RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 KRTAP19-2Q3LHN2 52 aa4.46□□□□□ -1.7
CDC42SE2-208ENST00000505065 RPL37P61927 97 aaKnown RBP4.45□□□□□ -1.7
CDC42SE2-208ENST00000505065 A8MWP4 228 aa4.44□□□□□ -1.7
CDC42SE2-208ENST00000505065 A0A1B0GVX0 72 aa4.44□□□□□ -1.7
CDC42SE2-208ENST00000505065 C8orf87E5RJ46 101 aa4.44□□□□□ -1.7
CDC42SE2-208ENST00000505065 KRTAP4-1Q9BYQ7 146 aa4.44□□□□□ -1.7
CDC42SE2-208ENST00000505065 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
CDC42SE2-208ENST00000505065 LINC00846Q9NV44 126 aa4.43□□□□□ -1.7
CDC42SE2-208ENST00000505065 PRR4Q16378 134 aa4.43□□□□□ -1.7
CDC42SE2-208ENST00000505065 Q6ZVQ6 151 aa4.43□□□□□ -1.7
CDC42SE2-208ENST00000505065 ACYP1P07311 99 aa4.43□□□□□ -1.7
CDC42SE2-208ENST00000505065 ETDBQ3ZM63 59 aa4.43□□□□□ -1.7
CDC42SE2-208ENST00000505065 NOTCH2NLQ7Z3S9 236 aa4.42□□□□□ -1.7
CDC42SE2-208ENST00000505065 IGKV3D-7A0A0C4DH55 119 aa4.41□□□□□ -1.7
CDC42SE2-208ENST00000505065 CXCL6P80162 114 aa4.41□□□□□ -1.7
CDC42SE2-208ENST00000505065 PRR15Q8IV56 129 aa4.41□□□□□ -1.7
CDC42SE2-208ENST00000505065 SMIM20Q8N5G0 67 aa4.41□□□□□ -1.7
CDC42SE2-208ENST00000505065 MMP24-AS1A0A0U1RRL7 71 aa4.4□□□□□ -1.7
CDC42SE2-208ENST00000505065 IGKV4-1P06312 121 aa4.39□□□□□ -1.71
CDC42SE2-208ENST00000505065 MUC2Q02817 5179 aa4.37□□□□□ -1.71
CDC42SE2-208ENST00000505065 MT-ATP8P03928 68 aa4.37□□□□□ -1.71
CDC42SE2-208ENST00000505065 LCE2CQ5TA81 110 aa4.37□□□□□ -1.71
CDC42SE2-208ENST00000505065 C8orf17Q9NRJ1 99 aa4.37□□□□□ -1.71
CDC42SE2-208ENST00000505065 TMEM254Q8TBM7 123 aa4.37□□□□□ -1.71
CDC42SE2-208ENST00000505065 MPLKIPQ8TAP9 179 aa4.36□□□□□ -1.71
CDC42SE2-208ENST00000505065 NREPQ16612 68 aa4.36□□□□□ -1.71
CDC42SE2-208ENST00000505065 CDIP1Q9H305 208 aa4.36□□□□□ -1.71
CDC42SE2-208ENST00000505065 ATP5EP2Q5VTU8 51 aa4.36□□□□□ -1.71
CDC42SE2-208ENST00000505065 LINC00313P59037 77 aa4.35□□□□□ -1.71
CDC42SE2-208ENST00000505065 ANAPC13Q9BS18 74 aa4.35□□□□□ -1.71
CDC42SE2-208ENST00000505065 K7EQZ3 153 aa4.35□□□□□ -1.71
CDC42SE2-208ENST00000505065 SEC61BP60468 96 aaKnown RBP4.35□□□□□ -1.71
CDC42SE2-208ENST00000505065 J3QR89 54 aa4.34□□□□□ -1.71
CDC42SE2-208ENST00000505065 C9orf92A6NGG3 77 aa4.33□□□□□ -1.72
CDC42SE2-208ENST00000505065 CCDC179H3BU77 68 aa4.33□□□□□ -1.72
CDC42SE2-208ENST00000505065 LCE2AQ5TA79 106 aaPredicted RBP4.33□□□□□ -1.72
CDC42SE2-208ENST00000505065 DEFB116Q30KQ4 102 aa4.33□□□□□ -1.72
CDC42SE2-208ENST00000505065 UBL5Q9BZL1 73 aa4.32□□□□□ -1.72
CDC42SE2-208ENST00000505065 BPY2O14599 106 aa4.31□□□□□ -1.72
CDC42SE2-208ENST00000505065 LINC00643Q86TS7 51 aa4.3□□□□□ -1.72
CDC42SE2-208ENST00000505065 FAT4Q6V0I7 4981 aa4.3□□□□□ -1.72
CDC42SE2-208ENST00000505065 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
CDC42SE2-208ENST00000505065 IGHV6-1A0A0B4J1U7 121 aa4.29□□□□□ -1.72
CDC42SE2-208ENST00000505065 PCOTHQ58A44 107 aa4.29□□□□□ -1.72
CDC42SE2-208ENST00000505065 NDUFB1O75438 58 aa4.29□□□□□ -1.72
CDC42SE2-208ENST00000505065 HRES1P13985 223 aa4.28□□□□□ -1.72
CDC42SE2-208ENST00000505065 C5orf47Q569G3 176 aa4.28□□□□□ -1.72
CDC42SE2-208ENST00000505065 ZCCHC13Q8WW36 166 aaKnown RBP4.28□□□□□ -1.72
CDC42SE2-208ENST00000505065 hDV103S1A0JD37 113 aa4.27□□□□□ -1.73
CDC42SE2-208ENST00000505065 HIST1H4AP62805 103 aaKnown RBP4.27□□□□□ -1.73
CDC42SE2-208ENST00000505065 HCG22E2RYF7 251 aa4.26□□□□□ -1.73
CDC42SE2-208ENST00000505065 Q8N9L7 120 aa4.25□□□□□ -1.73
CDC42SE2-208ENST00000505065 IMUPQ9GZP8 106 aa4.24□□□□□ -1.73
CDC42SE2-208ENST00000505065 Q5W150 140 aa4.23□□□□□ -1.73
CDC42SE2-208ENST00000505065 CASC2Q6XLA1 102 aa4.23□□□□□ -1.73
CDC42SE2-208ENST00000505065 ATP11AUNQ6ZP68 121 aa4.21□□□□□ -1.73
CDC42SE2-208ENST00000505065 TP53AIP1Q9HCN2 124 aa4.21□□□□□ -1.74
CDC42SE2-208ENST00000505065 MT1HP80294 61 aa4.21□□□□□ -1.74
CDC42SE2-208ENST00000505065 WFDC13Q8IUB5 93 aa4.2□□□□□ -1.74
CDC42SE2-208ENST00000505065 OCR1Q9BZK8 76 aa4.2□□□□□ -1.74
CDC42SE2-208ENST00000505065 IGKV2-30P06310 120 aa4.17□□□□□ -1.74
CDC42SE2-208ENST00000505065 UQCRQO14949 82 aa4.15□□□□□ -1.75
CDC42SE2-208ENST00000505065 A0A0U1RQV1 116 aa4.14□□□□□ -1.75
CDC42SE2-208ENST00000505065 SPINK7P58062 85 aa4.14□□□□□ -1.75
CDC42SE2-208ENST00000505065 C4orf26Q17RF5 130 aa4.14□□□□□ -1.75
CDC42SE2-208ENST00000505065 A0A087WVE0 104 aa4.13□□□□□ -1.75
CDC42SE2-208ENST00000505065 LORP23490 312 aaPredicted RBP4.13□□□□□ -1.75
CDC42SE2-208ENST00000505065 KRTAP3-1Q9BYR8 98 aa4.11□□□□□ -1.75
CDC42SE2-208ENST00000505065 FAM236AA0A1B0GUQ0 79 aa4.11□□□□□ -1.75
CDC42SE2-208ENST00000505065 FAM236BA0A1B0GV22 79 aa4.11□□□□□ -1.75
CDC42SE2-208ENST00000505065 C7orf65Q6ZTY9 151 aa4.11□□□□□ -1.75
CDC42SE2-208ENST00000505065 CYSTM1Q9H1C7 97 aa4.1□□□□□ -1.75
CDC42SE2-208ENST00000505065 CYP4F30PQ9H0H9 118 aa4.1□□□□□ -1.75
CDC42SE2-208ENST00000505065 H3BPC8 53 aa4.09□□□□□ -1.75
CDC42SE2-208ENST00000505065 TRAV22A0A0B4J277 110 aa4.09□□□□□ -1.75
CDC42SE2-208ENST00000505065 RPS28P62857 69 aaKnown RBP4.09□□□□□ -1.75
CDC42SE2-208ENST00000505065 H3BS24 57 aa4.08□□□□□ -1.76
CDC42SE2-208ENST00000505065 LOC101927531A0A1B0GV80 90 aa4.08□□□□□ -1.76
CDC42SE2-208ENST00000505065 ATOX1O00244 68 aa4.08□□□□□ -1.76
CDC42SE2-208ENST00000505065 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
CDC42SE2-208ENST00000505065 KRTAP9-8Q9BYQ0 159 aa4.07□□□□□ -1.76
CDC42SE2-208ENST00000505065 COX6B2Q6YFQ2 88 aa4.05□□□□□ -1.76
CDC42SE2-208ENST00000505065 SEC61GP60059 68 aa4.05□□□□□ -1.76
CDC42SE2-208ENST00000505065 LCE2DQ5TA82 110 aaPredicted RBP4.05□□□□□ -1.76
CDC42SE2-208ENST00000505065 COX7CP15954 63 aa4.04□□□□□ -1.76
CDC42SE2-208ENST00000505065 KLKP1Q107X0 134 aa4.04□□□□□ -1.76
CDC42SE2-208ENST00000505065 TRAV7A0A075B6U4 112 aa4.04□□□□□ -1.76
CDC42SE2-208ENST00000505065 RBM12B-AS1Q9P1G2 102 aa4.03□□□□□ -1.76
CDC42SE2-208ENST00000505065 PRO0628Q9UI54 55 aa4.03□□□□□ -1.76
CDC42SE2-208ENST00000505065 H0Y9P7 68 aa4.02□□□□□ -1.77
CDC42SE2-208ENST00000505065 NDUFS5O43920 106 aa4.02□□□□□ -1.77
CDC42SE2-208ENST00000505065 H1FX-AS1Q4G0G2 97 aa4.02□□□□□ -1.77
CDC42SE2-208ENST00000505065 KRTAP3-3Q9BYR6 98 aa4.02□□□□□ -1.77
CDC42SE2-208ENST00000505065 IGKV2D-30A0A075B6S6 120 aa4.02□□□□□ -1.77
CDC42SE2-208ENST00000505065 TMEM258P61165 79 aa4□□□□□ -1.77
CDC42SE2-208ENST00000505065 FAM236DA0A1B0GTK5 79 aa3.99□□□□□ -1.77
CDC42SE2-208ENST00000505065 FAM236CP0DP71 79 aa3.99□□□□□ -1.77
CDC42SE2-208ENST00000505065 A8MUN3 132 aa3.98□□□□□ -1.77
CDC42SE2-208ENST00000505065 C1orf64Q8NEQ6 169 aa3.98□□□□□ -1.77
CDC42SE2-208ENST00000505065 V9GYY9 64 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms