RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 KRTAP3-1Q9BYR8 98 aa2.86□□□□□ -1.95
LINC02397-201ENST00000504409 FRYQ5TBA9 3013 aa2.86□□□□□ -1.95
LINC02397-201ENST00000504409 TENM2Q9NT68 2774 aa2.86□□□□□ -1.95
LINC02397-201ENST00000504409 ZZEF1O43149 2961 aa2.85□□□□□ -1.95
LINC02397-201ENST00000504409 HIVEP1P15822 2718 aa2.84□□□□□ -1.95
LINC02397-201ENST00000504409 TENM3Q9P273 2699 aa2.84□□□□□ -1.96
LINC02397-201ENST00000504409 FRYLO94915 3013 aa2.81□□□□□ -1.96
LINC02397-201ENST00000504409 KRTAP3-2Q9BYR7 98 aa2.81□□□□□ -1.96
LINC02397-201ENST00000504409 TACC2O95359 2948 aa2.81□□□□□ -1.96
LINC02397-201ENST00000504409 KALRNO60229 2985 aa2.8□□□□□ -1.96
LINC02397-201ENST00000504409 MXRA5Q9NR99 2828 aa2.79□□□□□ -1.96
LINC02397-201ENST00000504409 NBEAQ8NFP9 2946 aa2.78□□□□□ -1.96
LINC02397-201ENST00000504409 SRRM2Q9UQ35 2752 aaKnown RBP2.75□□□□□ -1.97
LINC02397-201ENST00000504409 ASH1LQ9NR48 2969 aaKnown RBP2.75□□□□□ -1.97
LINC02397-201ENST00000504409 NF1P21359 2839 aa2.75□□□□□ -1.97
LINC02397-201ENST00000504409 VWFP04275 2813 aa2.75□□□□□ -1.97
LINC02397-201ENST00000504409 CFAP54Q96N23 3096 aa2.75□□□□□ -1.97
LINC02397-201ENST00000504409 KRTAP3-3Q9BYR6 98 aa2.74□□□□□ -1.97
LINC02397-201ENST00000504409 AKAP9Q99996 3911 aa2.74□□□□□ -1.97
LINC02397-201ENST00000504409 TENM1Q9UKZ4 2725 aa2.74□□□□□ -1.97
LINC02397-201ENST00000504409 LAMA1P25391 3075 aa2.73□□□□□ -1.97
LINC02397-201ENST00000504409 CMYA5Q8N3K9 4069 aa2.72□□□□□ -1.97
LINC02397-201ENST00000504409 PDZD2O15018 2839 aa2.72□□□□□ -1.97
LINC02397-201ENST00000504409 CELSR2Q9HCU4 2923 aa2.71□□□□□ -1.97
LINC02397-201ENST00000504409 C5orf42Q9H799 3197 aa2.71□□□□□ -1.98
LINC02397-201ENST00000504409 COL12A1Q99715 3063 aa2.71□□□□□ -1.98
LINC02397-201ENST00000504409 ZANQ9Y493 2812 aa2.69□□□□□ -1.98
LINC02397-201ENST00000504409 CEP350Q5VT06 3117 aa2.68□□□□□ -1.98
LINC02397-201ENST00000504409 PCNTO95613 3336 aa2.68□□□□□ -1.98
LINC02397-201ENST00000504409 VPS13AQ96RL7 3174 aa2.67□□□□□ -1.98
LINC02397-201ENST00000504409 A0A1B0GVY2 172 aa2.66□□□□□ -1.98
LINC02397-201ENST00000504409 KRTAP10-12P60413 245 aa2.66□□□□□ -1.98
LINC02397-201ENST00000504409 GOLGB1Q14789 3259 aaKnown RBP2.65□□□□□ -1.98
LINC02397-201ENST00000504409 SPRR5A0A1B0GTR4 108 aa2.65□□□□□ -1.98
LINC02397-201ENST00000504409 UTRNP46939 3433 aa2.65□□□□□ -1.98
LINC02397-201ENST00000504409 HTTP42858 3142 aa2.65□□□□□ -1.99
LINC02397-201ENST00000504409 LAMA2P24043 3122 aaKnown RBP2.64□□□□□ -1.99
LINC02397-201ENST00000504409 TENM4Q6N022 2769 aa2.64□□□□□ -1.99
LINC02397-201ENST00000504409 DNAH3Q8TD57 4116 aa2.64□□□□□ -1.99
LINC02397-201ENST00000504409 TRIOO75962 3097 aa2.63□□□□□ -1.99
LINC02397-201ENST00000504409 PKD1L1Q8TDX9 2849 aa2.62□□□□□ -1.99
LINC02397-201ENST00000504409 MT3P25713 68 aa2.62□□□□□ -1.99
LINC02397-201ENST00000504409 KRTAP12-3P60328 96 aa2.62□□□□□ -1.99
LINC02397-201ENST00000504409 MEGF8Q7Z7M0 2845 aa2.62□□□□□ -1.99
LINC02397-201ENST00000504409 WDFY4Q6ZS81 3184 aa2.61□□□□□ -1.99
LINC02397-201ENST00000504409 DCHS2Q6V1P9 2916 aa2.61□□□□□ -1.99
LINC02397-201ENST00000504409 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
LINC02397-201ENST00000504409 ADGRG4Q8IZF6 3080 aa2.6□□□□□ -1.99
LINC02397-201ENST00000504409 NBPF19A0A087WUL8 3843 aa2.6□□□□□ -1.99
LINC02397-201ENST00000504409 CELSR1Q9NYQ6 3014 aa2.59□□□□□ -1.99
LINC02397-201ENST00000504409 USP34Q70CQ2 3546 aa2.59□□□□□ -1.99
LINC02397-201ENST00000504409 FBN2P35556 2912 aa2.58□□□□□ -2
LINC02397-201ENST00000504409 RANBP2P49792 3224 aaKnown RBP2.55□□□□□ -2
LINC02397-201ENST00000504409 DNAH6Q9C0G6 4158 aa2.55□□□□□ -2
LINC02397-201ENST00000504409 PRUNE2Q8WUY3 3088 aa2.54□□□□□ -2
LINC02397-201ENST00000504409 ANK2Q01484 3957 aa2.54□□□□□ -2
LINC02397-201ENST00000504409 UNC80Q8N2C7 3258 aa2.53□□□□□ -2
LINC02397-201ENST00000504409 HUWE1Q7Z6Z7 4374 aaKnown RBP2.52□□□□□ -2.01
LINC02397-201ENST00000504409 DMXL2Q8TDJ6 3036 aa2.51□□□□□ -2.01
LINC02397-201ENST00000504409 KRTAP8-1Q8IUC2 63 aa2.51□□□□□ -2.01
LINC02397-201ENST00000504409 CRYBG3Q68DQ2 2970 aa2.49□□□□□ -2.01
LINC02397-201ENST00000504409 DMXL1Q9Y485 3027 aa2.48□□□□□ -2.01
LINC02397-201ENST00000504409 OTOGQ6ZRI0 2925 aa2.48□□□□□ -2.01
LINC02397-201ENST00000504409 LYSTQ99698 3801 aa2.47□□□□□ -2.01
LINC02397-201ENST00000504409 DNAH7Q8WXX0 4024 aa2.47□□□□□ -2.01
LINC02397-201ENST00000504409 SPRR2GQ9BYE4 73 aa2.47□□□□□ -2.01
LINC02397-201ENST00000504409 ATMQ13315 3056 aa2.46□□□□□ -2.02
LINC02397-201ENST00000504409 FBN3Q75N90 2809 aa2.45□□□□□ -2.02
LINC02397-201ENST00000504409 LCE3AQ5TA76 89 aa2.44□□□□□ -2.02
LINC02397-201ENST00000504409 KRTAP10-4P60372 401 aaPredicted RBP2.44□□□□□ -2.02
LINC02397-201ENST00000504409 SPENQ96T58 3664 aaKnown RBP2.43□□□□□ -2.02
LINC02397-201ENST00000504409 BOD1L1Q8NFC6 3051 aa2.42□□□□□ -2.02
LINC02397-201ENST00000504409 LORP23490 312 aaPredicted RBP2.42□□□□□ -2.02
LINC02397-201ENST00000504409 REV3LO60673 3130 aa2.42□□□□□ -2.02
LINC02397-201ENST00000504409 TRRAPQ9Y4A5 3859 aa2.42□□□□□ -2.02
LINC02397-201ENST00000504409 HECTD4Q9Y4D8 3996 aa2.42□□□□□ -2.02
LINC02397-201ENST00000504409 MKI67P46013 3256 aaKnown RBP2.41□□□□□ -2.02
LINC02397-201ENST00000504409 XIRP2A4UGR9 3374 aa2.4□□□□□ -2.03
LINC02397-201ENST00000504409 BSNQ9UPA5 3926 aa2.4□□□□□ -2.03
LINC02397-201ENST00000504409 ZFHX4Q86UP3 3567 aa2.39□□□□□ -2.03
LINC02397-201ENST00000504409 SPTBN5Q9NRC6 3674 aaKnown RBP2.39□□□□□ -2.03
LINC02397-201ENST00000504409 FREM2Q5SZK8 3169 aa2.39□□□□□ -2.03
LINC02397-201ENST00000504409 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
LINC02397-201ENST00000504409 COL7A1Q02388 2944 aa2.38□□□□□ -2.03
LINC02397-201ENST00000504409 BRCA2P51587 3418 aa2.38□□□□□ -2.03
LINC02397-201ENST00000504409 LAMA3Q16787 3333 aa2.37□□□□□ -2.03
LINC02397-201ENST00000504409 PRKDCP78527 4128 aaKnown RBP2.36□□□□□ -2.03
LINC02397-201ENST00000504409 DNAH1Q9P2D7 4330 aa2.35□□□□□ -2.03
LINC02397-201ENST00000504409 MT1HL1P0DM35 61 aa2.35□□□□□ -2.03
LINC02397-201ENST00000504409 VCANP13611 3396 aa2.35□□□□□ -2.03
LINC02397-201ENST00000504409 DNAH14Q0VDD8 3507 aa2.35□□□□□ -2.03
LINC02397-201ENST00000504409 COL6A3P12111 3177 aa2.32□□□□□ -2.04
LINC02397-201ENST00000504409 DNAH10Q8IVF4 4471 aa2.32□□□□□ -2.04
LINC02397-201ENST00000504409 VPS13CQ709C8 3753 aa2.32□□□□□ -2.04
LINC02397-201ENST00000504409 EYSQ5T1H1 3165 aa2.31□□□□□ -2.04
LINC02397-201ENST00000504409 DYNC2H1Q8NCM8 4307 aaKnown RBP2.31□□□□□ -2.04
LINC02397-201ENST00000504409 FAT2Q9NYQ8 4349 aa2.31□□□□□ -2.04
LINC02397-201ENST00000504409 CDH23Q9H251 3354 aa2.3□□□□□ -2.04
LINC02397-201ENST00000504409 FRAS1Q86XX4 4008 aa2.29□□□□□ -2.04
LINC02397-201ENST00000504409 DNAH2Q9P225 4427 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms