RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 A0A1B0GVX0 72 aa7.46□□□□□ -1.22
CPNE1-227ENST00000498056 J3QR89 54 aa7.46□□□□□ -1.22
CPNE1-227ENST00000498056 DSCR10P59022 87 aa7.46□□□□□ -1.22
CPNE1-227ENST00000498056 A8MWP4 228 aa7.45□□□□□ -1.22
CPNE1-227ENST00000498056 NDUFB1O75438 58 aa7.45□□□□□ -1.22
CPNE1-227ENST00000498056 K7EQZ3 153 aa7.43□□□□□ -1.22
CPNE1-227ENST00000498056 XP32Q5T750 250 aa7.43□□□□□ -1.22
CPNE1-227ENST00000498056 IGKV3D-7A0A0C4DH55 119 aa7.42□□□□□ -1.22
CPNE1-227ENST00000498056 C8orf87E5RJ46 101 aa7.41□□□□□ -1.22
CPNE1-227ENST00000498056 Q8N9L7 120 aa7.41□□□□□ -1.22
CPNE1-227ENST00000498056 LINC00313P59037 77 aa7.4□□□□□ -1.22
CPNE1-227ENST00000498056 NOTCH2NLQ7Z3S9 236 aa7.39□□□□□ -1.23
CPNE1-227ENST00000498056 PRR15Q8IV56 129 aa7.39□□□□□ -1.23
CPNE1-227ENST00000498056 C8orf17Q9NRJ1 99 aa7.38□□□□□ -1.23
CPNE1-227ENST00000498056 K7ERU9 68 aa7.37□□□□□ -1.23
CPNE1-227ENST00000498056 CXCL6P80162 114 aa7.37□□□□□ -1.23
CPNE1-227ENST00000498056 ATP5EP2Q5VTU8 51 aa7.37□□□□□ -1.23
CPNE1-227ENST00000498056 UBR4Q5T4S7 5183 aa7.36□□□□□ -1.23
CPNE1-227ENST00000498056 MMP24-AS1A0A0U1RRL7 71 aa7.35□□□□□ -1.23
CPNE1-227ENST00000498056 KRTAP16-1A8MUX0 517 aa7.34□□□□□ -1.23
CPNE1-227ENST00000498056 RPL37P61927 97 aaKnown RBP7.33□□□□□ -1.24
CPNE1-227ENST00000498056 LINC00643Q86TS7 51 aa7.33□□□□□ -1.24
CPNE1-227ENST00000498056 MUC17Q685J3 4493 aa7.32□□□□□ -1.24
CPNE1-227ENST00000498056 WFDC13Q8IUB5 93 aa7.32□□□□□ -1.24
CPNE1-227ENST00000498056 Q75L30 129 aa7.31□□□□□ -1.24
CPNE1-227ENST00000498056 hDV103S1A0JD37 113 aa7.3□□□□□ -1.24
CPNE1-227ENST00000498056 SEC61BP60468 96 aaKnown RBP7.3□□□□□ -1.24
CPNE1-227ENST00000498056 HIST1H4AP62805 103 aaKnown RBP7.3□□□□□ -1.24
CPNE1-227ENST00000498056 C20orf166-AS1Q96NR2 134 aa7.3□□□□□ -1.24
CPNE1-227ENST00000498056 A8MUU9 505 aa7.29□□□□□ -1.24
CPNE1-227ENST00000498056 CASC2Q6XLA1 102 aa7.29□□□□□ -1.24
CPNE1-227ENST00000498056 TMEM254Q8TBM7 123 aa7.29□□□□□ -1.24
CPNE1-227ENST00000498056 HCG22E2RYF7 251 aa7.28□□□□□ -1.24
CPNE1-227ENST00000498056 PCOTHQ58A44 107 aa7.27□□□□□ -1.25
CPNE1-227ENST00000498056 MRPL34Q9BQ48 92 aaKnown RBP7.27□□□□□ -1.25
CPNE1-227ENST00000498056 NDUFS5O43920 106 aa7.26□□□□□ -1.25
CPNE1-227ENST00000498056 RNF213Q63HN8 5207 aa7.25□□□□□ -1.25
CPNE1-227ENST00000498056 ATP11AUNQ6ZP68 121 aa7.25□□□□□ -1.25
CPNE1-227ENST00000498056 A0A087WVE0 104 aa7.23□□□□□ -1.25
CPNE1-227ENST00000498056 Q8N9P0 234 aaPredicted RBP7.23□□□□□ -1.25
CPNE1-227ENST00000498056 MT-ATP8P03928 68 aa7.18□□□□□ -1.26
CPNE1-227ENST00000498056 ZCCHC13Q8WW36 166 aaKnown RBP7.18□□□□□ -1.26
CPNE1-227ENST00000498056 KRTAP4-1Q9BYQ7 146 aa7.14□□□□□ -1.27
CPNE1-227ENST00000498056 IMUPQ9GZP8 106 aa7.1□□□□□ -1.27
CPNE1-227ENST00000498056 MUC2Q02817 5179 aa7.08□□□□□ -1.28
CPNE1-227ENST00000498056 TP53AIP1Q9HCN2 124 aa7.08□□□□□ -1.28
CPNE1-227ENST00000498056 FAM236AA0A1B0GUQ0 79 aa7.06□□□□□ -1.28
CPNE1-227ENST00000498056 FAM236BA0A1B0GV22 79 aa7.06□□□□□ -1.28
CPNE1-227ENST00000498056 Q5W150 140 aa7.06□□□□□ -1.28
CPNE1-227ENST00000498056 SCGB1A1P11684 91 aa7.04□□□□□ -1.28
CPNE1-227ENST00000498056 IGKV2D-30A0A075B6S6 120 aa7.03□□□□□ -1.28
CPNE1-227ENST00000498056 TRAV22A0A0B4J277 110 aa7.03□□□□□ -1.28
CPNE1-227ENST00000498056 IGKV2-30P06310 120 aa7.03□□□□□ -1.28
CPNE1-227ENST00000498056 UQCRQO14949 82 aa7.01□□□□□ -1.29
CPNE1-227ENST00000498056 SPINK7P58062 85 aa7.01□□□□□ -1.29
CPNE1-227ENST00000498056 C7orf65Q6ZTY9 151 aa7.01□□□□□ -1.29
CPNE1-227ENST00000498056 A0A0U1RQV1 116 aa7□□□□□ -1.29
CPNE1-227ENST00000498056 OCR1Q9BZK8 76 aa6.99□□□□□ -1.29
CPNE1-227ENST00000498056 H0Y9P7 68 aa6.98□□□□□ -1.29
CPNE1-227ENST00000498056 HRES1P13985 223 aa6.96□□□□□ -1.3
CPNE1-227ENST00000498056 COX6B2Q6YFQ2 88 aa6.95□□□□□ -1.3
CPNE1-227ENST00000498056 ATOX1O00244 68 aa6.94□□□□□ -1.3
CPNE1-227ENST00000498056 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
CPNE1-227ENST00000498056 FAM236DA0A1B0GTK5 79 aa6.93□□□□□ -1.3
CPNE1-227ENST00000498056 FAM236CP0DP71 79 aa6.93□□□□□ -1.3
CPNE1-227ENST00000498056 MP68P56378 58 aa6.93□□□□□ -1.3
CPNE1-227ENST00000498056 RBM12B-AS1Q9P1G2 102 aa6.93□□□□□ -1.3
CPNE1-227ENST00000498056 LOC101927531A0A1B0GV80 90 aa6.92□□□□□ -1.3
CPNE1-227ENST00000498056 SMIM20Q8N5G0 67 aa6.91□□□□□ -1.3
CPNE1-227ENST00000498056 TRAV7A0A075B6U4 112 aa6.89□□□□□ -1.31
CPNE1-227ENST00000498056 KRTAP19-2Q3LHN2 52 aa6.89□□□□□ -1.31
CPNE1-227ENST00000498056 LINC00208Q96KT6 92 aa6.89□□□□□ -1.31
CPNE1-227ENST00000498056 C5orf47Q569G3 176 aa6.88□□□□□ -1.31
CPNE1-227ENST00000498056 C1orf64Q8NEQ6 169 aa6.88□□□□□ -1.31
CPNE1-227ENST00000498056 MPLKIPQ8TAP9 179 aa6.87□□□□□ -1.31
CPNE1-227ENST00000498056 CYP4F30PQ9H0H9 118 aa6.86□□□□□ -1.31
CPNE1-227ENST00000498056 C4orf26Q17RF5 130 aa6.84□□□□□ -1.31
CPNE1-227ENST00000498056 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
CPNE1-227ENST00000498056 H3BPC8 53 aa6.83□□□□□ -1.32
CPNE1-227ENST00000498056 SERP2Q8N6R1 65 aa6.82□□□□□ -1.32
CPNE1-227ENST00000498056 KLKP1Q107X0 134 aa6.79□□□□□ -1.32
CPNE1-227ENST00000498056 MT1HP80294 61 aa6.77□□□□□ -1.33
CPNE1-227ENST00000498056 FLGP20930 4061 aaPredicted RBP6.76□□□□□ -1.33
CPNE1-227ENST00000498056 C20orf197Q8N268 126 aa6.76□□□□□ -1.33
CPNE1-227ENST00000498056 ANAPC13Q9BS18 74 aa6.75□□□□□ -1.33
CPNE1-227ENST00000498056 SNURFQ9Y675 71 aa6.75□□□□□ -1.33
CPNE1-227ENST00000498056 M0R2T5 61 aa6.73□□□□□ -1.33
CPNE1-227ENST00000498056 COX7CP15954 63 aa6.72□□□□□ -1.33
CPNE1-227ENST00000498056 LCE2AQ5TA79 106 aaPredicted RBP6.72□□□□□ -1.33
CPNE1-227ENST00000498056 H1FX-AS1Q4G0G2 97 aa6.71□□□□□ -1.34
CPNE1-227ENST00000498056 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
CPNE1-227ENST00000498056 S4R3F8 94 aa6.64□□□□□ -1.35
CPNE1-227ENST00000498056 A8MUN3 132 aa6.62□□□□□ -1.35
CPNE1-227ENST00000498056 DMAC1Q96GE9 116 aa6.6□□□□□ -1.35
CPNE1-227ENST00000498056 CCDC179H3BU77 68 aa6.58□□□□□ -1.36
CPNE1-227ENST00000498056 LCA10Q71F78 164 aa6.58□□□□□ -1.36
CPNE1-227ENST00000498056 CYSTM1Q9H1C7 97 aa6.58□□□□□ -1.36
CPNE1-227ENST00000498056 KRTAP10-6P60371 365 aaPredicted RBP6.57□□□□□ -1.36
CPNE1-227ENST00000498056 NDUFC1O43677 76 aa6.55□□□□□ -1.36
CPNE1-227ENST00000498056 SPANXA2-OT1Q8N9U9 137 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms