RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 C1orf64Q8NEQ6 169 aa9.75□□□□□ -0.85
CLMAT3-201ENST00000510576 FAT2Q9NYQ8 4349 aa9.74□□□□□ -0.85
CLMAT3-201ENST00000510576 FAM229BQ4G0N7 80 aa9.74□□□□□ -0.85
CLMAT3-201ENST00000510576 CYP4F30PQ9H0H9 118 aa9.74□□□□□ -0.85
CLMAT3-201ENST00000510576 RYR3Q15413 4870 aa9.73□□□□□ -0.85
CLMAT3-201ENST00000510576 SPINK6Q6UWN8 80 aa9.72□□□□□ -0.85
CLMAT3-201ENST00000510576 NDUFS5O43920 106 aa9.71□□□□□ -0.86
CLMAT3-201ENST00000510576 PRR4Q16378 134 aa9.71□□□□□ -0.86
CLMAT3-201ENST00000510576 MRPL34Q9BQ48 92 aaKnown RBP9.71□□□□□ -0.86
CLMAT3-201ENST00000510576 A0A087X002 238 aa9.68□□□□□ -0.86
CLMAT3-201ENST00000510576 SPANXA2-OT1Q8N9U9 137 aa9.68□□□□□ -0.86
CLMAT3-201ENST00000510576 NOTCH2NLQ7Z3S9 236 aa9.68□□□□□ -0.86
CLMAT3-201ENST00000510576 KRTAP13-2Q52LG2 175 aa9.67□□□□□ -0.86
CLMAT3-201ENST00000510576 LRP1BQ9NZR2 4599 aa9.64□□□□□ -0.87
CLMAT3-201ENST00000510576 MPLKIPQ8TAP9 179 aa9.63□□□□□ -0.87
CLMAT3-201ENST00000510576 C8orf87E5RJ46 101 aa9.62□□□□□ -0.87
CLMAT3-201ENST00000510576 KRTAP1-4P0C5Y4 121 aa9.6□□□□□ -0.87
CLMAT3-201ENST00000510576 PCOTHQ58A44 107 aa9.57□□□□□ -0.88
CLMAT3-201ENST00000510576 C1orf195Q5TG92 126 aa9.56□□□□□ -0.88
CLMAT3-201ENST00000510576 IGLV7-46A0A075B6I9 117 aa9.55□□□□□ -0.88
CLMAT3-201ENST00000510576 LIMD2Q9BT23 127 aa9.55□□□□□ -0.88
CLMAT3-201ENST00000510576 VPS13BQ7Z7G8 4022 aa9.55□□□□□ -0.88
CLMAT3-201ENST00000510576 LINC00336Q6ZUF6 198 aa9.54□□□□□ -0.88
CLMAT3-201ENST00000510576 PLA2G1BP04054 148 aaKnown RBP9.53□□□□□ -0.88
CLMAT3-201ENST00000510576 LINC00313P59037 77 aa9.53□□□□□ -0.88
CLMAT3-201ENST00000510576 Q1T7F1 81 aa9.52□□□□□ -0.89
CLMAT3-201ENST00000510576 LOC101927531A0A1B0GV80 90 aa9.51□□□□□ -0.89
CLMAT3-201ENST00000510576 TYMSOSQ8TAI1 123 aa9.51□□□□□ -0.89
CLMAT3-201ENST00000510576 C4orf48Q5BLP8 95 aa9.5□□□□□ -0.89
CLMAT3-201ENST00000510576 KRTAP13-3Q3SY46 172 aa9.49□□□□□ -0.89
CLMAT3-201ENST00000510576 Q5W150 140 aa9.49□□□□□ -0.89
CLMAT3-201ENST00000510576 PKHD1P08F94 4074 aa9.49□□□□□ -0.89
CLMAT3-201ENST00000510576 COA5Q86WW8 74 aa9.45□□□□□ -0.9
CLMAT3-201ENST00000510576 Q8N9P0 234 aaPredicted RBP9.44□□□□□ -0.9
CLMAT3-201ENST00000510576 SPINK1P00995 79 aa9.44□□□□□ -0.9
CLMAT3-201ENST00000510576 V9GYY9 64 aa9.44□□□□□ -0.9
CLMAT3-201ENST00000510576 FAM229AH3BQW9 127 aa9.43□□□□□ -0.9
CLMAT3-201ENST00000510576 A0A1B0GVY2 172 aa9.41□□□□□ -0.9
CLMAT3-201ENST00000510576 KRTAP16-1A8MUX0 517 aa9.41□□□□□ -0.9
CLMAT3-201ENST00000510576 SMR3BP02814 79 aaPredicted RBP9.39□□□□□ -0.91
CLMAT3-201ENST00000510576 PRR26Q8N8Z3 221 aa9.39□□□□□ -0.91
CLMAT3-201ENST00000510576 EPPK1P58107 5090 aaKnown RBP9.39□□□□□ -0.91
CLMAT3-201ENST00000510576 DYNC1H1Q14204 4646 aaKnown RBP9.38□□□□□ -0.91
CLMAT3-201ENST00000510576 LINC00304Q8N9R0 145 aa9.38□□□□□ -0.91
CLMAT3-201ENST00000510576 PRO0628Q9UI54 55 aa9.38□□□□□ -0.91
CLMAT3-201ENST00000510576 PSPHP1O15172 72 aa9.37□□□□□ -0.91
CLMAT3-201ENST00000510576 BRK1Q8WUW1 75 aa9.37□□□□□ -0.91
CLMAT3-201ENST00000510576 RETNLBQ9BQ08 111 aa9.36□□□□□ -0.91
CLMAT3-201ENST00000510576 RPS29P62273 56 aaKnown RBP9.35□□□□□ -0.91
CLMAT3-201ENST00000510576 SPAG11AQ6PDA7 123 aa9.35□□□□□ -0.91
CLMAT3-201ENST00000510576 HRES1P13985 223 aa9.33□□□□□ -0.92
CLMAT3-201ENST00000510576 A8MUN3 132 aa9.32□□□□□ -0.92
CLMAT3-201ENST00000510576 IGKV2-30P06310 120 aa9.32□□□□□ -0.92
CLMAT3-201ENST00000510576 APOBP04114 4563 aaKnown RBP9.29□□□□□ -0.92
CLMAT3-201ENST00000510576 KRTAP10-4P60372 401 aaPredicted RBP9.28□□□□□ -0.92
CLMAT3-201ENST00000510576 PRR15LQ9BU68 103 aa9.26□□□□□ -0.93
CLMAT3-201ENST00000510576 Q5VV11 94 aa9.26□□□□□ -0.93
CLMAT3-201ENST00000510576 ACYP2P14621 99 aa9.25□□□□□ -0.93
CLMAT3-201ENST00000510576 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
CLMAT3-201ENST00000510576 IGKV2D-30A0A075B6S6 120 aa9.21□□□□□ -0.93
CLMAT3-201ENST00000510576 LINC01558Q9Y6Z2 57 aa9.21□□□□□ -0.94
CLMAT3-201ENST00000510576 PKHD1L1Q86WI1 4243 aa9.19□□□□□ -0.94
CLMAT3-201ENST00000510576 FAT1Q14517 4588 aa9.19□□□□□ -0.94
CLMAT3-201ENST00000510576 CHKB-CPT1BH3BT56 60 aa9.18□□□□□ -0.94
CLMAT3-201ENST00000510576 Q75L30 129 aa9.17□□□□□ -0.94
CLMAT3-201ENST00000510576 KIAA1109Q2LD37 5005 aa9.16□□□□□ -0.94
CLMAT3-201ENST00000510576 C7orf65Q6ZTY9 151 aa9.11□□□□□ -0.95
CLMAT3-201ENST00000510576 HSPG2P98160 4391 aa9.1□□□□□ -0.95
CLMAT3-201ENST00000510576 C9orf92A6NGG3 77 aa9.1□□□□□ -0.95
CLMAT3-201ENST00000510576 RYR1P21817 5038 aa9.09□□□□□ -0.95
CLMAT3-201ENST00000510576 BIRC6Q9NR09 4857 aa9.07□□□□□ -0.96
CLMAT3-201ENST00000510576 A6NED7 52 aa9.07□□□□□ -0.96
CLMAT3-201ENST00000510576 C20orf166-AS1Q96NR2 134 aa9.07□□□□□ -0.96
CLMAT3-201ENST00000510576 A8MUU9 505 aa9.06□□□□□ -0.96
CLMAT3-201ENST00000510576 KRTAP17-1Q9BYP8 105 aa9.03□□□□□ -0.96
CLMAT3-201ENST00000510576 A8MU10 97 aa9.01□□□□□ -0.97
CLMAT3-201ENST00000510576 Q5VSD8 79 aa8.99□□□□□ -0.97
CLMAT3-201ENST00000510576 LCA10Q71F78 164 aa8.97□□□□□ -0.97
CLMAT3-201ENST00000510576 Q8N1X5 172 aa8.97□□□□□ -0.97
CLMAT3-201ENST00000510576 CDC42SE1Q9NRR8 79 aa8.96□□□□□ -0.98
CLMAT3-201ENST00000510576 FLG2Q5D862 2391 aaPredicted RBP8.96□□□□□ -0.98
CLMAT3-201ENST00000510576 SPINK7P58062 85 aa8.95□□□□□ -0.98
CLMAT3-201ENST00000510576 KRTAP10-8P60410 259 aa8.94□□□□□ -0.98
CLMAT3-201ENST00000510576 A0A1B0GU69 56 aa8.93□□□□□ -0.98
CLMAT3-201ENST00000510576 HERC2O95714 4834 aa8.91□□□□□ -0.98
CLMAT3-201ENST00000510576 TNXBP22105 4242 aa8.9□□□□□ -0.98
CLMAT3-201ENST00000510576 ATP11AUNQ6ZP68 121 aa8.88□□□□□ -0.99
CLMAT3-201ENST00000510576 SPTSSBQ8NFR3 76 aa8.88□□□□□ -0.99
CLMAT3-201ENST00000510576 FAT3Q8TDW7 4589 aa8.87□□□□□ -0.99
CLMAT3-201ENST00000510576 LRP1Q07954 4544 aaKnown RBP8.85□□□□□ -0.99
CLMAT3-201ENST00000510576 PMAIP1Q13794 54 aa8.84□□□□□ -0.99
CLMAT3-201ENST00000510576 KRTAP4-5Q9BYR2 181 aa8.84□□□□□ -0.99
CLMAT3-201ENST00000510576 ABCA13Q86UQ4 5058 aa8.81□□□□□ -1
CLMAT3-201ENST00000510576 MYCBP2O75592 4640 aa8.78□□□□□ -1
CLMAT3-201ENST00000510576 KRTAP3-1Q9BYR8 98 aa8.77□□□□□ -1
CLMAT3-201ENST00000510576 UQCR11O14957 56 aa8.73□□□□□ -1.01
CLMAT3-201ENST00000510576 PCLOQ9Y6V0 5065 aa8.73□□□□□ -1.01
CLMAT3-201ENST00000510576 SEC61GP60059 68 aa8.73□□□□□ -1.01
CLMAT3-201ENST00000510576 RPL37P61927 97 aaKnown RBP8.73□□□□□ -1.01
CLMAT3-201ENST00000510576 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms