.74□□□□□ -1.65
CCL28-204ENST00000514421 Q96NJ1 140 aa4.74□□□□□ -1.65
CCL28-204ENST00000514421 RETNLBQ9BQ08 111 aa4.74□□□□□ -1.65
CCL28-204ENST00000514421 SS18L2Q9UHA2 77 aa4.74□□□□□ -1.65
CCL28-204ENST00000514421 K7EQZ3 153 aa4.73□□□□□ -1.65
CCL28-204ENST00000514421 ASB16-AS1Q495Z4 193 aa4.73□□□□□ -1.65
CCL28-204ENST00000514421 Q5XG85 94 aa4.73□□□□□ -1.65
CCL28-204ENST00000514421 OCR1Q9BZK8 76 aa4.73□□□□□ -1.65
CCL28-204ENST00000514421 LPAP08519 4548 aa4.73□□□□□ -1.65
CCL28-204ENST00000514421 IGLV7-46A0A075B6I9 117 aa4.72□□□□□ -1.65
CCL28-204ENST00000514421 A8MWP4 228 aa4.72□□□□□ -1.65
CCL28-204ENST00000514421 PRR15Q8IV56 129 aa4.72□□□□□ -1.65
CCL28-204ENST00000514421 FP248Q71RG6 208 aaPredicted RBP4.71□□□□□ -1.66
CCL28-204ENST00000514421 HCG22E2RYF7 251 aa4.7□□□□□ -1.66
CCL28-204ENST00000514421 HRCT1Q6UXD1 115 aa4.7□□□□□ -1.66
CCL28-204ENST00000514421 KLKP1Q107X0 134 aa4.69□□□□□ -1.66
CCL28-204ENST00000514421 LIMD2Q9BT23 127 aa4.68□□□□□ -1.66
CCL28-204ENST00000514421 TPRXLQ17RH7 258 aa4.67□□□□□ -1.66
CCL28-204ENST00000514421 DEFB116Q30KQ4 102 aa4.67□□□□□ -1.66
CCL28-204ENST00000514421 KRTAP9-7A8MTY7 169 aa4.66□□□□□ -1.66
CCL28-204ENST00000514421 MMP24-AS1A0A0U1RRL7 71 aa4.65□□□□□ -1.67
CCL28-204ENST00000514421 NDUFB1O75438 58 aa4.65□□□□□ -1.67
CCL28-204ENST00000514421 CYSTM1Q9H1C7 97 aa4.65□□□□□ -1.67
CCL28-204ENST00000514421 A0A1B0GVX0 72 aa4.64□□□□□ -1.67
CCL28-204ENST00000514421 A0A0U1RQV1 116 aa4.63□□□□□ -1.67
CCL28-204ENST00000514421 KRTAP13-3Q3SY46 172 aa4.63□□□□□ -1.67
CCL28-204ENST00000514421 CASC2Q6XLA1 102 aa4.63□□□□□ -1.67
CCL28-204ENST00000514421 C20orf197Q8N268 126 aa4.63□□□□□ -1.67
CCL28-204ENST00000514421 NDUFC1O43677 76 aa4.62□□□□□ -1.67
CCL28-204ENST00000514421 TMEM258P61165 79 aa4.62□□□□□ -1.67
CCL28-204ENST00000514421 C5orf47Q569G3 176 aa4.62□□□□□ -1.67
CCL28-204ENST00000514421 C1orf195Q5TG92 126 aa4.62□□□□□ -1.67
CCL28-204ENST00000514421 TMEM254Q8TBM7 123 aa4.62□□□□□ -1.67
CCL28-204ENST00000514421 C8orf17Q9NRJ1 99 aa4.62□□□□□ -1.67
CCL28-204ENST00000514421 RNF213Q63HN8 5207 aa4.62□□□□□ -1.67
CCL28-204ENST00000514421 H7BZZ5 65 aa4.61□□□□□ -1.67
CCL28-204ENST00000514421 ZCCHC13Q8WW36 166 aaKnown RBP4.61□□□□□ -1.67
CCL28-204ENST00000514421 hDV103S1A0JD37 113 aa4.6□□□□□ -1.67
CCL28-204ENST00000514421 WFDC13Q8IUB5 93 aa4.6□□□□□ -1.67
CCL28-204ENST00000514421 MUC17Q685J3 4493 aa4.6□□□□□ -1.67
CCL28-204ENST00000514421 C8orf87E5RJ46 101 aa4.59□□□□□ -1.67
CCL28-204ENST00000514421 H3BPC8 53 aa4.59□□□□□ -1.67
CCL28-204ENST00000514421 TP53AIP1Q9HCN2 124 aa4.59□□□□□ -1.67
CCL28-204ENST00000514421 IGHV6-1A0A0B4J1U7 121 aa4.57□□□□□ -1.68
CCL28-204ENST00000514421 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
CCL28-204ENST00000514421 RPS28P62857 69 aaKnown RBP4.56□□□□□ -1.68
CCL28-204ENST00000514421 NOTCH2NLQ7Z3S9 236 aa4.56□□□□□ -1.68
CCL28-204ENST00000514421 MRPL34Q9BQ48 92 aaKnown RBP4.56□□□□□ -1.68
CCL28-204ENST00000514421 SNURFQ9Y675 71 aa4.56□□□□□ -1.68
CCL28-204ENST00000514421 C9orf92A6NGG3 77 aa4.55□□□□□ -1.68
CCL28-204ENST00000514421 ATP5EP56381 51 aaPredicted RBP4.55□□□□□ -1.68
CCL28-204ENST00000514421 SEC61BP60468 96 aaKnown RBP4.55□□□□□ -1.68
CCL28-204ENST00000514421 TRAV22A0A0B4J277 110 aa4.54□□□□□ -1.68
CCL28-204ENST00000514421 KRTAP16-1A8MUX0 517 aa4.53□□□□□ -1.68
CCL28-204ENST00000514421 MP68P56378 58 aa4.53□□□□□ -1.68
CCL28-204ENST00000514421 LINC00313P59037 77 aa4.53□□□□□ -1.68
CCL28-204ENST00000514421 Q8N9P0 234 aaPredicted RBP4.53□□□□□ -1.68
CCL28-204ENST00000514421 MUC2Q02817 5179 aa4.52□□□□□ -1.69
CCL28-204ENST00000514421 H0Y9P7 68 aa4.52□□□□□ -1.69
CCL28-204ENST00000514421 FAM236DA0A1B0GTK5 79 aa4.51□□□□□ -1.69
CCL28-204ENST00000514421 FAM236CP0DP71 79 aa4.51□□□□□ -1.69
CCL28-204ENST00000514421 SPANXA2-OT1Q8N9U9 137 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms