RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 GCN1Q92616 2671 aaKnown RBP4.94□□□□□ -1.62
KLHL3-209ENST00000508657 MUC3AQ02505 3323 aa4.94□□□□□ -1.62
KLHL3-209ENST00000508657 NBEAL2Q6ZNJ1 2754 aa4.93□□□□□ -1.62
KLHL3-209ENST00000508657 DSPP15924 2871 aaKnown RBP4.92□□□□□ -1.62
KLHL3-209ENST00000508657 SPENQ96T58 3664 aaKnown RBP4.92□□□□□ -1.62
KLHL3-209ENST00000508657 LAMA5O15230 3695 aa4.92□□□□□ -1.62
KLHL3-209ENST00000508657 MAP1AP78559 2803 aaPredicted RBP4.9□□□□□ -1.63
KLHL3-209ENST00000508657 FRYLO94915 3013 aa4.9□□□□□ -1.63
KLHL3-209ENST00000508657 KRTAP4-16G5E9R7 235 aaPredicted RBP4.9□□□□□ -1.63
KLHL3-209ENST00000508657 LOC400499M0QZD8 3231 aa4.88□□□□□ -1.63
KLHL3-209ENST00000508657 RPS29P62273 56 aaKnown RBP4.88□□□□□ -1.63
KLHL3-209ENST00000508657 XP32Q5T750 250 aa4.88□□□□□ -1.63
KLHL3-209ENST00000508657 ZFHX4Q86UP3 3567 aa4.87□□□□□ -1.63
KLHL3-209ENST00000508657 KRTAP29-1A8MX34 341 aaPredicted RBP4.86□□□□□ -1.63
KLHL3-209ENST00000508657 DMXL2Q8TDJ6 3036 aa4.86□□□□□ -1.63
KLHL3-209ENST00000508657 P0C880 135 aa4.85□□□□□ -1.63
KLHL3-209ENST00000508657 KRTAP7-1Q8IUC3 87 aa4.85□□□□□ -1.63
KLHL3-209ENST00000508657 UBR5O95071 2799 aaPredicted RBP4.85□□□□□ -1.63
KLHL3-209ENST00000508657 PRO2289Q9P1D8 64 aa4.85□□□□□ -1.63
KLHL3-209ENST00000508657 TACC2O95359 2948 aa4.84□□□□□ -1.64
KLHL3-209ENST00000508657 NSD1Q96L73 2696 aaPredicted RBP4.84□□□□□ -1.64
KLHL3-209ENST00000508657 BOD1L1Q8NFC6 3051 aa4.82□□□□□ -1.64
KLHL3-209ENST00000508657 RELNP78509 3460 aa4.81□□□□□ -1.64
KLHL3-209ENST00000508657 ATMQ13315 3056 aa4.81□□□□□ -1.64
KLHL3-209ENST00000508657 BSNQ9UPA5 3926 aa4.8□□□□□ -1.64
KLHL3-209ENST00000508657 A6NN06 94 aa4.8□□□□□ -1.64
KLHL3-209ENST00000508657 TENM4Q6N022 2769 aa4.78□□□□□ -1.64
KLHL3-209ENST00000508657 NBPF19A0A087WUL8 3843 aa4.76□□□□□ -1.65
KLHL3-209ENST00000508657 HIVEP1P15822 2718 aa4.76□□□□□ -1.65
KLHL3-209ENST00000508657 SMG1Q96Q15 3661 aaKnown RBP4.76□□□□□ -1.65
KLHL3-209ENST00000508657 FLNCQ14315 2725 aa4.76□□□□□ -1.65
KLHL3-209ENST00000508657 COL12A1Q99715 3063 aa4.76□□□□□ -1.65
KLHL3-209ENST00000508657 ASH1LQ9NR48 2969 aaKnown RBP4.75□□□□□ -1.65
KLHL3-209ENST00000508657 NDUFAF8A1L188 74 aa4.74□□□□□ -1.65
KLHL3-209ENST00000508657 CSMD1Q96PZ7 3565 aa4.73□□□□□ -1.65
KLHL3-209ENST00000508657 KALRNO60229 2985 aa4.73□□□□□ -1.65
KLHL3-209ENST00000508657 KRTAP13-1Q8IUC0 172 aa4.73□□□□□ -1.65
KLHL3-209ENST00000508657 UTP20O75691 2785 aaKnown RBP4.73□□□□□ -1.65
KLHL3-209ENST00000508657 TPRXLQ17RH7 258 aa4.73□□□□□ -1.65
KLHL3-209ENST00000508657 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
KLHL3-209ENST00000508657 APCP25054 2843 aa4.72□□□□□ -1.65
KLHL3-209ENST00000508657 DMXL1Q9Y485 3027 aa4.7□□□□□ -1.66
KLHL3-209ENST00000508657 KRTAP16-1A8MUX0 517 aa4.7□□□□□ -1.66
KLHL3-209ENST00000508657 ADGRG4Q8IZF6 3080 aa4.68□□□□□ -1.66
KLHL3-209ENST00000508657 LRBAP50851 2863 aa4.68□□□□□ -1.66
KLHL3-209ENST00000508657 ITPR1Q14643 2758 aa4.68□□□□□ -1.66
KLHL3-209ENST00000508657 KRTAP1-4P0C5Y4 121 aa4.68□□□□□ -1.66
KLHL3-209ENST00000508657 ZFHX3Q15911 3703 aa4.66□□□□□ -1.66
KLHL3-209ENST00000508657 CRCT1Q9UGL9 99 aa4.65□□□□□ -1.67
KLHL3-209ENST00000508657 TENM2Q9NT68 2774 aa4.64□□□□□ -1.67
KLHL3-209ENST00000508657 ZZEF1O43149 2961 aa4.63□□□□□ -1.67
KLHL3-209ENST00000508657 KRTAP13-3Q3SY46 172 aa4.62□□□□□ -1.67
KLHL3-209ENST00000508657 TENM1Q9UKZ4 2725 aa4.61□□□□□ -1.67
KLHL3-209ENST00000508657 CUBNO60494 3623 aa4.6□□□□□ -1.67
KLHL3-209ENST00000508657 VPS13CQ709C8 3753 aa4.59□□□□□ -1.68
KLHL3-209ENST00000508657 SVEP1Q4LDE5 3571 aa4.56□□□□□ -1.68
KLHL3-209ENST00000508657 CELSR2Q9HCU4 2923 aa4.56□□□□□ -1.68
KLHL3-209ENST00000508657 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
KLHL3-209ENST00000508657 NBEAQ8NFP9 2946 aa4.51□□□□□ -1.69
KLHL3-209ENST00000508657 CSMD2Q7Z408 3487 aa4.49□□□□□ -1.69
KLHL3-209ENST00000508657 DCHS2Q6V1P9 2916 aa4.48□□□□□ -1.69
KLHL3-209ENST00000508657 PKD1L1Q8TDX9 2849 aa4.48□□□□□ -1.69
KLHL3-209ENST00000508657 H0YAA0 97 aa4.45□□□□□ -1.7
KLHL3-209ENST00000508657 KRTAP12-2P59991 146 aa4.44□□□□□ -1.7
KLHL3-209ENST00000508657 NF1P21359 2839 aa4.43□□□□□ -1.7
KLHL3-209ENST00000508657 VWFP04275 2813 aa4.43□□□□□ -1.7
KLHL3-209ENST00000508657 TENM3Q9P273 2699 aa4.42□□□□□ -1.7
KLHL3-209ENST00000508657 CELSR1Q9NYQ6 3014 aa4.39□□□□□ -1.71
KLHL3-209ENST00000508657 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
KLHL3-209ENST00000508657 AKAP9Q99996 3911 aa4.35□□□□□ -1.71
KLHL3-209ENST00000508657 LORP23490 312 aaPredicted RBP4.33□□□□□ -1.72
KLHL3-209ENST00000508657 NIPBLQ6KC79 2804 aaeCLIP4.33□□□□□ -1.72
KLHL3-209ENST00000508657 HRNRQ86YZ3 2850 aaPredicted RBP4.32□□□□□ -1.72
KLHL3-209ENST00000508657 KRTAP4-5Q9BYR2 181 aa4.32□□□□□ -1.72
KLHL3-209ENST00000508657 ZANQ9Y493 2812 aa4.32□□□□□ -1.72
KLHL3-209ENST00000508657 PDZD2O15018 2839 aa4.3□□□□□ -1.72
KLHL3-209ENST00000508657 ZNF469Q96JG9 3925 aaPredicted RBP4.29□□□□□ -1.72
KLHL3-209ENST00000508657 FBN2P35556 2912 aa4.25□□□□□ -1.73
KLHL3-209ENST00000508657 ANK3Q12955 4377 aaKnown RBP4.25□□□□□ -1.73
KLHL3-209ENST00000508657 TGP01266 2768 aa4.23□□□□□ -1.73
KLHL3-209ENST00000508657 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.74
KLHL3-209ENST00000508657 SRRM2Q9UQ35 2752 aaKnown RBP4.15□□□□□ -1.75
KLHL3-209ENST00000508657 CSMD3Q7Z407 3707 aa4.15□□□□□ -1.75
KLHL3-209ENST00000508657 KRTAP12-1P59990 96 aa4.14□□□□□ -1.75
KLHL3-209ENST00000508657 KRTAP10-12P60413 245 aa4.12□□□□□ -1.75
KLHL3-209ENST00000508657 FBN3Q75N90 2809 aa4.1□□□□□ -1.75
KLHL3-209ENST00000508657 CMYA5Q8N3K9 4069 aa4.09□□□□□ -1.76
KLHL3-209ENST00000508657 MT1HL1P0DM35 61 aa4.07□□□□□ -1.76
KLHL3-209ENST00000508657 KRTAP8-1Q8IUC2 63 aa4.06□□□□□ -1.76
KLHL3-209ENST00000508657 MXRA5Q9NR99 2828 aa4.04□□□□□ -1.76
KLHL3-209ENST00000508657 KRTAP3-1Q9BYR8 98 aa4.03□□□□□ -1.76
KLHL3-209ENST00000508657 MEGF8Q7Z7M0 2845 aa4.01□□□□□ -1.77
KLHL3-209ENST00000508657 ANK2Q01484 3957 aa4.01□□□□□ -1.77
KLHL3-209ENST00000508657 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
KLHL3-209ENST00000508657 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
KLHL3-209ENST00000508657 TRRAPQ9Y4A5 3859 aa3.97□□□□□ -1.77
KLHL3-209ENST00000508657 COL7A1Q02388 2944 aa3.96□□□□□ -1.78
KLHL3-209ENST00000508657 FBN1P35555 2871 aaKnown RBP3.95□□□□□ -1.78
KLHL3-209ENST00000508657 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
KLHL3-209ENST00000508657 LCE3AQ5TA76 89 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms