RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 A0A1B0GVX0 72 aa6.11□□□□□ -1.43
HTT-213ENST00000513806 RNF213Q63HN8 5207 aa6.11□□□□□ -1.43
HTT-213ENST00000513806 IGKV3D-7A0A0C4DH55 119 aa6.1□□□□□ -1.43
HTT-213ENST00000513806 J3KT08 172 aa6.09□□□□□ -1.43
HTT-213ENST00000513806 LINC00313P59037 77 aa6.09□□□□□ -1.43
HTT-213ENST00000513806 KRTAP16-1A8MUX0 517 aa6.08□□□□□ -1.44
HTT-213ENST00000513806 A8MWP4 228 aa6.08□□□□□ -1.44
HTT-213ENST00000513806 PCOTHQ58A44 107 aa6.08□□□□□ -1.44
HTT-213ENST00000513806 Q8N9L7 120 aa6.08□□□□□ -1.44
HTT-213ENST00000513806 KRTAP4-1Q9BYQ7 146 aa6.08□□□□□ -1.44
HTT-213ENST00000513806 K7EQZ3 153 aa6.07□□□□□ -1.44
HTT-213ENST00000513806 BPY2O14599 106 aa6.07□□□□□ -1.44
HTT-213ENST00000513806 RPL37P61927 97 aaKnown RBP6.07□□□□□ -1.44
HTT-213ENST00000513806 UBL5Q9BZL1 73 aa6.06□□□□□ -1.44
HTT-213ENST00000513806 NDUFB1O75438 58 aa6.05□□□□□ -1.44
HTT-213ENST00000513806 PRR15Q8IV56 129 aa6.05□□□□□ -1.44
HTT-213ENST00000513806 C8orf17Q9NRJ1 99 aa6.05□□□□□ -1.44
HTT-213ENST00000513806 SEC61BP60468 96 aaKnown RBP6.04□□□□□ -1.44
HTT-213ENST00000513806 A8MUU9 505 aa6.03□□□□□ -1.44
HTT-213ENST00000513806 C8orf87E5RJ46 101 aa6.03□□□□□ -1.44
HTT-213ENST00000513806 Q75L30 129 aa6.03□□□□□ -1.44
HTT-213ENST00000513806 C20orf166-AS1Q96NR2 134 aa6.03□□□□□ -1.44
HTT-213ENST00000513806 MMP24-AS1A0A0U1RRL7 71 aa6.02□□□□□ -1.45
HTT-213ENST00000513806 MUC2Q02817 5179 aa6.01□□□□□ -1.45
HTT-213ENST00000513806 WFDC13Q8IUB5 93 aa5.99□□□□□ -1.45
HTT-213ENST00000513806 FAM240AA0A1B0GVK7 77 aa5.98□□□□□ -1.45
HTT-213ENST00000513806 ACYP1P07311 99 aa5.98□□□□□ -1.45
HTT-213ENST00000513806 ATP11AUNQ6ZP68 121 aa5.97□□□□□ -1.45
HTT-213ENST00000513806 hDV103S1A0JD37 113 aa5.95□□□□□ -1.46
HTT-213ENST00000513806 CXCL6P80162 114 aa5.94□□□□□ -1.46
HTT-213ENST00000513806 TMEM254Q8TBM7 123 aa5.94□□□□□ -1.46
HTT-213ENST00000513806 MRPL34Q9BQ48 92 aaKnown RBP5.94□□□□□ -1.46
HTT-213ENST00000513806 CASC2Q6XLA1 102 aa5.93□□□□□ -1.46
HTT-213ENST00000513806 Q8N9P0 234 aaPredicted RBP5.93□□□□□ -1.46
HTT-213ENST00000513806 NDUFS5O43920 106 aa5.92□□□□□ -1.46
HTT-213ENST00000513806 HCG22E2RYF7 251 aa5.91□□□□□ -1.46
HTT-213ENST00000513806 J3QR89 54 aa5.91□□□□□ -1.46
HTT-213ENST00000513806 ZCCHC13Q8WW36 166 aaKnown RBP5.9□□□□□ -1.46
HTT-213ENST00000513806 HIST1H4AP62805 103 aaKnown RBP5.89□□□□□ -1.47
HTT-213ENST00000513806 LINC00643Q86TS7 51 aa5.89□□□□□ -1.47
HTT-213ENST00000513806 A0A087WVE0 104 aa5.88□□□□□ -1.47
HTT-213ENST00000513806 ATP5EP2Q5VTU8 51 aa5.87□□□□□ -1.47
HTT-213ENST00000513806 Q5W150 140 aa5.86□□□□□ -1.47
HTT-213ENST00000513806 KRTAP19-2Q3LHN2 52 aa5.85□□□□□ -1.47
HTT-213ENST00000513806 K7ERU9 68 aa5.84□□□□□ -1.47
HTT-213ENST00000513806 FAT4Q6V0I7 4981 aa5.83□□□□□ -1.48
HTT-213ENST00000513806 LCE2CQ5TA81 110 aa5.81□□□□□ -1.48
HTT-213ENST00000513806 MT-ATP8P03928 68 aa5.8□□□□□ -1.48
HTT-213ENST00000513806 SPINK7P58062 85 aa5.8□□□□□ -1.48
HTT-213ENST00000513806 HRES1P13985 223 aa5.79□□□□□ -1.48
HTT-213ENST00000513806 IGKV2D-30A0A075B6S6 120 aa5.77□□□□□ -1.49
HTT-213ENST00000513806 A0A0U1RQV1 116 aa5.77□□□□□ -1.49
HTT-213ENST00000513806 IGKV2-30P06310 120 aa5.77□□□□□ -1.49
HTT-213ENST00000513806 FLGP20930 4061 aaPredicted RBP5.75□□□□□ -1.49
HTT-213ENST00000513806 COX6B2Q6YFQ2 88 aa5.75□□□□□ -1.49
HTT-213ENST00000513806 LCE2AQ5TA79 106 aaPredicted RBP5.72□□□□□ -1.49
HTT-213ENST00000513806 MPLKIPQ8TAP9 179 aa5.72□□□□□ -1.49
HTT-213ENST00000513806 TP53AIP1Q9HCN2 124 aa5.72□□□□□ -1.49
HTT-213ENST00000513806 MT1HP80294 61 aa5.71□□□□□ -1.5
HTT-213ENST00000513806 FAM236DA0A1B0GTK5 79 aa5.7□□□□□ -1.5
HTT-213ENST00000513806 FAM236CP0DP71 79 aa5.7□□□□□ -1.5
HTT-213ENST00000513806 C7orf65Q6ZTY9 151 aa5.7□□□□□ -1.5
HTT-213ENST00000513806 OCR1Q9BZK8 76 aa5.68□□□□□ -1.5
HTT-213ENST00000513806 RBM12B-AS1Q9P1G2 102 aa5.68□□□□□ -1.5
HTT-213ENST00000513806 TRAV22A0A0B4J277 110 aa5.67□□□□□ -1.5
HTT-213ENST00000513806 H0Y9P7 68 aa5.67□□□□□ -1.5
HTT-213ENST00000513806 UQCRQO14949 82 aa5.67□□□□□ -1.5
HTT-213ENST00000513806 FAM236AA0A1B0GUQ0 79 aa5.65□□□□□ -1.5
HTT-213ENST00000513806 FAM236BA0A1B0GV22 79 aa5.65□□□□□ -1.5
HTT-213ENST00000513806 SCGB1A1P11684 91 aa5.65□□□□□ -1.5
HTT-213ENST00000513806 IMUPQ9GZP8 106 aa5.65□□□□□ -1.5
HTT-213ENST00000513806 C4orf26Q17RF5 130 aa5.64□□□□□ -1.51
HTT-213ENST00000513806 CYP4F30PQ9H0H9 118 aa5.62□□□□□ -1.51
HTT-213ENST00000513806 M0R2T5 61 aa5.61□□□□□ -1.51
HTT-213ENST00000513806 LINC00208Q96KT6 92 aa5.61□□□□□ -1.51
HTT-213ENST00000513806 C1orf64Q8NEQ6 169 aa5.6□□□□□ -1.51
HTT-213ENST00000513806 LOC101927531A0A1B0GV80 90 aa5.59□□□□□ -1.51
HTT-213ENST00000513806 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
HTT-213ENST00000513806 ATOX1O00244 68 aa5.57□□□□□ -1.52
HTT-213ENST00000513806 KLKP1Q107X0 134 aa5.57□□□□□ -1.52
HTT-213ENST00000513806 MP68P56378 58 aa5.56□□□□□ -1.52
HTT-213ENST00000513806 KRTAP10-6P60371 365 aaPredicted RBP5.55□□□□□ -1.52
HTT-213ENST00000513806 C5orf47Q569G3 176 aa5.55□□□□□ -1.52
HTT-213ENST00000513806 TRAV7A0A075B6U4 112 aa5.54□□□□□ -1.52
HTT-213ENST00000513806 H1FX-AS1Q4G0G2 97 aa5.54□□□□□ -1.52
HTT-213ENST00000513806 LORP23490 312 aaPredicted RBP5.52□□□□□ -1.53
HTT-213ENST00000513806 SMIM20Q8N5G0 67 aa5.49□□□□□ -1.53
HTT-213ENST00000513806 SNURFQ9Y675 71 aa5.48□□□□□ -1.53
HTT-213ENST00000513806 H3BPC8 53 aa5.47□□□□□ -1.53
HTT-213ENST00000513806 SERP2Q8N6R1 65 aa5.45□□□□□ -1.54
HTT-213ENST00000513806 S4R3F8 94 aa5.45□□□□□ -1.54
HTT-213ENST00000513806 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
HTT-213ENST00000513806 LCA10Q71F78 164 aa5.43□□□□□ -1.54
HTT-213ENST00000513806 C20orf197Q8N268 126 aa5.43□□□□□ -1.54
HTT-213ENST00000513806 MT2AP02795 61 aa5.41□□□□□ -1.54
HTT-213ENST00000513806 KRTAP3-3Q9BYR6 98 aa5.4□□□□□ -1.54
HTT-213ENST00000513806 MT1FP04733 61 aa5.39□□□□□ -1.55
HTT-213ENST00000513806 COX7CP15954 63 aa5.38□□□□□ -1.55
HTT-213ENST00000513806 ANAPC13Q9BS18 74 aa5.35□□□□□ -1.55
HTT-213ENST00000513806 KRTAP9-2Q9BYQ4 174 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms