RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 TSTD3H0UI37 97 aa9.48□□□□□ -0.89
LSM6-206ENST00000510331 BATFQ16520 125 aa9.48□□□□□ -0.89
LSM6-206ENST00000510331 Q6ZQT0 140 aa9.47□□□□□ -0.89
LSM6-206ENST00000510331 C8orf87E5RJ46 101 aa9.45□□□□□ -0.9
LSM6-206ENST00000510331 TRBV20-1A0A075B6N2 111 aa9.44□□□□□ -0.9
LSM6-206ENST00000510331 LOC110117498A0A087WWA1 95 aa9.44□□□□□ -0.9
LSM6-206ENST00000510331 JMJD7-PLA2G4BH0Y9G9 81 aa9.44□□□□□ -0.9
LSM6-206ENST00000510331 LYRM7Q5U5X0 104 aa9.44□□□□□ -0.9
LSM6-206ENST00000510331 C21orf62-AS1Q17RA5 79 aa9.43□□□□□ -0.9
LSM6-206ENST00000510331 C14orf132Q9NPU4 83 aa9.43□□□□□ -0.9
LSM6-206ENST00000510331 J3KT08 172 aa9.42□□□□□ -0.9
LSM6-206ENST00000510331 LOC105371267A0A1B0GV96 52 aa9.41□□□□□ -0.9
LSM6-206ENST00000510331 HRES1P13985 223 aa9.37□□□□□ -0.91
LSM6-206ENST00000510331 CRCT1Q9UGL9 99 aa9.37□□□□□ -0.91
LSM6-206ENST00000510331 PDE6GP18545 87 aa9.36□□□□□ -0.91
LSM6-206ENST00000510331 MTURNQ8N3F0 131 aa9.35□□□□□ -0.91
LSM6-206ENST00000510331 A0A1B0GW54 56 aa9.34□□□□□ -0.91
LSM6-206ENST00000510331 C9orf118A6NHY6 69 aa9.34□□□□□ -0.91
LSM6-206ENST00000510331 A8MWP4 228 aa9.34□□□□□ -0.91
LSM6-206ENST00000510331 TAX1BP3O14907 124 aa9.34□□□□□ -0.91
LSM6-206ENST00000510331 MPLKIPQ8TAP9 179 aa9.34□□□□□ -0.91
LSM6-206ENST00000510331 FAM236DA0A1B0GTK5 79 aa9.33□□□□□ -0.92
LSM6-206ENST00000510331 NDUFB1O75438 58 aa9.33□□□□□ -0.92
LSM6-206ENST00000510331 FAM236CP0DP71 79 aa9.33□□□□□ -0.92
LSM6-206ENST00000510331 ZCCHC13Q8WW36 166 aaKnown RBP9.33□□□□□ -0.92
LSM6-206ENST00000510331 IGKV3D-7A0A0C4DH55 119 aa9.32□□□□□ -0.92
LSM6-206ENST00000510331 C8orf17Q9NRJ1 99 aa9.32□□□□□ -0.92
LSM6-206ENST00000510331 A0A1W2PPM0 123 aa9.31□□□□□ -0.92
LSM6-206ENST00000510331 H3BT86 120 aa9.29□□□□□ -0.92
LSM6-206ENST00000510331 Q8N9P0 234 aaPredicted RBP9.29□□□□□ -0.92
LSM6-206ENST00000510331 RBM12B-AS1Q9P1G2 102 aa9.29□□□□□ -0.92
LSM6-206ENST00000510331 NREPQ16612 68 aa9.25□□□□□ -0.93
LSM6-206ENST00000510331 KRTAP9-8Q9BYQ0 159 aa9.25□□□□□ -0.93
LSM6-206ENST00000510331 PRR15Q8IV56 129 aa9.24□□□□□ -0.93
LSM6-206ENST00000510331 Q6ZVQ6 151 aa9.23□□□□□ -0.93
LSM6-206ENST00000510331 MMP24-AS1A0A0U1RRL7 71 aa9.22□□□□□ -0.93
LSM6-206ENST00000510331 SPINK7P58062 85 aa9.22□□□□□ -0.93
LSM6-206ENST00000510331 K7EQZ3 153 aa9.2□□□□□ -0.94
LSM6-206ENST00000510331 SPCS1Q9Y6A9 102 aa9.19□□□□□ -0.94
LSM6-206ENST00000510331 MT2AP02795 61 aa9.16□□□□□ -0.94
LSM6-206ENST00000510331 TMEM254Q8TBM7 123 aa9.16□□□□□ -0.94
LSM6-206ENST00000510331 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.94
LSM6-206ENST00000510331 WFDC13Q8IUB5 93 aa9.14□□□□□ -0.95
LSM6-206ENST00000510331 SMCPP49901 116 aaPredicted RBP9.13□□□□□ -0.95
LSM6-206ENST00000510331 USH2AO75445 5202 aa9.12□□□□□ -0.95
LSM6-206ENST00000510331 hDV103S1A0JD37 113 aa9.11□□□□□ -0.95
LSM6-206ENST00000510331 BPY2O14599 106 aa9.11□□□□□ -0.95
LSM6-206ENST00000510331 MT1FP04733 61 aa9.1□□□□□ -0.95
LSM6-206ENST00000510331 COL5A1-AS1Q5SY13 56 aa9.09□□□□□ -0.95
LSM6-206ENST00000510331 NDUFS5O43920 106 aa9.08□□□□□ -0.96
LSM6-206ENST00000510331 Q8N9L7 120 aa9.08□□□□□ -0.96
LSM6-206ENST00000510331 PRO0461Q9UI25 63 aa9.07□□□□□ -0.96
LSM6-206ENST00000510331 SSPOA2VEC9 5147 aa9.06□□□□□ -0.96
LSM6-206ENST00000510331 K7EP34 96 aa9.05□□□□□ -0.96
LSM6-206ENST00000510331 LCE2BO14633 110 aa9□□□□□ -0.97
LSM6-206ENST00000510331 KRTAP10-10P60014 251 aa9□□□□□ -0.97
LSM6-206ENST00000510331 CASC2Q6XLA1 102 aa8.99□□□□□ -0.97
LSM6-206ENST00000510331 LINC00846Q9NV44 126 aa8.99□□□□□ -0.97
LSM6-206ENST00000510331 Q5W150 140 aa8.98□□□□□ -0.97
LSM6-206ENST00000510331 IGKV2D-30A0A075B6S6 120 aa8.97□□□□□ -0.97
LSM6-206ENST00000510331 IGKV2-30P06310 120 aa8.97□□□□□ -0.97
LSM6-206ENST00000510331 KRTAP9-3Q9BYQ3 159 aa8.96□□□□□ -0.98
LSM6-206ENST00000510331 HCG22E2RYF7 251 aa8.95□□□□□ -0.98
LSM6-206ENST00000510331 UBL5Q9BZL1 73 aa8.94□□□□□ -0.98
LSM6-206ENST00000510331 C7orf65Q6ZTY9 151 aa8.93□□□□□ -0.98
LSM6-206ENST00000510331 PCP4L1A6NKN8 68 aa8.9□□□□□ -0.98
LSM6-206ENST00000510331 H1FX-AS1Q4G0G2 97 aa8.88□□□□□ -0.99
LSM6-206ENST00000510331 GTF2H5Q6ZYL4 71 aa8.88□□□□□ -0.99
LSM6-206ENST00000510331 CXCL6P80162 114 aa8.86□□□□□ -0.99
LSM6-206ENST00000510331 ETDBQ3ZM63 59 aa8.83□□□□□ -1
LSM6-206ENST00000510331 F8W1H4 67 aa8.81□□□□□ -1
LSM6-206ENST00000510331 C4orf26Q17RF5 130 aa8.8□□□□□ -1
LSM6-206ENST00000510331 FCGBPQ9Y6R7 5405 aaPredicted RBP8.8□□□□□ -1
LSM6-206ENST00000510331 KRTAP19-1Q8IUB9 90 aa8.77□□□□□ -1.01
LSM6-206ENST00000510331 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.75□□□□□ -1.01
LSM6-206ENST00000510331 KRTAP3-1Q9BYR8 98 aa8.68□□□□□ -1.02
LSM6-206ENST00000510331 TP53AIP1Q9HCN2 124 aa8.67□□□□□ -1.02
LSM6-206ENST00000510331 C5orf47Q569G3 176 aa8.63□□□□□ -1.03
LSM6-206ENST00000510331 KRTAP9-7A8MTY7 169 aa8.62□□□□□ -1.03
LSM6-206ENST00000510331 C1orf64Q8NEQ6 169 aa8.62□□□□□ -1.03
LSM6-206ENST00000510331 S4R3F8 94 aa8.61□□□□□ -1.03
LSM6-206ENST00000510331 KRTAP19-6Q3LI70 58 aa8.6□□□□□ -1.03
LSM6-206ENST00000510331 MACF1Q9UPN3 7388 aaKnown RBP8.57□□□□□ -1.04
LSM6-206ENST00000510331 FAM240AA0A1B0GVK7 77 aa8.57□□□□□ -1.04
LSM6-206ENST00000510331 ACYP1P07311 99 aa8.57□□□□□ -1.04
LSM6-206ENST00000510331 LCA10Q71F78 164 aa8.56□□□□□ -1.04
LSM6-206ENST00000510331 ATP5EP2Q5VTU8 51 aa8.55□□□□□ -1.04
LSM6-206ENST00000510331 TRAV22A0A0B4J277 110 aa8.54□□□□□ -1.04
LSM6-206ENST00000510331 CYP4F30PQ9H0H9 118 aa8.53□□□□□ -1.04
LSM6-206ENST00000510331 SYNE2Q8WXH0 6885 aaKnown RBP8.51□□□□□ -1.05
LSM6-206ENST00000510331 FAM236AA0A1B0GUQ0 79 aa8.51□□□□□ -1.05
LSM6-206ENST00000510331 FAM236BA0A1B0GV22 79 aa8.51□□□□□ -1.05
LSM6-206ENST00000510331 HIST1H4AP62805 103 aaKnown RBP8.51□□□□□ -1.05
LSM6-206ENST00000510331 CSAG1Q6PB30 78 aa8.49□□□□□ -1.05
LSM6-206ENST00000510331 LOC101927531A0A1B0GV80 90 aa8.48□□□□□ -1.05
LSM6-206ENST00000510331 A0A087WVE0 104 aa8.45□□□□□ -1.06
LSM6-206ENST00000510331 A0A1B0GV90 55 aa8.41□□□□□ -1.06
LSM6-206ENST00000510331 H0Y9P7 68 aa8.41□□□□□ -1.06
LSM6-206ENST00000510331 UQCRQO14949 82 aa8.41□□□□□ -1.06
LSM6-206ENST00000510331 LINC00643Q86TS7 51 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms