RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 KRTAP25-1Q3LHN0 102 aa4.09□□□□□ -1.76
KDM3B-207ENST00000510866 ASB16-AS1Q495Z4 193 aa4.09□□□□□ -1.76
KDM3B-207ENST00000510866 HIVEP1P15822 2718 aa4.09□□□□□ -1.76
KDM3B-207ENST00000510866 ADM2Q7Z4H4 148 aa4.08□□□□□ -1.76
KDM3B-207ENST00000510866 NOTCH2NLQ7Z3S9 236 aa4.08□□□□□ -1.76
KDM3B-207ENST00000510866 FLNCQ14315 2725 aa4.08□□□□□ -1.76
KDM3B-207ENST00000510866 KRTAP13-1Q8IUC0 172 aa4.07□□□□□ -1.76
KDM3B-207ENST00000510866 KRTAP29-1A8MX34 341 aaPredicted RBP4.05□□□□□ -1.76
KDM3B-207ENST00000510866 DMXL1Q9Y485 3027 aa4.04□□□□□ -1.76
KDM3B-207ENST00000510866 KALRNO60229 2985 aa4.04□□□□□ -1.76
KDM3B-207ENST00000510866 TACC2O95359 2948 aa4.04□□□□□ -1.76
KDM3B-207ENST00000510866 APCP25054 2843 aa4.04□□□□□ -1.76
KDM3B-207ENST00000510866 CRYBG3Q68DQ2 2970 aa4.03□□□□□ -1.76
KDM3B-207ENST00000510866 ADGRG4Q8IZF6 3080 aa4.03□□□□□ -1.76
KDM3B-207ENST00000510866 A6NN06 94 aa4.02□□□□□ -1.77
KDM3B-207ENST00000510866 REV3LO60673 3130 aa4.02□□□□□ -1.77
KDM3B-207ENST00000510866 FREM2Q5SZK8 3169 aa4.01□□□□□ -1.77
KDM3B-207ENST00000510866 NBEAQ8NFP9 2946 aa4.01□□□□□ -1.77
KDM3B-207ENST00000510866 A8MU10 97 aa3.99□□□□□ -1.77
KDM3B-207ENST00000510866 C10orf95Q9H7T3 257 aa3.99□□□□□ -1.77
KDM3B-207ENST00000510866 CFAP47Q6ZTR5 3102 aa3.98□□□□□ -1.77
KDM3B-207ENST00000510866 TENM4Q6N022 2769 aa3.97□□□□□ -1.77
KDM3B-207ENST00000510866 SPEGQ15772 3267 aa3.97□□□□□ -1.77
KDM3B-207ENST00000510866 A8MUU9 505 aa3.95□□□□□ -1.78
KDM3B-207ENST00000510866 ZZEF1O43149 2961 aa3.95□□□□□ -1.78
KDM3B-207ENST00000510866 KRTAP1-4P0C5Y4 121 aa3.92□□□□□ -1.78
KDM3B-207ENST00000510866 MYO15AQ9UKN7 3530 aa3.92□□□□□ -1.78
KDM3B-207ENST00000510866 HRNRQ86YZ3 2850 aaPredicted RBP3.92□□□□□ -1.78
KDM3B-207ENST00000510866 XP32Q5T750 250 aa3.89□□□□□ -1.79
KDM3B-207ENST00000510866 LOC400499M0QZD8 3231 aa3.89□□□□□ -1.79
KDM3B-207ENST00000510866 TENM3Q9P273 2699 aa3.88□□□□□ -1.79
KDM3B-207ENST00000510866 NIPBLQ6KC79 2804 aaeCLIP3.88□□□□□ -1.79
KDM3B-207ENST00000510866 A0A1B0GVY2 172 aa3.86□□□□□ -1.79
KDM3B-207ENST00000510866 TPRXLQ17RH7 258 aa3.85□□□□□ -1.79
KDM3B-207ENST00000510866 CELSR2Q9HCU4 2923 aa3.85□□□□□ -1.79
KDM3B-207ENST00000510866 ZANQ9Y493 2812 aa3.85□□□□□ -1.79
KDM3B-207ENST00000510866 ASH1LQ9NR48 2969 aaKnown RBP3.84□□□□□ -1.79
KDM3B-207ENST00000510866 TNP1P09430 55 aa3.84□□□□□ -1.8
KDM3B-207ENST00000510866 ASPMQ8IZT6 3477 aa3.83□□□□□ -1.8
KDM3B-207ENST00000510866 DCHS2Q6V1P9 2916 aa3.83□□□□□ -1.8
KDM3B-207ENST00000510866 NBPF19A0A087WUL8 3843 aa3.83□□□□□ -1.8
KDM3B-207ENST00000510866 RELNP78509 3460 aa3.8□□□□□ -1.8
KDM3B-207ENST00000510866 FBN2P35556 2912 aa3.79□□□□□ -1.8
KDM3B-207ENST00000510866 KRTAP13-3Q3SY46 172 aa3.78□□□□□ -1.8
KDM3B-207ENST00000510866 NF1P21359 2839 aa3.78□□□□□ -1.8
KDM3B-207ENST00000510866 TENM2Q9NT68 2774 aa3.76□□□□□ -1.81
KDM3B-207ENST00000510866 WDFY3Q8IZQ1 3526 aa3.76□□□□□ -1.81
KDM3B-207ENST00000510866 ANK3Q12955 4377 aaKnown RBP3.76□□□□□ -1.81
KDM3B-207ENST00000510866 KRTAP10-10P60014 251 aa3.75□□□□□ -1.81
KDM3B-207ENST00000510866 PDZD2O15018 2839 aa3.75□□□□□ -1.81
KDM3B-207ENST00000510866 KRTAP10-8P60410 259 aa3.75□□□□□ -1.81
KDM3B-207ENST00000510866 LAMA5O15230 3695 aa3.75□□□□□ -1.81
KDM3B-207ENST00000510866 DMDP11532 3685 aa3.74□□□□□ -1.81
KDM3B-207ENST00000510866 PP632Q6XCG6 107 aa3.73□□□□□ -1.81
KDM3B-207ENST00000510866 CELSR1Q9NYQ6 3014 aa3.72□□□□□ -1.81
KDM3B-207ENST00000510866 P0C880 135 aa3.72□□□□□ -1.81
KDM3B-207ENST00000510866 MXRA5Q9NR99 2828 aa3.71□□□□□ -1.82
KDM3B-207ENST00000510866 ZFHX4Q86UP3 3567 aa3.69□□□□□ -1.82
KDM3B-207ENST00000510866 TENM1Q9UKZ4 2725 aa3.69□□□□□ -1.82
KDM3B-207ENST00000510866 DCHS1Q96JQ0 3298 aa3.67□□□□□ -1.82
KDM3B-207ENST00000510866 OTOGQ6ZRI0 2925 aa3.63□□□□□ -1.83
KDM3B-207ENST00000510866 PRO2289Q9P1D8 64 aa3.63□□□□□ -1.83
KDM3B-207ENST00000510866 H0YAA0 97 aa3.62□□□□□ -1.83
KDM3B-207ENST00000510866 ZFHX3Q15911 3703 aa3.6□□□□□ -1.83
KDM3B-207ENST00000510866 MUC3AQ02505 3323 aa3.59□□□□□ -1.83
KDM3B-207ENST00000510866 SMG1Q96Q15 3661 aaKnown RBP3.58□□□□□ -1.84
KDM3B-207ENST00000510866 CSMD1Q96PZ7 3565 aa3.57□□□□□ -1.84
KDM3B-207ENST00000510866 FBN1P35555 2871 aaKnown RBP3.57□□□□□ -1.84
KDM3B-207ENST00000510866 BSNQ9UPA5 3926 aa3.56□□□□□ -1.84
KDM3B-207ENST00000510866 PKD1L1Q8TDX9 2849 aa3.56□□□□□ -1.84
KDM3B-207ENST00000510866 TGP01266 2768 aa3.55□□□□□ -1.84
KDM3B-207ENST00000510866 SPENQ96T58 3664 aaKnown RBP3.55□□□□□ -1.84
KDM3B-207ENST00000510866 HUWE1Q7Z6Z7 4374 aaKnown RBP3.53□□□□□ -1.84
KDM3B-207ENST00000510866 ALMS1Q8TCU4 4167 aa3.52□□□□□ -1.85
KDM3B-207ENST00000510866 SRRM2Q9UQ35 2752 aaKnown RBP3.52□□□□□ -1.85
KDM3B-207ENST00000510866 CSMD2Q7Z408 3487 aa3.51□□□□□ -1.85
KDM3B-207ENST00000510866 VWFP04275 2813 aa3.5□□□□□ -1.85
KDM3B-207ENST00000510866 TRRAPQ9Y4A5 3859 aa3.48□□□□□ -1.85
KDM3B-207ENST00000510866 SVEP1Q4LDE5 3571 aa3.47□□□□□ -1.85
KDM3B-207ENST00000510866 MT1HL1P0DM35 61 aa3.47□□□□□ -1.85
KDM3B-207ENST00000510866 KRTAP4-5Q9BYR2 181 aa3.46□□□□□ -1.86
KDM3B-207ENST00000510866 KRTAP12-2P59991 146 aa3.46□□□□□ -1.86
KDM3B-207ENST00000510866 KRTAP23-1A1A580 65 aa3.41□□□□□ -1.86
KDM3B-207ENST00000510866 KRTAP3-1Q9BYR8 98 aa3.41□□□□□ -1.86
KDM3B-207ENST00000510866 AKAP9Q99996 3911 aa3.38□□□□□ -1.87
KDM3B-207ENST00000510866 KRTAP10-4P60372 401 aaPredicted RBP3.38□□□□□ -1.87
KDM3B-207ENST00000510866 DNAH9Q9NYC9 4486 aa3.36□□□□□ -1.87
KDM3B-207ENST00000510866 KRTAP13-4Q3LI77 160 aa3.35□□□□□ -1.87
KDM3B-207ENST00000510866 VPS13CQ709C8 3753 aa3.35□□□□□ -1.87
KDM3B-207ENST00000510866 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
KDM3B-207ENST00000510866 KRTAP15-1Q3LI76 137 aa3.34□□□□□ -1.87
KDM3B-207ENST00000510866 INE1O15225 51 aa3.32□□□□□ -1.88
KDM3B-207ENST00000510866 FBN3Q75N90 2809 aa3.31□□□□□ -1.88
KDM3B-207ENST00000510866 CUBNO60494 3623 aa3.29□□□□□ -1.88
KDM3B-207ENST00000510866 MEGF8Q7Z7M0 2845 aa3.28□□□□□ -1.88
KDM3B-207ENST00000510866 KRTAP10-6P60371 365 aaPredicted RBP3.27□□□□□ -1.89
KDM3B-207ENST00000510866 ZNF469Q96JG9 3925 aaPredicted RBP3.26□□□□□ -1.89
KDM3B-207ENST00000510866 COL7A1Q02388 2944 aa3.24□□□□□ -1.89
KDM3B-207ENST00000510866 DNAH1Q9P2D7 4330 aa3.24□□□□□ -1.89
KDM3B-207ENST00000510866 CRCT1Q9UGL9 99 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms