RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 NDUFA3O95167 84 aa1.21□□□□□ -2.22
TRAPPC13-205ENST00000504243 MEGF8Q7Z7M0 2845 aa1.21□□□□□ -2.22
TRAPPC13-205ENST00000504243 DDX60Q8IY21 1712 aaKnown RBP1.2□□□□□ -2.22
TRAPPC13-205ENST00000504243 COL12A1Q99715 3063 aa1.2□□□□□ -2.22
TRAPPC13-205ENST00000504243 FAT4Q6V0I7 4981 aa1.2□□□□□ -2.22
TRAPPC13-205ENST00000504243 MXRA5Q9NR99 2828 aa1.2□□□□□ -2.22
TRAPPC13-205ENST00000504243 SPENQ96T58 3664 aaKnown RBP1.2□□□□□ -2.22
TRAPPC13-205ENST00000504243 LINC00158P58513 81 aa1.2□□□□□ -2.22
TRAPPC13-205ENST00000504243 Q8IZM0 81 aa1.2□□□□□ -2.22
TRAPPC13-205ENST00000504243 CNFNQ9BYD5 112 aa1.2□□□□□ -2.22
TRAPPC13-205ENST00000504243 FAM186AA6NE01 2351 aa1.2□□□□□ -2.22
TRAPPC13-205ENST00000504243 K7EIL1 84 aa1.19□□□□□ -2.22
TRAPPC13-205ENST00000504243 CRIP1P50238 77 aa1.19□□□□□ -2.22
TRAPPC13-205ENST00000504243 DEFB123Q8N688 67 aa1.19□□□□□ -2.22
TRAPPC13-205ENST00000504243 MRPL34Q9BQ48 92 aaKnown RBP1.19□□□□□ -2.22
TRAPPC13-205ENST00000504243 CDKN2A-AS1Q9UH64 79 aa1.19□□□□□ -2.22
TRAPPC13-205ENST00000504243 LRBAP50851 2863 aa1.18□□□□□ -2.22
TRAPPC13-205ENST00000504243 NEBP20929 6669 aa1.18□□□□□ -2.22
TRAPPC13-205ENST00000504243 PRO3102Q9H379 93 aa1.18□□□□□ -2.22
TRAPPC13-205ENST00000504243 C4AP0C0L4 1744 aa1.18□□□□□ -2.22
TRAPPC13-205ENST00000504243 LYNX1G3V0Z9 82 aa1.17□□□□□ -2.22
TRAPPC13-205ENST00000504243 SPINK9Q5DT21 86 aa1.17□□□□□ -2.22
TRAPPC13-205ENST00000504243 TOGARAM1Q9Y4F4 1720 aa1.17□□□□□ -2.22
TRAPPC13-205ENST00000504243 NSD1Q96L73 2696 aaPredicted RBP1.17□□□□□ -2.22
TRAPPC13-205ENST00000504243 DMXL1Q9Y485 3027 aa1.17□□□□□ -2.22
TRAPPC13-205ENST00000504243 MGAM2Q2M2H8 2515 aa1.17□□□□□ -2.22
TRAPPC13-205ENST00000504243 FREM2Q5SZK8 3169 aa1.16□□□□□ -2.22
TRAPPC13-205ENST00000504243 RIF1Q5UIP0 2472 aaKnown RBP1.16□□□□□ -2.22
TRAPPC13-205ENST00000504243 SYNE2Q8WXH0 6885 aaKnown RBP1.16□□□□□ -2.22
TRAPPC13-205ENST00000504243 COX6A2Q02221 97 aa1.16□□□□□ -2.22
TRAPPC13-205ENST00000504243 LINC00308Q8TCZ7 52 aa1.16□□□□□ -2.22
TRAPPC13-205ENST00000504243 CACNA1EQ15878 2313 aa1.16□□□□□ -2.22
TRAPPC13-205ENST00000504243 TNRC6CQ9HCJ0 1690 aaKnown RBP1.16□□□□□ -2.22
TRAPPC13-205ENST00000504243 MACF1Q9UPN3 7388 aaKnown RBP1.15□□□□□ -2.22
TRAPPC13-205ENST00000504243 CSMD2Q7Z408 3487 aa1.15□□□□□ -2.23
TRAPPC13-205ENST00000504243 FSIP2Q5CZC0 6907 aa1.15□□□□□ -2.23
TRAPPC13-205ENST00000504243 I3L2K1 104 aa1.15□□□□□ -2.23
TRAPPC13-205ENST00000504243 MINOS1Q5TGZ0 78 aa1.15□□□□□ -2.23
TRAPPC13-205ENST00000504243 SMIM2Q9BVW6 85 aa1.15□□□□□ -2.23
TRAPPC13-205ENST00000504243 NIPBLQ6KC79 2804 aaeCLIP1.15□□□□□ -2.23
TRAPPC13-205ENST00000504243 CNTRLQ7Z7A1 2325 aa1.15□□□□□ -2.23
TRAPPC13-205ENST00000504243 VPS13CQ709C8 3753 aa1.14□□□□□ -2.23
TRAPPC13-205ENST00000504243 DSPP15924 2871 aaKnown RBP1.14□□□□□ -2.23
TRAPPC13-205ENST00000504243 PRRC2CQ9Y520 2896 aaKnown RBP1.14□□□□□ -2.23
TRAPPC13-205ENST00000504243 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
TRAPPC13-205ENST00000504243 PRO0255Q9UI72 69 aa1.14□□□□□ -2.23
TRAPPC13-205ENST00000504243 TENM3Q9P273 2699 aa1.14□□□□□ -2.23
TRAPPC13-205ENST00000504243 DOPEY2Q9Y3R5 2298 aa1.14□□□□□ -2.23
TRAPPC13-205ENST00000504243 C6orf48Q9UBA6 75 aa1.13□□□□□ -2.23
TRAPPC13-205ENST00000504243 LAMA5O15230 3695 aa1.13□□□□□ -2.23
TRAPPC13-205ENST00000504243 IQGAP1P46940 1657 aa1.13□□□□□ -2.23
TRAPPC13-205ENST00000504243 LMO7Q8WWI1 1683 aa1.13□□□□□ -2.23
TRAPPC13-205ENST00000504243 KMT2AQ03164 3969 aa1.13□□□□□ -2.23
TRAPPC13-205ENST00000504243 C4BP0C0L5 1744 aa1.12□□□□□ -2.23
TRAPPC13-205ENST00000504243 CUBNO60494 3623 aa1.12□□□□□ -2.23
TRAPPC13-205ENST00000504243 C10orf95Q9H7T3 257 aa1.12□□□□□ -2.23
TRAPPC13-205ENST00000504243 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
TRAPPC13-205ENST00000504243 STAB2Q8WWQ8 2551 aa1.12□□□□□ -2.23
TRAPPC13-205ENST00000504243 ITPR2Q14571 2701 aa1.12□□□□□ -2.23
TRAPPC13-205ENST00000504243 MROH2BQ7Z745 1585 aa1.12□□□□□ -2.23
TRAPPC13-205ENST00000504243 F8P00451 2351 aa1.12□□□□□ -2.23
TRAPPC13-205ENST00000504243 OTOGQ6ZRI0 2925 aa1.12□□□□□ -2.23
TRAPPC13-205ENST00000504243 ATMQ13315 3056 aa1.12□□□□□ -2.23
TRAPPC13-205ENST00000504243 WNK1Q9H4A3 2382 aa1.11□□□□□ -2.23
TRAPPC13-205ENST00000504243 NDUFA1O15239 70 aa1.11□□□□□ -2.23
TRAPPC13-205ENST00000504243 Q5VSD8 79 aa1.11□□□□□ -2.23
TRAPPC13-205ENST00000504243 DUOX1Q9NRD9 1551 aa1.11□□□□□ -2.23
TRAPPC13-205ENST00000504243 APCP25054 2843 aa1.11□□□□□ -2.23
TRAPPC13-205ENST00000504243 TRIOO75962 3097 aa1.1□□□□□ -2.23
TRAPPC13-205ENST00000504243 CHD7Q9P2D1 2997 aa1.1□□□□□ -2.23
TRAPPC13-205ENST00000504243 RNF213Q63HN8 5207 aa1.1□□□□□ -2.23
TRAPPC13-205ENST00000504243 GCC2Q8IWJ2 1684 aa1.1□□□□□ -2.23
TRAPPC13-205ENST00000504243 DMXL2Q8TDJ6 3036 aa1.09□□□□□ -2.23
TRAPPC13-205ENST00000504243 AKAP9Q99996 3911 aa1.09□□□□□ -2.23
TRAPPC13-205ENST00000504243 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.09□□□□□ -2.23
TRAPPC13-205ENST00000504243 SSPOA2VEC9 5147 aa1.09□□□□□ -2.24
TRAPPC13-205ENST00000504243 DCHS2Q6V1P9 2916 aa1.09□□□□□ -2.24
TRAPPC13-205ENST00000504243 DMBT1Q9UGM3 2413 aaPredicted RBP1.08□□□□□ -2.24
TRAPPC13-205ENST00000504243 HECTD4Q9Y4D8 3996 aa1.08□□□□□ -2.24
TRAPPC13-205ENST00000504243 H3BUA1 57 aa1.08□□□□□ -2.24
TRAPPC13-205ENST00000504243 APLNQ9ULZ1 77 aa1.08□□□□□ -2.24
TRAPPC13-205ENST00000504243 WNK2Q9Y3S1 2297 aa1.08□□□□□ -2.24
TRAPPC13-205ENST00000504243 CLTCL1P53675 1640 aa1.07□□□□□ -2.24
TRAPPC13-205ENST00000504243 PLCE1Q9P212 2302 aa1.07□□□□□ -2.24
TRAPPC13-205ENST00000504243 HMCN2Q8NDA2 5059 aa1.07□□□□□ -2.24
TRAPPC13-205ENST00000504243 IAPPP10997 89 aa1.07□□□□□ -2.24
TRAPPC13-205ENST00000504243 SPRR1AP35321 89 aa1.07□□□□□ -2.24
TRAPPC13-205ENST00000504243 TFF3Q07654 80 aa1.07□□□□□ -2.24
TRAPPC13-205ENST00000504243 DEFB105AQ8NG35 78 aa1.07□□□□□ -2.24
TRAPPC13-205ENST00000504243 PTPRQQ9UMZ3 2332 aa1.07□□□□□ -2.24
TRAPPC13-205ENST00000504243 HIVEP1P15822 2718 aa1.07□□□□□ -2.24
TRAPPC13-205ENST00000504243 SVEP1Q4LDE5 3571 aa1.06□□□□□ -2.24
TRAPPC13-205ENST00000504243 H0YAA0 97 aa1.06□□□□□ -2.24
TRAPPC13-205ENST00000504243 WFDC13Q8IUB5 93 aa1.06□□□□□ -2.24
TRAPPC13-205ENST00000504243 ADGRG4Q8IZF6 3080 aa1.06□□□□□ -2.24
TRAPPC13-205ENST00000504243 ANK2Q01484 3957 aa1.06□□□□□ -2.24
TRAPPC13-205ENST00000504243 MAP1AP78559 2803 aaPredicted RBP1.05□□□□□ -2.24
TRAPPC13-205ENST00000504243 LOC730098B7Z3J9 87 aa1.05□□□□□ -2.24
TRAPPC13-205ENST00000504243 H1FX-AS1Q4G0G2 97 aa1.05□□□□□ -2.24
TRAPPC13-205ENST00000504243 CENPEQ02224 2701 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms