RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ZNF73O43830 326 aaPredicted RBP1.24□□□□□ -2.21
RIF1-212ENST00000498041 SPRR1AP35321 89 aa1.24□□□□□ -2.21
RIF1-212ENST00000498041 CIRBPQ14011 172 aaKnown RBP1.24□□□□□ -2.21
RIF1-212ENST00000498041 KRTAP6-3Q3LI67 103 aa1.24□□□□□ -2.21
RIF1-212ENST00000498041 C1orf137Q5JT78 98 aa1.24□□□□□ -2.21
RIF1-212ENST00000498041 RETNLBQ9BQ08 111 aa1.24□□□□□ -2.21
RIF1-212ENST00000498041 HIGD2AQ9BW72 106 aa1.24□□□□□ -2.21
RIF1-212ENST00000498041 CYSTM1Q9H1C7 97 aa1.24□□□□□ -2.21
RIF1-212ENST00000498041 LINC00846Q9NV44 126 aa1.24□□□□□ -2.21
RIF1-212ENST00000498041 DNAH8Q96JB1 4490 aa1.23□□□□□ -2.21
RIF1-212ENST00000498041 DMBT1Q9UGM3 2413 aaPredicted RBP1.23□□□□□ -2.21
RIF1-212ENST00000498041 hADV29S1A0JD25 119 aa1.23□□□□□ -2.21
RIF1-212ENST00000498041 C3orf84H3BNL1 204 aa1.23□□□□□ -2.21
RIF1-212ENST00000498041 NDUFC2O95298 119 aa1.23□□□□□ -2.21
RIF1-212ENST00000498041 IGLV7-43P04211 117 aa1.23□□□□□ -2.21
RIF1-212ENST00000498041 CNBPP62633 177 aaKnown RBP1.23□□□□□ -2.21
RIF1-212ENST00000498041 UBE2BP63146 152 aa1.23□□□□□ -2.21
RIF1-212ENST00000498041 RBM3P98179 157 aaKnown RBP1.23□□□□□ -2.21
RIF1-212ENST00000498041 ATXN8Q156A1 80 aa1.23□□□□□ -2.21
RIF1-212ENST00000498041 KRTAP20-1Q3LI63 56 aa1.23□□□□□ -2.21
RIF1-212ENST00000498041 ADM2Q7Z4H4 148 aa1.23□□□□□ -2.21
RIF1-212ENST00000498041 OBSCN-AS1Q96MR7 158 aa1.23□□□□□ -2.21
RIF1-212ENST00000498041 VPS25Q9BRG1 176 aa1.23□□□□□ -2.21
RIF1-212ENST00000498041 KCNQ1DNQ9H478 68 aa1.23□□□□□ -2.21
RIF1-212ENST00000498041 FRAS1Q86XX4 4008 aa1.23□□□□□ -2.21
RIF1-212ENST00000498041 DNAH6Q9C0G6 4158 aa1.22□□□□□ -2.21
RIF1-212ENST00000498041 TRAV13-2A0A0B4J235 113 aa1.22□□□□□ -2.21
RIF1-212ENST00000498041 ELOF1P60002 83 aaKnown RBP1.22□□□□□ -2.21
RIF1-212ENST00000498041 SMAGPQ0VAQ4 97 aa1.22□□□□□ -2.21
RIF1-212ENST00000498041 COX17Q14061 63 aa1.22□□□□□ -2.21
RIF1-212ENST00000498041 LUZP6Q538Z0 58 aa1.22□□□□□ -2.21
RIF1-212ENST00000498041 DIRC1Q969H9 104 aa1.22□□□□□ -2.21
RIF1-212ENST00000498041 SIGMAR1Q99720 223 aa1.22□□□□□ -2.21
RIF1-212ENST00000498041 PLAC8Q9NZF1 115 aa1.22□□□□□ -2.21
RIF1-212ENST00000498041 SACSQ9NZJ4 4579 aa1.22□□□□□ -2.21
RIF1-212ENST00000498041 SRRM2Q9UQ35 2752 aaKnown RBP1.22□□□□□ -2.21
RIF1-212ENST00000498041 F8W1H4 67 aa1.21□□□□□ -2.22
RIF1-212ENST00000498041 Q6ZQT0 140 aa1.21□□□□□ -2.22
RIF1-212ENST00000498041 Q6ZRX8 168 aa1.21□□□□□ -2.22
RIF1-212ENST00000498041 Q6ZSA8 131 aa1.21□□□□□ -2.22
RIF1-212ENST00000498041 GTF2H5Q6ZYL4 71 aa1.21□□□□□ -2.22
RIF1-212ENST00000498041 TEN1Q86WV5 123 aa1.21□□□□□ -2.22
RIF1-212ENST00000498041 PPDPFLQ8WWR9 84 aa1.21□□□□□ -2.22
RIF1-212ENST00000498041 SPRR4Q96PI1 79 aa1.21□□□□□ -2.22
RIF1-212ENST00000498041 ORMDL1Q9P0S3 153 aa1.21□□□□□ -2.22
RIF1-212ENST00000498041 LAMTOR3Q9UHA4 124 aa1.21□□□□□ -2.22
RIF1-212ENST00000498041 FAT2Q9NYQ8 4349 aa1.2□□□□□ -2.22
RIF1-212ENST00000498041 DYNC1H1Q14204 4646 aaKnown RBP1.2□□□□□ -2.22
RIF1-212ENST00000498041 DNAH5Q8TE73 4624 aa1.2□□□□□ -2.22
RIF1-212ENST00000498041 TRBV20-1A0A075B6N2 111 aa1.2□□□□□ -2.22
RIF1-212ENST00000498041 ETDCA0A1B0GVM5 59 aa1.2□□□□□ -2.22
RIF1-212ENST00000498041 CCDC179H3BU77 68 aa1.2□□□□□ -2.22
RIF1-212ENST00000498041 BCE1O60756 84 aa1.2□□□□□ -2.22
RIF1-212ENST00000498041 TRACP01848 142 aa1.2□□□□□ -2.22
RIF1-212ENST00000498041 CCKP06307 115 aa1.2□□□□□ -2.22
RIF1-212ENST00000498041 INAFM2P0DMQ5 153 aa1.2□□□□□ -2.22
RIF1-212ENST00000498041 SPINK6Q6UWN8 80 aa1.2□□□□□ -2.22
RIF1-212ENST00000498041 LINC01600Q96MT4 127 aa1.2□□□□□ -2.22
RIF1-212ENST00000498041 Q96NJ1 140 aa1.2□□□□□ -2.22
RIF1-212ENST00000498041 HECTD4Q9Y4D8 3996 aa1.19□□□□□ -2.22
RIF1-212ENST00000498041 IGLV5-48A0A075B6I7 105 aa1.19□□□□□ -2.22
RIF1-212ENST00000498041 TRBV7-6A0A0J9YX20 115 aa1.19□□□□□ -2.22
RIF1-212ENST00000498041 TRBV7-4A0A0J9YYF1 115 aa1.19□□□□□ -2.22
RIF1-212ENST00000498041 H0YGX0 51 aa1.19□□□□□ -2.22
RIF1-212ENST00000498041 MT1HL1P0DM35 61 aa1.19□□□□□ -2.22
RIF1-212ENST00000498041 HRES1P13985 223 aa1.19□□□□□ -2.22
RIF1-212ENST00000498041 KRTAP4-1Q9BYQ7 146 aa1.19□□□□□ -2.22
RIF1-212ENST00000498041 LRP1BQ9NZR2 4599 aa1.19□□□□□ -2.22
RIF1-212ENST00000498041 KMT2DO14686 5537 aa1.19□□□□□ -2.22
RIF1-212ENST00000498041 PKHD1L1Q86WI1 4243 aa1.18□□□□□ -2.22
RIF1-212ENST00000498041 A0A087WSZ3 146 aa1.18□□□□□ -2.22
RIF1-212ENST00000498041 A0A1B0GX51 115 aa1.18□□□□□ -2.22
RIF1-212ENST00000498041 C9orf92A6NGG3 77 aa1.18□□□□□ -2.22
RIF1-212ENST00000498041 H3BT86 120 aa1.18□□□□□ -2.22
RIF1-212ENST00000498041 K7EQZ3 153 aa1.18□□□□□ -2.22
RIF1-212ENST00000498041 SPRR1BP22528 89 aa1.18□□□□□ -2.22
RIF1-212ENST00000498041 C9orf153Q5TBE3 101 aa1.18□□□□□ -2.22
RIF1-212ENST00000498041 Q5VSD8 79 aa1.18□□□□□ -2.22
RIF1-212ENST00000498041 WFDC13Q8IUB5 93 aa1.18□□□□□ -2.22
RIF1-212ENST00000498041 OXTP01178 125 aa1.17□□□□□ -2.22
RIF1-212ENST00000498041 COX6CP09669 75 aa1.17□□□□□ -2.22
RIF1-212ENST00000498041 LINC00472Q9H8W2 130 aa1.17□□□□□ -2.22
RIF1-212ENST00000498041 R4GN34 69 aa1.17□□□□□ -2.22
RIF1-212ENST00000498041 LOC110117498A0A087WWA1 95 aa1.16□□□□□ -2.22
RIF1-212ENST00000498041 TMEM256-PLSCR3K7ERE1 68 aa1.16□□□□□ -2.22
RIF1-212ENST00000498041 PSPHP1O15172 72 aa1.16□□□□□ -2.22
RIF1-212ENST00000498041 DNAL4O96015 105 aa1.16□□□□□ -2.22
RIF1-212ENST00000498041 HIST1H4AP62805 103 aaKnown RBP1.16□□□□□ -2.22
RIF1-212ENST00000498041 C1orf195Q5TG92 126 aa1.16□□□□□ -2.22
RIF1-212ENST00000498041 Q6JHZ5 121 aa1.16□□□□□ -2.22
RIF1-212ENST00000498041 SNURFQ9Y675 71 aa1.16□□□□□ -2.22
RIF1-212ENST00000498041 FAT3Q8TDW7 4589 aa1.16□□□□□ -2.22
RIF1-212ENST00000498041 APOBP04114 4563 aaKnown RBP1.15□□□□□ -2.22
RIF1-212ENST00000498041 TRBV7-7A0A0K0K1E9 115 aa1.15□□□□□ -2.23
RIF1-212ENST00000498041 MMP24-AS1A0A0U1RRL7 71 aa1.15□□□□□ -2.23
RIF1-212ENST00000498041 FAM236AA0A1B0GUQ0 79 aa1.15□□□□□ -2.23
RIF1-212ENST00000498041 FAM236BA0A1B0GV22 79 aa1.15□□□□□ -2.23
RIF1-212ENST00000498041 KLKP1Q107X0 134 aa1.15□□□□□ -2.23
RIF1-212ENST00000498041 LINC00336Q6ZUF6 198 aa1.15□□□□□ -2.23
RIF1-212ENST00000498041 FLG2Q5D862 2391 aaPredicted RBP1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms