RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 LINC00313P59037 77 aa6.75□□□□□ -1.33
SNCA-208ENST00000505199 RPL37P61927 97 aaKnown RBP6.75□□□□□ -1.33
SNCA-208ENST00000505199 A0A1B0GVX0 72 aa6.74□□□□□ -1.33
SNCA-208ENST00000505199 A8MWP4 228 aa6.74□□□□□ -1.33
SNCA-208ENST00000505199 LCE2DQ5TA82 110 aaPredicted RBP6.74□□□□□ -1.33
SNCA-208ENST00000505199 C20orf166-AS1Q96NR2 134 aa6.73□□□□□ -1.33
SNCA-208ENST00000505199 UBL5Q9BZL1 73 aa6.72□□□□□ -1.33
SNCA-208ENST00000505199 A8MUU9 505 aa6.71□□□□□ -1.34
SNCA-208ENST00000505199 ACYP1P07311 99 aa6.71□□□□□ -1.34
SNCA-208ENST00000505199 DEFB116Q30KQ4 102 aa6.71□□□□□ -1.34
SNCA-208ENST00000505199 FAM240AA0A1B0GVK7 77 aa6.7□□□□□ -1.34
SNCA-208ENST00000505199 Q6ZVQ6 151 aa6.7□□□□□ -1.34
SNCA-208ENST00000505199 IGHV6-1A0A0B4J1U7 121 aa6.69□□□□□ -1.34
SNCA-208ENST00000505199 BPY2O14599 106 aa6.69□□□□□ -1.34
SNCA-208ENST00000505199 PRR15Q8IV56 129 aa6.69□□□□□ -1.34
SNCA-208ENST00000505199 A0A0U1RQV1 116 aa6.68□□□□□ -1.34
SNCA-208ENST00000505199 ATP11AUNQ6ZP68 121 aa6.68□□□□□ -1.34
SNCA-208ENST00000505199 LINC00846Q9NV44 126 aa6.68□□□□□ -1.34
SNCA-208ENST00000505199 KRTAP16-1A8MUX0 517 aa6.67□□□□□ -1.34
SNCA-208ENST00000505199 DSCR10P59022 87 aa6.67□□□□□ -1.34
SNCA-208ENST00000505199 C5orf47Q569G3 176 aa6.67□□□□□ -1.34
SNCA-208ENST00000505199 IGKV3D-7A0A0C4DH55 119 aa6.66□□□□□ -1.34
SNCA-208ENST00000505199 K7ERU9 68 aa6.66□□□□□ -1.34
SNCA-208ENST00000505199 PCOTHQ58A44 107 aa6.65□□□□□ -1.34
SNCA-208ENST00000505199 CXCL6P80162 114 aa6.63□□□□□ -1.35
SNCA-208ENST00000505199 RNF213Q63HN8 5207 aa6.63□□□□□ -1.35
SNCA-208ENST00000505199 C8orf17Q9NRJ1 99 aa6.63□□□□□ -1.35
SNCA-208ENST00000505199 NOTCH2NLQ7Z3S9 236 aa6.62□□□□□ -1.35
SNCA-208ENST00000505199 Q8N9P0 234 aaPredicted RBP6.62□□□□□ -1.35
SNCA-208ENST00000505199 MUC2Q02817 5179 aa6.62□□□□□ -1.35
SNCA-208ENST00000505199 K7EQZ3 153 aa6.61□□□□□ -1.35
SNCA-208ENST00000505199 TMEM254Q8TBM7 123 aa6.6□□□□□ -1.35
SNCA-208ENST00000505199 MUC17Q685J3 4493 aa6.6□□□□□ -1.35
SNCA-208ENST00000505199 J3QR89 54 aa6.59□□□□□ -1.35
SNCA-208ENST00000505199 ATP5EP2Q5VTU8 51 aa6.59□□□□□ -1.35
SNCA-208ENST00000505199 MMP24-AS1A0A0U1RRL7 71 aa6.58□□□□□ -1.36
SNCA-208ENST00000505199 hDV103S1A0JD37 113 aa6.57□□□□□ -1.36
SNCA-208ENST00000505199 MRPL34Q9BQ48 92 aaKnown RBP6.57□□□□□ -1.36
SNCA-208ENST00000505199 KRTAP4-1Q9BYQ7 146 aa6.55□□□□□ -1.36
SNCA-208ENST00000505199 CASC2Q6XLA1 102 aa6.52□□□□□ -1.37
SNCA-208ENST00000505199 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
SNCA-208ENST00000505199 HCG22E2RYF7 251 aa6.51□□□□□ -1.37
SNCA-208ENST00000505199 LINC00643Q86TS7 51 aa6.51□□□□□ -1.37
SNCA-208ENST00000505199 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
SNCA-208ENST00000505199 KRTAP3-2Q9BYR7 98 aa6.51□□□□□ -1.37
SNCA-208ENST00000505199 Q8N9L7 120 aa6.5□□□□□ -1.37
SNCA-208ENST00000505199 TP53AIP1Q9HCN2 124 aa6.46□□□□□ -1.38
SNCA-208ENST00000505199 SEC61GP60059 68 aa6.45□□□□□ -1.38
SNCA-208ENST00000505199 WFDC13Q8IUB5 93 aa6.45□□□□□ -1.38
SNCA-208ENST00000505199 NDUFS5O43920 106 aa6.44□□□□□ -1.38
SNCA-208ENST00000505199 KRTAP19-2Q3LHN2 52 aa6.43□□□□□ -1.38
SNCA-208ENST00000505199 LCE2AQ5TA79 106 aaPredicted RBP6.42□□□□□ -1.38
SNCA-208ENST00000505199 SPINK7P58062 85 aa6.4□□□□□ -1.38
SNCA-208ENST00000505199 MPLKIPQ8TAP9 179 aa6.4□□□□□ -1.38
SNCA-208ENST00000505199 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
SNCA-208ENST00000505199 HIST1H4AP62805 103 aaKnown RBP6.38□□□□□ -1.39
SNCA-208ENST00000505199 RBM12B-AS1Q9P1G2 102 aa6.38□□□□□ -1.39
SNCA-208ENST00000505199 COX6B2Q6YFQ2 88 aa6.37□□□□□ -1.39
SNCA-208ENST00000505199 HRES1P13985 223 aa6.36□□□□□ -1.39
SNCA-208ENST00000505199 SMIM20Q8N5G0 67 aa6.36□□□□□ -1.39
SNCA-208ENST00000505199 C7orf65Q6ZTY9 151 aa6.35□□□□□ -1.39
SNCA-208ENST00000505199 IMUPQ9GZP8 106 aa6.35□□□□□ -1.39
SNCA-208ENST00000505199 Q5W150 140 aa6.34□□□□□ -1.39
SNCA-208ENST00000505199 V9GYY9 64 aa6.34□□□□□ -1.39
SNCA-208ENST00000505199 FAT4Q6V0I7 4981 aa6.33□□□□□ -1.4
SNCA-208ENST00000505199 UQCRQO14949 82 aa6.3□□□□□ -1.4
SNCA-208ENST00000505199 MT1HP80294 61 aa6.3□□□□□ -1.4
SNCA-208ENST00000505199 TRAV22A0A0B4J277 110 aa6.29□□□□□ -1.4
SNCA-208ENST00000505199 A0A087WVE0 104 aa6.28□□□□□ -1.4
SNCA-208ENST00000505199 ATOX1O00244 68 aa6.28□□□□□ -1.4
SNCA-208ENST00000505199 IGKV2D-30A0A075B6S6 120 aa6.27□□□□□ -1.41
SNCA-208ENST00000505199 FAM236DA0A1B0GTK5 79 aa6.27□□□□□ -1.41
SNCA-208ENST00000505199 IGKV2-30P06310 120 aa6.27□□□□□ -1.41
SNCA-208ENST00000505199 FAM236CP0DP71 79 aa6.27□□□□□ -1.41
SNCA-208ENST00000505199 LOC101927531A0A1B0GV80 90 aa6.25□□□□□ -1.41
SNCA-208ENST00000505199 ANAPC13Q9BS18 74 aa6.25□□□□□ -1.41
SNCA-208ENST00000505199 OCR1Q9BZK8 76 aa6.24□□□□□ -1.41
SNCA-208ENST00000505199 FLGP20930 4061 aaPredicted RBP6.21□□□□□ -1.42
SNCA-208ENST00000505199 M0R2T5 61 aa6.2□□□□□ -1.42
SNCA-208ENST00000505199 CYP4F30PQ9H0H9 118 aa6.2□□□□□ -1.42
SNCA-208ENST00000505199 H3BPC8 53 aa6.19□□□□□ -1.42
SNCA-208ENST00000505199 MT-ATP8P03928 68 aa6.19□□□□□ -1.42
SNCA-208ENST00000505199 PRO0628Q9UI54 55 aa6.19□□□□□ -1.42
SNCA-208ENST00000505199 H0Y9P7 68 aa6.18□□□□□ -1.42
SNCA-208ENST00000505199 MP68P56378 58 aa6.18□□□□□ -1.42
SNCA-208ENST00000505199 RPS28P62857 69 aaKnown RBP6.18□□□□□ -1.42
SNCA-208ENST00000505199 H1FX-AS1Q4G0G2 97 aa6.17□□□□□ -1.42
SNCA-208ENST00000505199 LORP23490 312 aaPredicted RBP6.15□□□□□ -1.42
SNCA-208ENST00000505199 KRTAP10-6P60371 365 aaPredicted RBP6.14□□□□□ -1.43
SNCA-208ENST00000505199 C4orf26Q17RF5 130 aa6.14□□□□□ -1.43
SNCA-208ENST00000505199 C1orf64Q8NEQ6 169 aa6.13□□□□□ -1.43
SNCA-208ENST00000505199 FAM236AA0A1B0GUQ0 79 aa6.11□□□□□ -1.43
SNCA-208ENST00000505199 FAM236BA0A1B0GV22 79 aa6.11□□□□□ -1.43
SNCA-208ENST00000505199 LINC00208Q96KT6 92 aa6.1□□□□□ -1.43
SNCA-208ENST00000505199 TRAV7A0A075B6U4 112 aa6.09□□□□□ -1.43
SNCA-208ENST00000505199 A8MUN3 132 aa6.08□□□□□ -1.44
SNCA-208ENST00000505199 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
SNCA-208ENST00000505199 KRTAP9-8Q9BYQ0 159 aa6.02□□□□□ -1.45
SNCA-208ENST00000505199 SERP2Q8N6R1 65 aa6□□□□□ -1.45
SNCA-208ENST00000505199 S4R3F8 94 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms