RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 KRTAP8-1Q8IUC2 63 aa5.19□□□□□ -1.58
COPS4-210ENST00000511708 KRTAP9-9Q9BYP9 154 aa5.19□□□□□ -1.58
COPS4-210ENST00000511708 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
COPS4-210ENST00000511708 IMUPQ9GZP8 106 aa5.19□□□□□ -1.58
COPS4-210ENST00000511708 TMA7Q9Y2S6 64 aaKnown RBP5.17□□□□□ -1.58
COPS4-210ENST00000511708 SVBPQ8N300 66 aa5.16□□□□□ -1.58
COPS4-210ENST00000511708 IGKV3D-7A0A0C4DH55 119 aa5.13□□□□□ -1.59
COPS4-210ENST00000511708 DSCR8Q96T75 97 aa5.12□□□□□ -1.59
COPS4-210ENST00000511708 DSTQ03001 7570 aaKnown RBP5.12□□□□□ -1.59
COPS4-210ENST00000511708 C5orf47Q569G3 176 aa5.11□□□□□ -1.59
COPS4-210ENST00000511708 ANKRD29Q8N6D5 301 aa5.11□□□□□ -1.59
COPS4-210ENST00000511708 FABP2P12104 132 aa5.1□□□□□ -1.59
COPS4-210ENST00000511708 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
COPS4-210ENST00000511708 LYRM7Q5U5X0 104 aa5.1□□□□□ -1.59
COPS4-210ENST00000511708 SNCGO76070 127 aa5.09□□□□□ -1.59
COPS4-210ENST00000511708 KLKP1Q107X0 134 aa5.08□□□□□ -1.6
COPS4-210ENST00000511708 H0YGX0 51 aa5.07□□□□□ -1.6
COPS4-210ENST00000511708 TRACP01848 142 aa5.07□□□□□ -1.6
COPS4-210ENST00000511708 CCKP06307 115 aa5.06□□□□□ -1.6
COPS4-210ENST00000511708 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
COPS4-210ENST00000511708 J3KT08 172 aa5.04□□□□□ -1.6
COPS4-210ENST00000511708 S100A6P06703 90 aa5.04□□□□□ -1.6
COPS4-210ENST00000511708 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
COPS4-210ENST00000511708 ATOH7Q8N100 152 aa5.04□□□□□ -1.6
COPS4-210ENST00000511708 C8orf17Q9NRJ1 99 aa5.04□□□□□ -1.6
COPS4-210ENST00000511708 A0A1B0GX51 115 aa5.03□□□□□ -1.6
COPS4-210ENST00000511708 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
COPS4-210ENST00000511708 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
COPS4-210ENST00000511708 A0A1B0GV72 72 aa5.02□□□□□ -1.61
COPS4-210ENST00000511708 KRTDAPP60985 99 aa5.02□□□□□ -1.61
COPS4-210ENST00000511708 MT1XP80297 61 aa5.02□□□□□ -1.61
COPS4-210ENST00000511708 SMIM6P0DI80 62 aa5.01□□□□□ -1.61
COPS4-210ENST00000511708 CSAG1Q6PB30 78 aa5□□□□□ -1.61
COPS4-210ENST00000511708 PRO2289Q9P1D8 64 aa5□□□□□ -1.61
COPS4-210ENST00000511708 NDUFB1O75438 58 aa4.99□□□□□ -1.61
COPS4-210ENST00000511708 C2orf91Q6ZV80 131 aa4.99□□□□□ -1.61
COPS4-210ENST00000511708 Q6ZVQ6 151 aa4.99□□□□□ -1.61
COPS4-210ENST00000511708 HIST1H2BKO60814 126 aa4.98□□□□□ -1.61
COPS4-210ENST00000511708 HIST1H2BJP06899 126 aa4.98□□□□□ -1.61
COPS4-210ENST00000511708 HIST1H2BOP23527 126 aa4.98□□□□□ -1.61
COPS4-210ENST00000511708 HIST1H2BBP33778 126 aa4.98□□□□□ -1.61
COPS4-210ENST00000511708 HIST1H2BDP58876 126 aa4.98□□□□□ -1.61
COPS4-210ENST00000511708 HIST1H2BCP62807 126 aa4.98□□□□□ -1.61
COPS4-210ENST00000511708 HIST2H2BEQ16778 126 aa4.98□□□□□ -1.61
COPS4-210ENST00000511708 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.98□□□□□ -1.61
COPS4-210ENST00000511708 HIST1H2BHQ93079 126 aa4.98□□□□□ -1.61
COPS4-210ENST00000511708 HIST1H2BNQ99877 126 aa4.98□□□□□ -1.61
COPS4-210ENST00000511708 HIST1H2BMQ99879 126 aa4.98□□□□□ -1.61
COPS4-210ENST00000511708 IGKV2D-30A0A075B6S6 120 aa4.97□□□□□ -1.61
COPS4-210ENST00000511708 IGKV2-30P06310 120 aa4.97□□□□□ -1.61
COPS4-210ENST00000511708 C4orf26Q17RF5 130 aa4.97□□□□□ -1.61
COPS4-210ENST00000511708 CRIPTQ9P021 101 aa4.97□□□□□ -1.61
COPS4-210ENST00000511708 SNRPEP62304 92 aaKnown RBP4.96□□□□□ -1.62
COPS4-210ENST00000511708 C7orf65Q6ZTY9 151 aa4.96□□□□□ -1.62
COPS4-210ENST00000511708 PRR15Q8IV56 129 aa4.96□□□□□ -1.62
COPS4-210ENST00000511708 LCE1DQ5T752 114 aa4.95□□□□□ -1.62
COPS4-210ENST00000511708 S4R3F8 94 aa4.95□□□□□ -1.62
COPS4-210ENST00000511708 LCA10Q71F78 164 aa4.94□□□□□ -1.62
COPS4-210ENST00000511708 PCP4L1A6NKN8 68 aa4.93□□□□□ -1.62
COPS4-210ENST00000511708 HIST1H4GQ99525 98 aa4.93□□□□□ -1.62
COPS4-210ENST00000511708 VPS25Q9BRG1 176 aa4.93□□□□□ -1.62
COPS4-210ENST00000511708 KRTAP3-1Q9BYR8 98 aa4.93□□□□□ -1.62
COPS4-210ENST00000511708 ORMDL1Q9P0S3 153 aa4.93□□□□□ -1.62
COPS4-210ENST00000511708 H3BQ85 93 aa4.92□□□□□ -1.62
COPS4-210ENST00000511708 TMEM254Q8TBM7 123 aa4.91□□□□□ -1.62
COPS4-210ENST00000511708 MRPL34Q9BQ48 92 aaKnown RBP4.91□□□□□ -1.62
COPS4-210ENST00000511708 HMCN1Q96RW7 5635 aa4.91□□□□□ -1.62
COPS4-210ENST00000511708 AHNAK2Q8IVF2 5795 aa4.9□□□□□ -1.62
COPS4-210ENST00000511708 A0A0B4J2C4 111 aa4.9□□□□□ -1.63
COPS4-210ENST00000511708 TMEM256-PLSCR3K7ERE1 68 aa4.9□□□□□ -1.63
COPS4-210ENST00000511708 Q6ZQT0 140 aa4.9□□□□□ -1.63
COPS4-210ENST00000511708 RBM3P98179 157 aaKnown RBP4.89□□□□□ -1.63
COPS4-210ENST00000511708 C21orf62-AS1Q17RA5 79 aa4.89□□□□□ -1.63
COPS4-210ENST00000511708 Q5W150 140 aa4.89□□□□□ -1.63
COPS4-210ENST00000511708 MMP24-AS1A0A0U1RRL7 71 aa4.88□□□□□ -1.63
COPS4-210ENST00000511708 COA6Q5JTJ3 125 aaKnown RBP4.88□□□□□ -1.63
COPS4-210ENST00000511708 DNAL4O96015 105 aa4.87□□□□□ -1.63
COPS4-210ENST00000511708 UBE2V1Q13404 147 aa4.87□□□□□ -1.63
COPS4-210ENST00000511708 C14orf144Q96I85 54 aa4.87□□□□□ -1.63
COPS4-210ENST00000511708 PYY3Q5JQD4 70 aa4.86□□□□□ -1.63
COPS4-210ENST00000511708 KRTAP5-10Q6L8G5 202 aa4.86□□□□□ -1.63
COPS4-210ENST00000511708 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
COPS4-210ENST00000511708 TRIAP1O43715 76 aa4.85□□□□□ -1.63
COPS4-210ENST00000511708 C9orf118A6NHY6 69 aa4.83□□□□□ -1.64
COPS4-210ENST00000511708 NDUFS5O43920 106 aa4.83□□□□□ -1.64
COPS4-210ENST00000511708 HIST3H2BBQ8N257 126 aa4.82□□□□□ -1.64
COPS4-210ENST00000511708 hDV103S1A0JD37 113 aa4.81□□□□□ -1.64
COPS4-210ENST00000511708 HSBP1L1C9JCN9 74 aa4.81□□□□□ -1.64
COPS4-210ENST00000511708 K7EQZ3 153 aa4.8□□□□□ -1.64
COPS4-210ENST00000511708 PRO1854Q9UHT4 67 aa4.8□□□□□ -1.64
COPS4-210ENST00000511708 C1orf64Q8NEQ6 169 aa4.79□□□□□ -1.64
COPS4-210ENST00000511708 A0A1B0GV90 55 aa4.78□□□□□ -1.64
COPS4-210ENST00000511708 C9JAW5 83 aa4.77□□□□□ -1.65
COPS4-210ENST00000511708 KRTAP10-7P60409 375 aaPredicted RBP4.77□□□□□ -1.65
COPS4-210ENST00000511708 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
COPS4-210ENST00000511708 COX8AP10176 69 aa4.76□□□□□ -1.65
COPS4-210ENST00000511708 S100A2P29034 98 aa4.76□□□□□ -1.65
COPS4-210ENST00000511708 PLAC4Q8WY50 150 aa4.76□□□□□ -1.65
COPS4-210ENST00000511708 HIST1H2BLQ99880 126 aa4.76□□□□□ -1.65
COPS4-210ENST00000511708 TSTD3H0UI37 97 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms