RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 ATOX1O00244 68 aa9.24□□□□□ -0.93
LMNA-217ENST00000498722 SPINK1P00995 79 aa9.24□□□□□ -0.93
LMNA-217ENST00000498722 ANAPC13Q9BS18 74 aa9.23□□□□□ -0.93
LMNA-217ENST00000498722 DEFB116Q30KQ4 102 aa9.22□□□□□ -0.93
LMNA-217ENST00000498722 ASB16-AS1Q495Z4 193 aa9.22□□□□□ -0.93
LMNA-217ENST00000498722 Q8N9L7 120 aa9.21□□□□□ -0.94
LMNA-217ENST00000498722 A8MWP4 228 aa9.2□□□□□ -0.94
LMNA-217ENST00000498722 Q5XG85 94 aa9.2□□□□□ -0.94
LMNA-217ENST00000498722 Q96NJ1 140 aa9.2□□□□□ -0.94
LMNA-217ENST00000498722 LIMD2Q9BT23 127 aa9.2□□□□□ -0.94
LMNA-217ENST00000498722 K7EQZ3 153 aa9.19□□□□□ -0.94
LMNA-217ENST00000498722 NDUFB1O75438 58 aa9.19□□□□□ -0.94
LMNA-217ENST00000498722 IGLV7-46A0A075B6I9 117 aa9.16□□□□□ -0.94
LMNA-217ENST00000498722 PRR15Q8IV56 129 aa9.16□□□□□ -0.94
LMNA-217ENST00000498722 LRP2P98164 4655 aa9.16□□□□□ -0.94
LMNA-217ENST00000498722 RPS29P62273 56 aaKnown RBP9.15□□□□□ -0.94
LMNA-217ENST00000498722 SMIM20Q8N5G0 67 aa9.15□□□□□ -0.94
LMNA-217ENST00000498722 HCG22E2RYF7 251 aa9.13□□□□□ -0.95
LMNA-217ENST00000498722 LPAP08519 4548 aa9.12□□□□□ -0.95
LMNA-217ENST00000498722 FP248Q71RG6 208 aaPredicted RBP9.11□□□□□ -0.95
LMNA-217ENST00000498722 A0A1B0GVX0 72 aa9.08□□□□□ -0.96
LMNA-217ENST00000498722 SERP2Q8N6R1 65 aa9.08□□□□□ -0.96
LMNA-217ENST00000498722 TRAV7A0A075B6U4 112 aa9.06□□□□□ -0.96
LMNA-217ENST00000498722 COX7CP15954 63 aa9.06□□□□□ -0.96
LMNA-217ENST00000498722 TPRXLQ17RH7 258 aa9.06□□□□□ -0.96
LMNA-217ENST00000498722 C1orf195Q5TG92 126 aa9.05□□□□□ -0.96
LMNA-217ENST00000498722 CASC2Q6XLA1 102 aa9.05□□□□□ -0.96
LMNA-217ENST00000498722 UQCRQO14949 82 aa9.05□□□□□ -0.96
LMNA-217ENST00000498722 WFDC13Q8IUB5 93 aa9.05□□□□□ -0.96
LMNA-217ENST00000498722 IGHV6-1A0A0B4J1U7 121 aa9.04□□□□□ -0.96
LMNA-217ENST00000498722 MMP24-AS1A0A0U1RRL7 71 aa9.04□□□□□ -0.96
LMNA-217ENST00000498722 C8orf17Q9NRJ1 99 aa9.04□□□□□ -0.96
LMNA-217ENST00000498722 C8orf87E5RJ46 101 aa9.03□□□□□ -0.96
LMNA-217ENST00000498722 hDV103S1A0JD37 113 aa9.02□□□□□ -0.97
LMNA-217ENST00000498722 OCR1Q9BZK8 76 aa9□□□□□ -0.97
LMNA-217ENST00000498722 RNF213Q63HN8 5207 aa8.99□□□□□ -0.97
LMNA-217ENST00000498722 KRTAP13-3Q3SY46 172 aa8.99□□□□□ -0.97
LMNA-217ENST00000498722 CCDC179H3BU77 68 aa8.98□□□□□ -0.97
LMNA-217ENST00000498722 TMEM254Q8TBM7 123 aa8.97□□□□□ -0.97
LMNA-217ENST00000498722 LINC00313P59037 77 aa8.94□□□□□ -0.98
LMNA-217ENST00000498722 MRPL34Q9BQ48 92 aaKnown RBP8.94□□□□□ -0.98
LMNA-217ENST00000498722 TP53AIP1Q9HCN2 124 aa8.91□□□□□ -0.98
LMNA-217ENST00000498722 C9orf92A6NGG3 77 aa8.9□□□□□ -0.98
LMNA-217ENST00000498722 C5orf47Q569G3 176 aa8.9□□□□□ -0.98
LMNA-217ENST00000498722 NOTCH2NLQ7Z3S9 236 aa8.9□□□□□ -0.98
LMNA-217ENST00000498722 C20orf197Q8N268 126 aa8.88□□□□□ -0.99
LMNA-217ENST00000498722 NDUFS5O43920 106 aa8.86□□□□□ -0.99
LMNA-217ENST00000498722 MP68P56378 58 aa8.84□□□□□ -0.99
LMNA-217ENST00000498722 KLKP1Q107X0 134 aa8.84□□□□□ -0.99
LMNA-217ENST00000498722 XP32Q5T750 250 aa8.84□□□□□ -0.99
LMNA-217ENST00000498722 H3BPC8 53 aa8.82□□□□□ -1
LMNA-217ENST00000498722 A0A0U1RQV1 116 aa8.81□□□□□ -1
LMNA-217ENST00000498722 SEC61BP60468 96 aaKnown RBP8.81□□□□□ -1
LMNA-217ENST00000498722 TRAV22A0A0B4J277 110 aa8.8□□□□□ -1
LMNA-217ENST00000498722 KRTAP16-1A8MUX0 517 aa8.8□□□□□ -1
LMNA-217ENST00000498722 H0Y9P7 68 aa8.8□□□□□ -1
LMNA-217ENST00000498722 Q8N9P0 234 aaPredicted RBP8.8□□□□□ -1
LMNA-217ENST00000498722 NDUFC1O43677 76 aa8.8□□□□□ -1
LMNA-217ENST00000498722 SNURFQ9Y675 71 aa8.8□□□□□ -1
LMNA-217ENST00000498722 LINC00208Q96KT6 92 aa8.74□□□□□ -1.01
LMNA-217ENST00000498722 CYSTM1Q9H1C7 97 aa8.74□□□□□ -1.01
LMNA-217ENST00000498722 ZCCHC13Q8WW36 166 aaKnown RBP8.73□□□□□ -1.01
LMNA-217ENST00000498722 TMEM258P61165 79 aa8.72□□□□□ -1.01
LMNA-217ENST00000498722 C1orf64Q8NEQ6 169 aa8.71□□□□□ -1.02
LMNA-217ENST00000498722 MUC17Q685J3 4493 aa8.7□□□□□ -1.02
LMNA-217ENST00000498722 MUC2Q02817 5179 aa8.7□□□□□ -1.02
LMNA-217ENST00000498722 H7BZZ5 65 aa8.7□□□□□ -1.02
LMNA-217ENST00000498722 PCOTHQ58A44 107 aa8.7□□□□□ -1.02
LMNA-217ENST00000498722 LOC101927531A0A1B0GV80 90 aa8.66□□□□□ -1.02
LMNA-217ENST00000498722 RPL37P61927 97 aaKnown RBP8.66□□□□□ -1.02
LMNA-217ENST00000498722 C20orf166-AS1Q96NR2 134 aa8.66□□□□□ -1.02
LMNA-217ENST00000498722 A8MUU9 505 aa8.65□□□□□ -1.02
LMNA-217ENST00000498722 Q5W150 140 aa8.65□□□□□ -1.02
LMNA-217ENST00000498722 KRTAP4-1Q9BYQ7 146 aa8.64□□□□□ -1.03
LMNA-217ENST00000498722 ATP5EP56381 51 aaPredicted RBP8.63□□□□□ -1.03
LMNA-217ENST00000498722 FAM236DA0A1B0GTK5 79 aa8.61□□□□□ -1.03
LMNA-217ENST00000498722 FAM236CP0DP71 79 aa8.61□□□□□ -1.03
LMNA-217ENST00000498722 Q75L30 129 aa8.6□□□□□ -1.03
LMNA-217ENST00000498722 ATP11AUNQ6ZP68 121 aa8.57□□□□□ -1.04
LMNA-217ENST00000498722 IGKV2-30P06310 120 aa8.55□□□□□ -1.04
LMNA-217ENST00000498722 SPANXA2-OT1Q8N9U9 137 aa8.54□□□□□ -1.04
LMNA-217ENST00000498722 CYP4F30PQ9H0H9 118 aa8.54□□□□□ -1.04
LMNA-217ENST00000498722 C7orf65Q6ZTY9 151 aa8.5□□□□□ -1.05
LMNA-217ENST00000498722 IGKV2D-30A0A075B6S6 120 aa8.48□□□□□ -1.05
LMNA-217ENST00000498722 KRTAP9-2Q9BYQ4 174 aa8.46□□□□□ -1.06
LMNA-217ENST00000498722 FAT4Q6V0I7 4981 aa8.45□□□□□ -1.06
LMNA-217ENST00000498722 SERP1Q9Y6X1 66 aa8.45□□□□□ -1.06
LMNA-217ENST00000498722 RPS28P62857 69 aaKnown RBP8.44□□□□□ -1.06
LMNA-217ENST00000498722 HRES1P13985 223 aa8.41□□□□□ -1.06
LMNA-217ENST00000498722 LCE2AQ5TA79 106 aaPredicted RBP8.41□□□□□ -1.06
LMNA-217ENST00000498722 COX6B2Q6YFQ2 88 aa8.39□□□□□ -1.07
LMNA-217ENST00000498722 SPINK7P58062 85 aa8.36□□□□□ -1.07
LMNA-217ENST00000498722 KRTAP19-2Q3LHN2 52 aa8.34□□□□□ -1.07
LMNA-217ENST00000498722 LCE2CQ5TA81 110 aa8.33□□□□□ -1.08
LMNA-217ENST00000498722 DMAC1Q96GE9 116 aa8.31□□□□□ -1.08
LMNA-217ENST00000498722 ACYP2P14621 99 aa8.3□□□□□ -1.08
LMNA-217ENST00000498722 A8MUN3 132 aa8.27□□□□□ -1.09
LMNA-217ENST00000498722 MT1HP80294 61 aa8.26□□□□□ -1.09
LMNA-217ENST00000498722 COA5Q86WW8 74 aa8.26□□□□□ -1.09
LMNA-217ENST00000498722 KRTAP9-6A0A140TA67 174 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms