RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 IGKV4-1P06312 121 aa7.75□□□□□ -1.17
RAB40C-202ENST00000509637 LINC00472Q9H8W2 130 aa7.74□□□□□ -1.17
RAB40C-202ENST00000509637 H3BQ85 93 aa7.73□□□□□ -1.17
RAB40C-202ENST00000509637 SYNE2Q8WXH0 6885 aaKnown RBP7.72□□□□□ -1.17
RAB40C-202ENST00000509637 FABP2P12104 132 aa7.72□□□□□ -1.17
RAB40C-202ENST00000509637 LYRM7Q5U5X0 104 aa7.72□□□□□ -1.17
RAB40C-202ENST00000509637 ORMDL1Q9P0S3 153 aa7.72□□□□□ -1.17
RAB40C-202ENST00000509637 TRACP01848 142 aa7.71□□□□□ -1.18
RAB40C-202ENST00000509637 RBM12B-AS1Q9P1G2 102 aa7.71□□□□□ -1.18
RAB40C-202ENST00000509637 A0A1B0GV72 72 aa7.7□□□□□ -1.18
RAB40C-202ENST00000509637 NAA38Q9BRA0 125 aaKnown RBP7.7□□□□□ -1.18
RAB40C-202ENST00000509637 TMEM256-PLSCR3K7ERE1 68 aa7.69□□□□□ -1.18
RAB40C-202ENST00000509637 ATXN8Q156A1 80 aa7.68□□□□□ -1.18
RAB40C-202ENST00000509637 TRBV7-4A0A0J9YYF1 115 aa7.67□□□□□ -1.18
RAB40C-202ENST00000509637 C9orf118A6NHY6 69 aa7.67□□□□□ -1.18
RAB40C-202ENST00000509637 IGHV6-1A0A0B4J1U7 121 aa7.66□□□□□ -1.18
RAB40C-202ENST00000509637 PCP4L1A6NKN8 68 aa7.66□□□□□ -1.18
RAB40C-202ENST00000509637 TAX1BP3O14907 124 aa7.66□□□□□ -1.18
RAB40C-202ENST00000509637 ANKRD29Q8N6D5 301 aa7.65□□□□□ -1.18
RAB40C-202ENST00000509637 COL5A1-AS1Q5SY13 56 aa7.64□□□□□ -1.19
RAB40C-202ENST00000509637 UBE2V1Q13404 147 aa7.63□□□□□ -1.19
RAB40C-202ENST00000509637 A0A1W2PPM0 123 aa7.62□□□□□ -1.19
RAB40C-202ENST00000509637 BAALC-AS2P0C853 105 aa7.61□□□□□ -1.19
RAB40C-202ENST00000509637 SPINK7P58062 85 aa7.61□□□□□ -1.19
RAB40C-202ENST00000509637 ZCCHC13Q8WW36 166 aaKnown RBP7.59□□□□□ -1.19
RAB40C-202ENST00000509637 A0A1B0GVX0 72 aa7.58□□□□□ -1.2
RAB40C-202ENST00000509637 CCKP06307 115 aa7.58□□□□□ -1.2
RAB40C-202ENST00000509637 KRTAP6-3Q3LI67 103 aa7.58□□□□□ -1.2
RAB40C-202ENST00000509637 Q8N9P0 234 aaPredicted RBP7.57□□□□□ -1.2
RAB40C-202ENST00000509637 C9JAW5 83 aa7.56□□□□□ -1.2
RAB40C-202ENST00000509637 RBM3P98179 157 aaKnown RBP7.55□□□□□ -1.2
RAB40C-202ENST00000509637 DSCR8Q96T75 97 aa7.55□□□□□ -1.2
RAB40C-202ENST00000509637 SPCS1Q9Y6A9 102 aa7.55□□□□□ -1.2
RAB40C-202ENST00000509637 C8orf87E5RJ46 101 aa7.54□□□□□ -1.2
RAB40C-202ENST00000509637 JMJD7-PLA2G4BH0Y9G9 81 aa7.53□□□□□ -1.2
RAB40C-202ENST00000509637 A8MWP4 228 aa7.51□□□□□ -1.21
RAB40C-202ENST00000509637 H3BT86 120 aa7.51□□□□□ -1.21
RAB40C-202ENST00000509637 WFDC13Q8IUB5 93 aa7.5□□□□□ -1.21
RAB40C-202ENST00000509637 MTURNQ8N3F0 131 aa7.5□□□□□ -1.21
RAB40C-202ENST00000509637 LINC00846Q9NV44 126 aa7.5□□□□□ -1.21
RAB40C-202ENST00000509637 VPS25Q9BRG1 176 aa7.48□□□□□ -1.21
RAB40C-202ENST00000509637 K7EP34 96 aa7.47□□□□□ -1.21
RAB40C-202ENST00000509637 PDE6GP18545 87 aa7.47□□□□□ -1.21
RAB40C-202ENST00000509637 GTF2H5Q6ZYL4 71 aa7.46□□□□□ -1.22
RAB40C-202ENST00000509637 C21orf62-AS1Q17RA5 79 aa7.45□□□□□ -1.22
RAB40C-202ENST00000509637 LOC110117498A0A087WWA1 95 aa7.44□□□□□ -1.22
RAB40C-202ENST00000509637 C14orf132Q9NPU4 83 aa7.43□□□□□ -1.22
RAB40C-202ENST00000509637 Q6ZQT0 140 aa7.42□□□□□ -1.22
RAB40C-202ENST00000509637 C8orf17Q9NRJ1 99 aa7.42□□□□□ -1.22
RAB40C-202ENST00000509637 A0A1B0GW54 56 aa7.41□□□□□ -1.22
RAB40C-202ENST00000509637 IGKV3D-7A0A0C4DH55 119 aa7.4□□□□□ -1.22
RAB40C-202ENST00000509637 J3KT08 172 aa7.38□□□□□ -1.23
RAB40C-202ENST00000509637 SMCPP49901 116 aaPredicted RBP7.38□□□□□ -1.23
RAB40C-202ENST00000509637 PRO0461Q9UI25 63 aa7.38□□□□□ -1.23
RAB40C-202ENST00000509637 F8W1H4 67 aa7.36□□□□□ -1.23
RAB40C-202ENST00000509637 H1FX-AS1Q4G0G2 97 aa7.35□□□□□ -1.23
RAB40C-202ENST00000509637 Q6ZVQ6 151 aa7.33□□□□□ -1.24
RAB40C-202ENST00000509637 NEBP20929 6669 aa7.32□□□□□ -1.24
RAB40C-202ENST00000509637 NDUFB1O75438 58 aa7.31□□□□□ -1.24
RAB40C-202ENST00000509637 MT1BP07438 61 aa7.31□□□□□ -1.24
RAB40C-202ENST00000509637 MMP24-AS1A0A0U1RRL7 71 aa7.29□□□□□ -1.24
RAB40C-202ENST00000509637 NREPQ16612 68 aa7.29□□□□□ -1.24
RAB40C-202ENST00000509637 PRR15Q8IV56 129 aa7.28□□□□□ -1.24
RAB40C-202ENST00000509637 Q5W150 140 aa7.27□□□□□ -1.25
RAB40C-202ENST00000509637 ETDBQ3ZM63 59 aa7.26□□□□□ -1.25
RAB40C-202ENST00000509637 MRPL34Q9BQ48 92 aaKnown RBP7.25□□□□□ -1.25
RAB40C-202ENST00000509637 MUC12Q9UKN1 5478 aa7.24□□□□□ -1.25
RAB40C-202ENST00000509637 A0A1B0GV90 55 aa7.24□□□□□ -1.25
RAB40C-202ENST00000509637 TMEM254Q8TBM7 123 aa7.23□□□□□ -1.25
RAB40C-202ENST00000509637 UBL5Q9BZL1 73 aa7.2□□□□□ -1.26
RAB40C-202ENST00000509637 A6NN06 94 aa7.19□□□□□ -1.26
RAB40C-202ENST00000509637 IGKV2D-30A0A075B6S6 120 aa7.18□□□□□ -1.26
RAB40C-202ENST00000509637 K7EQZ3 153 aa7.18□□□□□ -1.26
RAB40C-202ENST00000509637 BPY2O14599 106 aa7.18□□□□□ -1.26
RAB40C-202ENST00000509637 IGKV2-30P06310 120 aa7.18□□□□□ -1.26
RAB40C-202ENST00000509637 KRTAP19-8Q3LI54 63 aa7.17□□□□□ -1.26
RAB40C-202ENST00000509637 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
RAB40C-202ENST00000509637 hDV103S1A0JD37 113 aa7.16□□□□□ -1.26
RAB40C-202ENST00000509637 C4orf26Q17RF5 130 aa7.15□□□□□ -1.26
RAB40C-202ENST00000509637 KRTAP20-1Q3LI63 56 aa7.15□□□□□ -1.26
RAB40C-202ENST00000509637 NDUFS5O43920 106 aa7.13□□□□□ -1.27
RAB40C-202ENST00000509637 KRTAP10-5P60370 271 aa7.13□□□□□ -1.27
RAB40C-202ENST00000509637 C5orf47Q569G3 176 aa7.13□□□□□ -1.27
RAB40C-202ENST00000509637 ACYP1P07311 99 aa7.12□□□□□ -1.27
RAB40C-202ENST00000509637 SPRR2GQ9BYE4 73 aa7.12□□□□□ -1.27
RAB40C-202ENST00000509637 KRTAP5-9P26371 169 aa7.11□□□□□ -1.27
RAB40C-202ENST00000509637 C7orf65Q6ZTY9 151 aa7.11□□□□□ -1.27
RAB40C-202ENST00000509637 FAM240AA0A1B0GVK7 77 aa7.09□□□□□ -1.27
RAB40C-202ENST00000509637 Q5VV11 94 aa7.09□□□□□ -1.27
RAB40C-202ENST00000509637 Q8N9L7 120 aa7.06□□□□□ -1.28
RAB40C-202ENST00000509637 CXCL6P80162 114 aa7.05□□□□□ -1.28
RAB40C-202ENST00000509637 FAM236AA0A1B0GUQ0 79 aa7.03□□□□□ -1.28
RAB40C-202ENST00000509637 FAM236BA0A1B0GV22 79 aa7.03□□□□□ -1.28
RAB40C-202ENST00000509637 KMT2DO14686 5537 aa7.03□□□□□ -1.28
RAB40C-202ENST00000509637 HCG22E2RYF7 251 aa7.02□□□□□ -1.29
RAB40C-202ENST00000509637 J3QR89 54 aa7.02□□□□□ -1.29
RAB40C-202ENST00000509637 CASC2Q6XLA1 102 aa7.01□□□□□ -1.29
RAB40C-202ENST00000509637 LCA10Q71F78 164 aa7□□□□□ -1.29
RAB40C-202ENST00000509637 ATP5EP2Q5VTU8 51 aa6.99□□□□□ -1.29
RAB40C-202ENST00000509637 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms