RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 DEFB104AQ8WTQ1 72 aa0.9□□□□□ -2.27
SMARCA5-202ENST00000508573 LYSTQ99698 3801 aa0.9□□□□□ -2.27
SMARCA5-202ENST00000508573 NOTCH1P46531 2555 aa0.89□□□□□ -2.27
SMARCA5-202ENST00000508573 PRCDQ00LT1 54 aa0.89□□□□□ -2.27
SMARCA5-202ENST00000508573 SACSQ9NZJ4 4579 aa0.89□□□□□ -2.27
SMARCA5-202ENST00000508573 NAV2Q8IVL1 2488 aa0.89□□□□□ -2.27
SMARCA5-202ENST00000508573 ZFYVE26Q68DK2 2539 aa0.87□□□□□ -2.27
SMARCA5-202ENST00000508573 DMBT1Q9UGM3 2413 aaPredicted RBP0.87□□□□□ -2.27
SMARCA5-202ENST00000508573 HUWE1Q7Z6Z7 4374 aaKnown RBP0.87□□□□□ -2.27
SMARCA5-202ENST00000508573 HIVEP3Q5T1R4 2406 aa0.87□□□□□ -2.27
SMARCA5-202ENST00000508573 VPS13DQ5THJ4 4388 aa0.86□□□□□ -2.27
SMARCA5-202ENST00000508573 VPS13BQ7Z7G8 4022 aa0.86□□□□□ -2.27
SMARCA5-202ENST00000508573 SETD2Q9BYW2 2564 aaPredicted RBP0.86□□□□□ -2.27
SMARCA5-202ENST00000508573 KMT2AQ03164 3969 aa0.86□□□□□ -2.27
SMARCA5-202ENST00000508573 PTPN13Q12923 2485 aa0.86□□□□□ -2.27
SMARCA5-202ENST00000508573 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
SMARCA5-202ENST00000508573 C9orf92A6NGG3 77 aa0.85□□□□□ -2.27
SMARCA5-202ENST00000508573 H3BNG1 76 aa0.85□□□□□ -2.27
SMARCA5-202ENST00000508573 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
SMARCA5-202ENST00000508573 PDZD2O15018 2839 aa0.85□□□□□ -2.27
SMARCA5-202ENST00000508573 UNC79Q9P2D8 2635 aa0.84□□□□□ -2.27
SMARCA5-202ENST00000508573 ACANP16112 2415 aa0.83□□□□□ -2.28
SMARCA5-202ENST00000508573 TNP1P09430 55 aa0.83□□□□□ -2.28
SMARCA5-202ENST00000508573 CHD7Q9P2D1 2997 aa0.83□□□□□ -2.28
SMARCA5-202ENST00000508573 COL6A5A8TX70 2615 aa0.83□□□□□ -2.28
SMARCA5-202ENST00000508573 PKD1L1Q8TDX9 2849 aa0.82□□□□□ -2.28
SMARCA5-202ENST00000508573 STAB1Q9NY15 2570 aa0.81□□□□□ -2.28
SMARCA5-202ENST00000508573 ACACAQ13085 2346 aa0.81□□□□□ -2.28
SMARCA5-202ENST00000508573 GCN1Q92616 2671 aaKnown RBP0.81□□□□□ -2.28
SMARCA5-202ENST00000508573 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
SMARCA5-202ENST00000508573 NF1P21359 2839 aa0.8□□□□□ -2.28
SMARCA5-202ENST00000508573 SETXQ7Z333 2677 aaKnown RBP0.79□□□□□ -2.28
SMARCA5-202ENST00000508573 HSPG2P98160 4391 aa0.78□□□□□ -2.28
SMARCA5-202ENST00000508573 APC2O95996 2303 aa0.78□□□□□ -2.28
SMARCA5-202ENST00000508573 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.29
SMARCA5-202ENST00000508573 DNAH2Q9P225 4427 aa0.78□□□□□ -2.29
SMARCA5-202ENST00000508573 AHNAK2Q8IVF2 5795 aa0.77□□□□□ -2.29
SMARCA5-202ENST00000508573 CCDC168Q8NDH2 2452 aa0.77□□□□□ -2.29
SMARCA5-202ENST00000508573 PKD1P98161 4303 aa0.77□□□□□ -2.29
SMARCA5-202ENST00000508573 LRP1Q07954 4544 aaKnown RBP0.77□□□□□ -2.29
SMARCA5-202ENST00000508573 FLNCQ14315 2725 aa0.77□□□□□ -2.29
SMARCA5-202ENST00000508573 SPRR2DP22532 72 aa0.77□□□□□ -2.29
SMARCA5-202ENST00000508573 DEFB110Q30KQ9 67 aa0.77□□□□□ -2.29
SMARCA5-202ENST00000508573 CUBNO60494 3623 aa0.77□□□□□ -2.29
SMARCA5-202ENST00000508573 ANK3Q12955 4377 aaKnown RBP0.77□□□□□ -2.29
SMARCA5-202ENST00000508573 RIF1Q5UIP0 2472 aaKnown RBP0.76□□□□□ -2.29
SMARCA5-202ENST00000508573 DNAH3Q8TD57 4116 aa0.76□□□□□ -2.29
SMARCA5-202ENST00000508573 K7EIM0 57 aa0.76□□□□□ -2.29
SMARCA5-202ENST00000508573 DNAH8Q96JB1 4490 aa0.76□□□□□ -2.29
SMARCA5-202ENST00000508573 PKHD1L1Q86WI1 4243 aa0.75□□□□□ -2.29
SMARCA5-202ENST00000508573 ZZEF1O43149 2961 aa0.75□□□□□ -2.29
SMARCA5-202ENST00000508573 LPAP08519 4548 aa0.75□□□□□ -2.29
SMARCA5-202ENST00000508573 NSD1Q96L73 2696 aaPredicted RBP0.74□□□□□ -2.29
SMARCA5-202ENST00000508573 MTORP42345 2549 aa0.74□□□□□ -2.29
SMARCA5-202ENST00000508573 CRYBG3Q68DQ2 2970 aa0.74□□□□□ -2.29
SMARCA5-202ENST00000508573 DYNC2H1Q8NCM8 4307 aaKnown RBP0.74□□□□□ -2.29
SMARCA5-202ENST00000508573 EPG5Q9HCE0 2579 aa0.73□□□□□ -2.29
SMARCA5-202ENST00000508573 DNAH9Q9NYC9 4486 aa0.73□□□□□ -2.29
SMARCA5-202ENST00000508573 USP24Q9UPU5 2620 aa0.73□□□□□ -2.29
SMARCA5-202ENST00000508573 RANBP2P49792 3224 aaKnown RBP0.72□□□□□ -2.29
SMARCA5-202ENST00000508573 SPTBN4Q9H254 2564 aa0.72□□□□□ -2.29
SMARCA5-202ENST00000508573 ANKHD1Q8IWZ3 2542 aaKnown RBP0.72□□□□□ -2.29
SMARCA5-202ENST00000508573 SPENQ96T58 3664 aaKnown RBP0.72□□□□□ -2.29
SMARCA5-202ENST00000508573 DMXL1Q9Y485 3027 aa0.72□□□□□ -2.29
SMARCA5-202ENST00000508573 TACC2O95359 2948 aa0.72□□□□□ -2.29
SMARCA5-202ENST00000508573 TENM2Q9NT68 2774 aa0.72□□□□□ -2.29
SMARCA5-202ENST00000508573 NBPF19A0A087WUL8 3843 aa0.72□□□□□ -2.29
SMARCA5-202ENST00000508573 HECTD4Q9Y4D8 3996 aa0.72□□□□□ -2.29
SMARCA5-202ENST00000508573 FAM186AA6NE01 2351 aa0.71□□□□□ -2.3
SMARCA5-202ENST00000508573 APOBP04114 4563 aaKnown RBP0.71□□□□□ -2.3
SMARCA5-202ENST00000508573 TMEM167AQ8TBQ9 72 aa0.71□□□□□ -2.3
SMARCA5-202ENST00000508573 CACNA1AO00555 2505 aa0.7□□□□□ -2.3
SMARCA5-202ENST00000508573 LRRK2Q5S007 2527 aa0.7□□□□□ -2.3
SMARCA5-202ENST00000508573 COL12A1Q99715 3063 aa0.7□□□□□ -2.3
SMARCA5-202ENST00000508573 SPART-AS1P0CW21 52 aa0.7□□□□□ -2.3
SMARCA5-202ENST00000508573 SPRR2BP35325 72 aa0.7□□□□□ -2.3
SMARCA5-202ENST00000508573 FLNBO75369 2602 aaKnown RBP0.7□□□□□ -2.3
SMARCA5-202ENST00000508573 SONP18583 2426 aaKnown RBP0.69□□□□□ -2.3
SMARCA5-202ENST00000508573 HRNRQ86YZ3 2850 aaPredicted RBP0.68□□□□□ -2.3
SMARCA5-202ENST00000508573 COL7A1Q02388 2944 aa0.68□□□□□ -2.3
SMARCA5-202ENST00000508573 DCHS2Q6V1P9 2916 aa0.68□□□□□ -2.3
SMARCA5-202ENST00000508573 TENM3Q9P273 2699 aa0.68□□□□□ -2.3
SMARCA5-202ENST00000508573 LRP1BQ9NZR2 4599 aa0.67□□□□□ -2.3
SMARCA5-202ENST00000508573 NBEAL2Q6ZNJ1 2754 aa0.67□□□□□ -2.3
SMARCA5-202ENST00000508573 KRTAP8-1Q8IUC2 63 aa0.67□□□□□ -2.3
SMARCA5-202ENST00000508573 USP9YO00507 2555 aaPredicted RBP0.67□□□□□ -2.3
SMARCA5-202ENST00000508573 NCOR2Q9Y618 2525 aa0.67□□□□□ -2.3
SMARCA5-202ENST00000508573 FRYQ5TBA9 3013 aa0.67□□□□□ -2.3
SMARCA5-202ENST00000508573 ZFHX4Q86UP3 3567 aa0.66□□□□□ -2.3
SMARCA5-202ENST00000508573 KRTAP6-2Q3LI66 62 aa0.66□□□□□ -2.3
SMARCA5-202ENST00000508573 ACACBO00763 2458 aa0.65□□□□□ -2.3
SMARCA5-202ENST00000508573 DNAH7Q8WXX0 4024 aa0.65□□□□□ -2.3
SMARCA5-202ENST00000508573 UTP20O75691 2785 aaKnown RBP0.65□□□□□ -2.3
SMARCA5-202ENST00000508573 FAT3Q8TDW7 4589 aa0.65□□□□□ -2.31
SMARCA5-202ENST00000508573 SPG11Q96JI7 2443 aa0.65□□□□□ -2.31
SMARCA5-202ENST00000508573 DNAH6Q9C0G6 4158 aa0.64□□□□□ -2.31
SMARCA5-202ENST00000508573 FLGP20930 4061 aaPredicted RBP0.64□□□□□ -2.31
SMARCA5-202ENST00000508573 RPL39P5Q59GN2 51 aa0.64□□□□□ -2.31
SMARCA5-202ENST00000508573 LAMA5O15230 3695 aa0.64□□□□□ -2.31
SMARCA5-202ENST00000508573 SPTBN5Q9NRC6 3674 aaKnown RBP0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms