RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 UBE2V1Q13404 147 aa12.77□□□□□ -0.37
CUL4A-211ENST00000498562 C8orf87E5RJ46 101 aa12.75□□□□□ -0.37
CUL4A-211ENST00000498562 KRTAP10-10P60014 251 aa12.75□□□□□ -0.37
CUL4A-211ENST00000498562 A0A1B0GVX0 72 aa12.74□□□□□ -0.37
CUL4A-211ENST00000498562 KRTAP19-1Q8IUB9 90 aa12.73□□□□□ -0.37
CUL4A-211ENST00000498562 VPS25Q9BRG1 176 aa12.71□□□□□ -0.37
CUL4A-211ENST00000498562 PYY3Q5JQD4 70 aa12.68□□□□□ -0.38
CUL4A-211ENST00000498562 ZCCHC13Q8WW36 166 aaKnown RBP12.67□□□□□ -0.38
CUL4A-211ENST00000498562 RBM3P98179 157 aaKnown RBP12.66□□□□□ -0.38
CUL4A-211ENST00000498562 MTURNQ8N3F0 131 aa12.65□□□□□ -0.38
CUL4A-211ENST00000498562 DSCR8Q96T75 97 aa12.63□□□□□ -0.39
CUL4A-211ENST00000498562 SPINK7P58062 85 aa12.61□□□□□ -0.39
CUL4A-211ENST00000498562 J3KT08 172 aa12.6□□□□□ -0.39
CUL4A-211ENST00000498562 SCGB1C2P0DMR2 95 aa12.56□□□□□ -0.4
CUL4A-211ENST00000498562 C21orf62-AS1Q17RA5 79 aa12.56□□□□□ -0.4
CUL4A-211ENST00000498562 Q8N9P0 234 aaPredicted RBP12.56□□□□□ -0.4
CUL4A-211ENST00000498562 Q6ZQT0 140 aa12.55□□□□□ -0.4
CUL4A-211ENST00000498562 UQCR10Q9UDW1 63 aa12.55□□□□□ -0.4
CUL4A-211ENST00000498562 C9JAW5 83 aa12.54□□□□□ -0.4
CUL4A-211ENST00000498562 BAALC-AS2P0C853 105 aa12.51□□□□□ -0.41
CUL4A-211ENST00000498562 NDUFB1O75438 58 aa12.49□□□□□ -0.41
CUL4A-211ENST00000498562 C8orf17Q9NRJ1 99 aa12.47□□□□□ -0.41
CUL4A-211ENST00000498562 WFDC13Q8IUB5 93 aa12.46□□□□□ -0.41
CUL4A-211ENST00000498562 A8MWP4 228 aa12.44□□□□□ -0.42
CUL4A-211ENST00000498562 KRTAP19-6Q3LI70 58 aa12.42□□□□□ -0.42
CUL4A-211ENST00000498562 IGKV3D-7A0A0C4DH55 119 aa12.4□□□□□ -0.42
CUL4A-211ENST00000498562 MACF1Q9UPN3 7388 aaKnown RBP12.4□□□□□ -0.42
CUL4A-211ENST00000498562 LYRM7Q5U5X0 104 aa12.39□□□□□ -0.43
CUL4A-211ENST00000498562 LOC110117498A0A087WWA1 95 aa12.37□□□□□ -0.43
CUL4A-211ENST00000498562 A0A1B0GW54 56 aa12.37□□□□□ -0.43
CUL4A-211ENST00000498562 JMJD7-PLA2G4BH0Y9G9 81 aa12.37□□□□□ -0.43
CUL4A-211ENST00000498562 Q6ZVQ6 151 aa12.36□□□□□ -0.43
CUL4A-211ENST00000498562 LINC00846Q9NV44 126 aa12.36□□□□□ -0.43
CUL4A-211ENST00000498562 ATXN8Q156A1 80 aa12.33□□□□□ -0.44
CUL4A-211ENST00000498562 NAA38Q9BRA0 125 aaKnown RBP12.3□□□□□ -0.44
CUL4A-211ENST00000498562 PDE6GP18545 87 aa12.29□□□□□ -0.44
CUL4A-211ENST00000498562 PRR15Q8IV56 129 aa12.29□□□□□ -0.44
CUL4A-211ENST00000498562 SYNE2Q8WXH0 6885 aaKnown RBP12.28□□□□□ -0.44
CUL4A-211ENST00000498562 C14orf132Q9NPU4 83 aa12.28□□□□□ -0.44
CUL4A-211ENST00000498562 MMP24-AS1A0A0U1RRL7 71 aa12.25□□□□□ -0.45
CUL4A-211ENST00000498562 TMA7Q9Y2S6 64 aaKnown RBP12.25□□□□□ -0.45
CUL4A-211ENST00000498562 TMEM254Q8TBM7 123 aa12.24□□□□□ -0.45
CUL4A-211ENST00000498562 MRPL34Q9BQ48 92 aaKnown RBP12.24□□□□□ -0.45
CUL4A-211ENST00000498562 NREPQ16612 68 aa12.21□□□□□ -0.45
CUL4A-211ENST00000498562 M0R143 59 aa12.2□□□□□ -0.46
CUL4A-211ENST00000498562 H1FX-AS1Q4G0G2 97 aa12.2□□□□□ -0.46
CUL4A-211ENST00000498562 hDV103S1A0JD37 113 aa12.14□□□□□ -0.47
CUL4A-211ENST00000498562 K7EQZ3 153 aa12.13□□□□□ -0.47
CUL4A-211ENST00000498562 NDUFS5O43920 106 aa12.11□□□□□ -0.47
CUL4A-211ENST00000498562 IGKV2D-30A0A075B6S6 120 aa12.05□□□□□ -0.48
CUL4A-211ENST00000498562 IGKV2-30P06310 120 aa12.05□□□□□ -0.48
CUL4A-211ENST00000498562 Q5W150 140 aa12.03□□□□□ -0.48
CUL4A-211ENST00000498562 C7orf65Q6ZTY9 151 aa12.03□□□□□ -0.48
CUL4A-211ENST00000498562 KRTAP6-3Q3LI67 103 aa12.02□□□□□ -0.49
CUL4A-211ENST00000498562 BPY2O14599 106 aa11.96□□□□□ -0.49
CUL4A-211ENST00000498562 H3BT86 120 aa11.95□□□□□ -0.5
CUL4A-211ENST00000498562 C4orf26Q17RF5 130 aa11.89□□□□□ -0.51
CUL4A-211ENST00000498562 BATFQ16520 125 aa11.88□□□□□ -0.51
CUL4A-211ENST00000498562 Q8N9L7 120 aa11.88□□□□□ -0.51
CUL4A-211ENST00000498562 HCG22E2RYF7 251 aa11.87□□□□□ -0.51
CUL4A-211ENST00000498562 CASC2Q6XLA1 102 aa11.87□□□□□ -0.51
CUL4A-211ENST00000498562 SMIM6P0DI80 62 aa11.86□□□□□ -0.51
CUL4A-211ENST00000498562 C9orf118A6NHY6 69 aa11.82□□□□□ -0.52
CUL4A-211ENST00000498562 A0A1W2PPM0 123 aa11.79□□□□□ -0.52
CUL4A-211ENST00000498562 C5orf47Q569G3 176 aa11.79□□□□□ -0.52
CUL4A-211ENST00000498562 TSTD3H0UI37 97 aa11.78□□□□□ -0.52
CUL4A-211ENST00000498562 CXCL6P80162 114 aa11.78□□□□□ -0.52
CUL4A-211ENST00000498562 TAX1BP3O14907 124 aa11.77□□□□□ -0.53
CUL4A-211ENST00000498562 FAM236AA0A1B0GUQ0 79 aa11.74□□□□□ -0.53
CUL4A-211ENST00000498562 FAM236BA0A1B0GV22 79 aa11.74□□□□□ -0.53
CUL4A-211ENST00000498562 MT1BP07438 61 aa11.73□□□□□ -0.53
CUL4A-211ENST00000498562 KRTAP3-1Q9BYR8 98 aa11.73□□□□□ -0.53
CUL4A-211ENST00000498562 A6NN06 94 aa11.69□□□□□ -0.54
CUL4A-211ENST00000498562 S4R3F8 94 aa11.69□□□□□ -0.54
CUL4A-211ENST00000498562 Q5VV11 94 aa11.65□□□□□ -0.54
CUL4A-211ENST00000498562 KRTAP19-8Q3LI54 63 aa11.64□□□□□ -0.55
CUL4A-211ENST00000498562 SPRR2GQ9BYE4 73 aa11.64□□□□□ -0.55
CUL4A-211ENST00000498562 SMCPP49901 116 aaPredicted RBP11.62□□□□□ -0.55
CUL4A-211ENST00000498562 CSAG1Q6PB30 78 aa11.62□□□□□ -0.55
CUL4A-211ENST00000498562 LCA10Q71F78 164 aa11.62□□□□□ -0.55
CUL4A-211ENST00000498562 C1orf64Q8NEQ6 169 aa11.61□□□□□ -0.55
CUL4A-211ENST00000498562 MUC12Q9UKN1 5478 aa11.6□□□□□ -0.55
CUL4A-211ENST00000498562 SPCS1Q9Y6A9 102 aa11.59□□□□□ -0.55
CUL4A-211ENST00000498562 UBL5Q9BZL1 73 aa11.58□□□□□ -0.56
CUL4A-211ENST00000498562 NEBP20929 6669 aa11.56□□□□□ -0.56
CUL4A-211ENST00000498562 KRTAP10-5P60370 271 aa11.52□□□□□ -0.57
CUL4A-211ENST00000498562 KLKP1Q107X0 134 aa11.49□□□□□ -0.57
CUL4A-211ENST00000498562 PRO0461Q9UI25 63 aa11.47□□□□□ -0.57
CUL4A-211ENST00000498562 TP53AIP1Q9HCN2 124 aa11.45□□□□□ -0.58
CUL4A-211ENST00000498562 KRTAP3-3Q9BYR6 98 aa11.44□□□□□ -0.58
CUL4A-211ENST00000498562 LOC105371267A0A1B0GV96 52 aa11.36□□□□□ -0.59
CUL4A-211ENST00000498562 KRTAP5-9P26371 169 aa11.35□□□□□ -0.59
CUL4A-211ENST00000498562 K7EP34 96 aa11.33□□□□□ -0.6
CUL4A-211ENST00000498562 CYP4F30PQ9H0H9 118 aa11.31□□□□□ -0.6
CUL4A-211ENST00000498562 A0A087WVE0 104 aa11.29□□□□□ -0.6
CUL4A-211ENST00000498562 KRTAP20-1Q3LI63 56 aa11.29□□□□□ -0.6
CUL4A-211ENST00000498562 CRIPTQ9P021 101 aa11.28□□□□□ -0.6
CUL4A-211ENST00000498562 COL5A1-AS1Q5SY13 56 aa11.27□□□□□ -0.61
CUL4A-211ENST00000498562 KMT2DO14686 5537 aa11.25□□□□□ -0.61
CUL4A-211ENST00000498562 IMUPQ9GZP8 106 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms