RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 COX6B2Q6YFQ2 88 aa2.84□□□□□ -1.95
NDFIP1-202ENST00000503388 J3QL48 77 aa2.83□□□□□ -1.96
NDFIP1-202ENST00000503388 KRTAP13-1Q8IUC0 172 aa2.83□□□□□ -1.96
NDFIP1-202ENST00000503388 SEC61BP60468 96 aaKnown RBP2.83□□□□□ -1.96
NDFIP1-202ENST00000503388 Q5VV11 94 aa2.83□□□□□ -1.96
NDFIP1-202ENST00000503388 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.82□□□□□ -1.96
NDFIP1-202ENST00000503388 CSAG1Q6PB30 78 aa2.82□□□□□ -1.96
NDFIP1-202ENST00000503388 Q6ZRN7 208 aaPredicted RBP2.82□□□□□ -1.96
NDFIP1-202ENST00000503388 KRTAP9-2Q9BYQ4 174 aa2.82□□□□□ -1.96
NDFIP1-202ENST00000503388 OXTP01178 125 aa2.82□□□□□ -1.96
NDFIP1-202ENST00000503388 ITPR3Q14573 2671 aa2.82□□□□□ -1.96
NDFIP1-202ENST00000503388 CFAP47Q6ZTR5 3102 aa2.81□□□□□ -1.96
NDFIP1-202ENST00000503388 Q6ZSA8 131 aa2.81□□□□□ -1.96
NDFIP1-202ENST00000503388 HRNRQ86YZ3 2850 aaPredicted RBP2.81□□□□□ -1.96
NDFIP1-202ENST00000503388 KRTAP1-5Q9BYS1 174 aa2.81□□□□□ -1.96
NDFIP1-202ENST00000503388 DNHD1Q96M86 4753 aa2.81□□□□□ -1.96
NDFIP1-202ENST00000503388 PRR26Q8N8Z3 221 aa2.81□□□□□ -1.96
NDFIP1-202ENST00000503388 KALRNO60229 2985 aa2.8□□□□□ -1.96
NDFIP1-202ENST00000503388 VCANP13611 3396 aa2.8□□□□□ -1.96
NDFIP1-202ENST00000503388 WDFY4Q6ZS81 3184 aa2.8□□□□□ -1.96
NDFIP1-202ENST00000503388 HELZ2Q9BYK8 2649 aaKnown RBP2.8□□□□□ -1.96
NDFIP1-202ENST00000503388 SPATA8Q6RVD6 105 aa2.79□□□□□ -1.96
NDFIP1-202ENST00000503388 SPINT4Q6UDR6 99 aa2.79□□□□□ -1.96
NDFIP1-202ENST00000503388 NBEAQ8NFP9 2946 aa2.79□□□□□ -1.96
NDFIP1-202ENST00000503388 LAMA1P25391 3075 aa2.79□□□□□ -1.96
NDFIP1-202ENST00000503388 S4R3F8 94 aa2.79□□□□□ -1.96
NDFIP1-202ENST00000503388 A0A0G2JQZ4 141 aa2.78□□□□□ -1.96
NDFIP1-202ENST00000503388 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
NDFIP1-202ENST00000503388 KRTAP9-6A0A140TA67 174 aa2.78□□□□□ -1.96
NDFIP1-202ENST00000503388 SPINK7P58062 85 aa2.78□□□□□ -1.96
NDFIP1-202ENST00000503388 ANAPC11Q9NYG5 84 aa2.78□□□□□ -1.96
NDFIP1-202ENST00000503388 OTOGQ6ZRI0 2925 aa2.78□□□□□ -1.96
NDFIP1-202ENST00000503388 SVEP1Q4LDE5 3571 aa2.78□□□□□ -1.97
NDFIP1-202ENST00000503388 HERC2O95714 4834 aa2.78□□□□□ -1.97
NDFIP1-202ENST00000503388 LINC01554Q52M75 96 aa2.77□□□□□ -1.97
NDFIP1-202ENST00000503388 C9orf92A6NGG3 77 aa2.77□□□□□ -1.97
NDFIP1-202ENST00000503388 LCE2CQ5TA81 110 aa2.77□□□□□ -1.97
NDFIP1-202ENST00000503388 RPL37P61927 97 aaKnown RBP2.77□□□□□ -1.97
NDFIP1-202ENST00000503388 FBN3Q75N90 2809 aa2.77□□□□□ -1.97
NDFIP1-202ENST00000503388 NOTCH2NLQ7Z3S9 236 aa2.76□□□□□ -1.97
NDFIP1-202ENST00000503388 KRTAP17-1Q9BYP8 105 aa2.76□□□□□ -1.97
NDFIP1-202ENST00000503388 CYSTM1Q9H1C7 97 aa2.76□□□□□ -1.97
NDFIP1-202ENST00000503388 Q8N1X5 172 aa2.76□□□□□ -1.97
NDFIP1-202ENST00000503388 CELSR3Q9NYQ7 3312 aa2.75□□□□□ -1.97
NDFIP1-202ENST00000503388 H1FX-AS1Q4G0G2 97 aa2.75□□□□□ -1.97
NDFIP1-202ENST00000503388 KRTAP10-1P60331 282 aa2.75□□□□□ -1.97
NDFIP1-202ENST00000503388 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
NDFIP1-202ENST00000503388 ATRQ13535 2644 aa2.74□□□□□ -1.97
NDFIP1-202ENST00000503388 M0QZ58 72 aa2.74□□□□□ -1.97
NDFIP1-202ENST00000503388 MGAQ8IWI9 3026 aa2.74□□□□□ -1.97
NDFIP1-202ENST00000503388 UNC79Q9P2D8 2635 aa2.74□□□□□ -1.97
NDFIP1-202ENST00000503388 DSPP15924 2871 aaKnown RBP2.74□□□□□ -1.97
NDFIP1-202ENST00000503388 VPS13AQ96RL7 3174 aa2.73□□□□□ -1.97
NDFIP1-202ENST00000503388 KRTAP7-1Q8IUC3 87 aa2.73□□□□□ -1.97
NDFIP1-202ENST00000503388 ROMO1P60602 79 aa2.73□□□□□ -1.97
NDFIP1-202ENST00000503388 PRRC2CQ9Y520 2896 aaKnown RBP2.73□□□□□ -1.97
NDFIP1-202ENST00000503388 CHD6Q8TD26 2715 aa2.73□□□□□ -1.97
NDFIP1-202ENST00000503388 A8MUU9 505 aa2.72□□□□□ -1.97
NDFIP1-202ENST00000503388 SMR3BP02814 79 aaPredicted RBP2.72□□□□□ -1.97
NDFIP1-202ENST00000503388 C20orf166-AS1Q96NR2 134 aa2.72□□□□□ -1.97
NDFIP1-202ENST00000503388 KRTAP4-8A0A0G2JLE6 195 aa2.72□□□□□ -1.97
NDFIP1-202ENST00000503388 MYCBP2O75592 4640 aa2.71□□□□□ -1.98
NDFIP1-202ENST00000503388 HECTD1Q9ULT8 2610 aa2.71□□□□□ -1.98
NDFIP1-202ENST00000503388 PANO1I0J062 215 aa2.71□□□□□ -1.98
NDFIP1-202ENST00000503388 CSMD1Q96PZ7 3565 aa2.7□□□□□ -1.98
NDFIP1-202ENST00000503388 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
NDFIP1-202ENST00000503388 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
NDFIP1-202ENST00000503388 KRTAP10-2P60368 255 aa2.7□□□□□ -1.98
NDFIP1-202ENST00000503388 Q5VSD8 79 aa2.7□□□□□ -1.98
NDFIP1-202ENST00000503388 APCP25054 2843 aa2.7□□□□□ -1.98
NDFIP1-202ENST00000503388 HYDINQ4G0P3 5121 aa2.69□□□□□ -1.98
NDFIP1-202ENST00000503388 CELSR1Q9NYQ6 3014 aa2.69□□□□□ -1.98
NDFIP1-202ENST00000503388 FLNCQ14315 2725 aa2.69□□□□□ -1.98
NDFIP1-202ENST00000503388 A6NN06 94 aa2.69□□□□□ -1.98
NDFIP1-202ENST00000503388 ZANQ9Y493 2812 aa2.69□□□□□ -1.98
NDFIP1-202ENST00000503388 CAMK2N1Q7Z7J9 78 aa2.68□□□□□ -1.98
NDFIP1-202ENST00000503388 R4GN34 69 aa2.68□□□□□ -1.98
NDFIP1-202ENST00000503388 ASPMQ8IZT6 3477 aa2.67□□□□□ -1.98
NDFIP1-202ENST00000503388 PCLOQ9Y6V0 5065 aa2.67□□□□□ -1.98
NDFIP1-202ENST00000503388 MAST4O15021 2626 aa2.67□□□□□ -1.98
NDFIP1-202ENST00000503388 TEP1Q99973 2627 aaKnown RBP2.67□□□□□ -1.98
NDFIP1-202ENST00000503388 GCN1Q92616 2671 aaKnown RBP2.67□□□□□ -1.98
NDFIP1-202ENST00000503388 KRTAP13-2Q52LG2 175 aa2.67□□□□□ -1.98
NDFIP1-202ENST00000503388 KRTAP4-7Q9BYR0 210 aa2.67□□□□□ -1.98
NDFIP1-202ENST00000503388 NSD1Q96L73 2696 aaPredicted RBP2.66□□□□□ -1.98
NDFIP1-202ENST00000503388 UTP20O75691 2785 aaKnown RBP2.66□□□□□ -1.98
NDFIP1-202ENST00000503388 MGAM2Q2M2H8 2515 aa2.66□□□□□ -1.98
NDFIP1-202ENST00000503388 FLNBO75369 2602 aaKnown RBP2.66□□□□□ -1.98
NDFIP1-202ENST00000503388 A0A0A0MQY5 61 aa2.65□□□□□ -1.99
NDFIP1-202ENST00000503388 KRTAP11-1Q8IUC1 163 aa2.65□□□□□ -1.99
NDFIP1-202ENST00000503388 A0A0D9SG42 100 aa2.64□□□□□ -1.99
NDFIP1-202ENST00000503388 BAHCC1Q9P281 2608 aa2.64□□□□□ -1.99
NDFIP1-202ENST00000503388 PP632Q6XCG6 107 aa2.64□□□□□ -1.99
NDFIP1-202ENST00000503388 LRP2P98164 4655 aa2.63□□□□□ -1.99
NDFIP1-202ENST00000503388 FREM2Q5SZK8 3169 aa2.63□□□□□ -1.99
NDFIP1-202ENST00000503388 KRTAP25-1Q3LHN0 102 aa2.62□□□□□ -1.99
NDFIP1-202ENST00000503388 SETXQ7Z333 2677 aaKnown RBP2.62□□□□□ -1.99
NDFIP1-202ENST00000503388 ZZEF1O43149 2961 aa2.61□□□□□ -1.99
NDFIP1-202ENST00000503388 KRTAP1-4P0C5Y4 121 aa2.61□□□□□ -1.99
NDFIP1-202ENST00000503388 ITPR2Q14571 2701 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms